| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | TrimmedAssembly_T66_contig_28 | 1 = | 0 (0.000) | 256 (0.430) | 75/258 | 0.2 | 100% | intergenic (–/+125) | –/rasttk_feature_creation_tool=RNA_reps_LSU_rRNA | –/LSU rRNA ## 23S rRNA, large subunit ribosomal RNA |
| ? | TrimmedAssembly_T66_contig_4 | = 245870 | 0 (0.000) | intergenic (‑69/–) | rasttk_feature_creation_tool=tRNAscan‑SE/– | tRNA‑Asn‑GTT/– | |||||
Only 100 of 256 total aligned reads displayed.
ACTTAACCAAGTAATTGGTGTTCCGGTTCATATGAAGATATTTGATATTGTCTAGTTTTGAGAGCACAAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < TrimmedAssembly_T66_contig_28/135‑1‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTCCGACATAGCTCAGTTGGTAGAGCGCTTGACTGTTAATCAAGATGTCGACGGTTCGAGCCCGCC < TrimmedAssembly_T66_contig_4/245870‑245737 ACTTAACCAAGTAATTGGTGTTCCGGTTCATATGAAGATATTTGATATTGTCTAGTTTTGAGAGCACAAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTA > 1:41696/1‑136ACTTAACCAAGTAATTGGTGTTCCGGTTCATATGAAGATATTTGATATTGTCTAGTTTTGAGAGCACAAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTA > 2:2418323/1‑136 TTAACCAAGTAATTGGTGTTCCGGTTCATATGAAGATATTTGATATTGTCTAGTTTTGAGAGCACAAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAA > 1:1380829/1‑135 ACCAAGTAATTGGTGTTCCGGTTCATATGAAGATATTTGATATTGTCTAGTTTTGAGAGCACAAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTT < 1:1020667/136‑1 CCAAGTAATTGGTGTTCCGGTTCATATGAAGATATTTGATATTGTCTAGTTTTGAGAGCACAAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTC < 2:1777325/136‑1 CCAAGTAATTGGTGTTCCGGTTCATATGAAGATATTTGATATTGTCTAGTTTTGAGAGCACAAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTC < 2:1891347/136‑1 CCAAGTAATTGGTGTTCCGGTTCATATGAAGATATTTGATATTGTCTAGTTTTGAGAGCACAAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTC < 1:1627808/136‑1 CAAGTAATTGGTGTTCCGGTTCATATGAAGATATTTGATATTGTCTAGTTTTGAGAGCACAAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCT > 2:2364291/1‑136 CAAGTAATTGGTGTTCCGGTTCATATGAAGATATTTGATATTGTCTAGTTTTGAGAGCACAAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCT > 2:137225/1‑136 CAAGTAATTGGTGTTCCGGTTCATATGAAGATATTTGATATTGTCTAGTTTTGAGAGCACAAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCT > 2:105620/1‑136 CAAGTAATTGGTGTTCCGGTTCATATGAAGATATTTGATATTGTCTAGTTTTGAGAGCACAAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCT > 2:204063/1‑136 CAAGTAATTGGTGTTCCGGTTCATATGAAGATATTTGATATTGTCTAGTTTTGAGAGCACAAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCT > 1:2210005/1‑136 CAAGTAATTGGTGTTCCGGTTCATATGAAGATATTTGATATTGTCTAGTTTTGAGAGCACAAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCT > 2:363840/1‑136 CAAGTAATTGGTGTTCCGGTTCATATGAAGATATTTGATATTGTCTAGTTTTGAGAGCACAAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCT > 1:1898462/1‑136 CAAGTAATTGGTGTTCCGGTTCATATGAAGATATTTGATATTGTCTAGTTTTGAGAGCACAAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCT > 1:1256497/1‑136 CAAGTAATTGGTGTTCCGGTTCATATGAAGATATTTGATATTGTCTAGTTTTGAGAGCACAAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCT > 1:1069159/1‑136 CAAGTAATTGGTGTTCCGGTTCATATGAAGATATTTGATATTGTCTAGTTTTGAGAGCACAAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCCTCT > 1:37738/1‑136 CAAGTAATTGGTGTTCCGGTTCATATGAAGATATTTGATATTGTCTAGTTTTGAGAGCACAAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGC > 2:841246/1‑132 CAAGTAATAGGTGTTCCGGTTCATATGAAGATATTAGATAATGTCAAGTTTAGAGAGCACAACTTACTCAATAGTGTGGTGACGATGGCGAGAAGGAAACACCTGTTCCCAAGACGAACACAGAAGTTAAGCTTCT > 2:406211/1‑136 AATTGGTGTTCCGGTTCATATGAAGATATTTGATATTGTCTAGTTTTGAGAGCACAAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGC < 1:1697889/135‑1 AATTGGTGTTCCGGTTCATATGAAGATATTTGATATTGTCTAGTTTTGAGAGCACAAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGC > 2:927094/1‑135 TTGGTGTTCCGGTTCATATGAAGATATTTGATATTGTCTAGTTTTGAGAGCACAAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCC < 2:1405505/136‑1 TGGTGTTCCGGTTCATATGAAGATATTTGATATTGTCTAGTTTTGAGAGCACAAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCG < 2:1454531/136‑1 GGTGTTCCGGTTCATATGAAGATATTTGATATTGTCTAGTTTTGAGAGCACAAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGA < 1:101211/136‑1 CGGTTCATATGAAGATATTTGATATTGTCTAGTTTTGAGAGCACAAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGT > 2:152984/1‑136 TTCATATGAAGATATTTGATATTGTCTAGTTTTGAGAGCACAAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGG > 1:347805/1‑136 TATGAAGATATTTGATATTGTCTAGTTTTGAGAGCACAAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGA < 2:1546149/136‑1 TATGAAGATATTTGATATTGTCTAGTTTTGAGAGCACAAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGA < 1:1135136/136‑1 ATGAAGATATTTGATATTGTCTAGTTTTGAGAGCACAAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGC < 2:2115591/118‑1 TGAAGATATTTGATATTGTCTAGTTTTGAGAGCACAAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATC < 1:207704/136‑1 GAAGATATTTGATATTGTCTAGTTTTGAGAGCACAAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCG < 1:1947609/136‑1 TATTTGATATTGTCTAGTTTTGAGAGCACAAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCC < 1:65049/136‑1 TATTTGATATTGTCTAGTTTTGAGAGCACAAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCC < 1:2289899/136‑1 TATTTGATATTGTCTAGTTTTGAGAGCACAAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCC < 1:2313418/136‑1 TATTTGATATTGTCTAGTTTTGAGAGCACAAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCC < 1:2037945/136‑1 TATTTGATATTGTCTAGTTTTGAGAGCACAAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTC > 1:1598218/1‑134 ATTTGATATTGTCTAGTTTTGAGAGCACAAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCT < 1:568589/136‑1 ATTTGATATTGTCTAGTTTTGAGAGCACAAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCT < 1:1521696/136‑1 ATTTGATATTGTCTAGTTTTGAGAGCACAAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCT < 1:964694/136‑1 ATTTGATATTGTCTAGTTTTGAGAGCACAAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCT < 2:617927/136‑1 ATTTGATATTGTCTAGTTTTGAGAGCACAAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTC > 2:1309023/1‑133 ATTTGATAGTGTCTAGTTTTGAGAGCACAAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCT < 2:858811/136‑1 TGATATTGTCTAGTTTTGAGAGCACAAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCG > 1:1112405/1‑136 ATATTGTCTAGTTTTGAGAGCACAAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAG > 2:1181644/1‑136 CTAGTTTTGAGAGCACAAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGA < 1:1358971/136‑1 AGTTTTGAGAGCACAAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACG > 2:1771500/1‑136 GCACAAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCG > 2:1148244/1‑136 GCACAAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCG > 1:2453555/1‑136 GCACAAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCG > 1:1774102/1‑136 GCACAAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGC < 1:2024916/135‑1 GCACAAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGC < 2:1258926/135‑1 AAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTAGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTCGCCATGCGAaat > 1:1146325/1‑133 TCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTCCG < 1:153782/136‑1 CAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTCCGACA > 2:1837549/1‑136 AATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTCCGACAT < 2:1598218/136‑1 AATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTCCGACAT < 1:27373/136‑1 AATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTCCGACAT < 1:2439490/136‑1 AATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTCCGACAT < 1:2097330/136‑1 TAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTCCGACATAG < 2:954496/136‑1 GTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTCCGACATAGCTC < 1:927094/135‑1 GTGGTGACGATGGCGAGAAGGATACACCTGGTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTCCGACATAGCTC < 1:715027/135‑1 GGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTCCGACATAGCTCAGT > 1:1186455/1‑136 GGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTCCGACATAGCTCAGT > 1:815088/1‑136 GACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTTCGACATAGCTCAGTTG < 1:254402/135‑1 GACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTCCGACATAGCTCAGTTG < 2:1399950/135‑1 CGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTCCGACATAGCTCAGTTGGTc > 2:705509/1‑135 CGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTCCGACATAGCTCAGTTGGTA < 1:1309023/136‑1 CGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTCCGACATAGCTCAGTTGGTA > 1:2432510/1‑136 CGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTCCGACATAGCTCAGTTGGT < 1:890227/135‑1 ATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTCCGACATAGCTCAGTTGGTAGA > 2:1652213/1‑136 GCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTCCGACATAGCTCAGTTGGTAGAGC > 2:1177087/1‑135 GAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTCCGACATAGCTCAGTTGGTAGAGCGCT > 2:2457409/1‑136 ACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTCCGACATAGCTCAGTTGGTAGAGCGCTTGACTGTTA < 2:2349106/136‑1 ACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTCCGACATAGCTCAGTTGGTAGAGCGCTTGACTGTTAA > 2:563667/1‑135 ACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTCCGACAT > 2:1989356/1‑105 CTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTCCGACATAGCTCAGTTGGTAGAGCGCTTGACTGTTAATCA > 1:2369275/1‑136 TTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTCCGACATAGCTCAGTTGGTAGAGCGCTTGACTGTTAATCAAGA > 1:502003/1‑136 CCATGTCGAACACAGAAGTTCAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTCCGACATAGCTCAGTTGGTAGAGCGCTTGACTGTTAATCAAGATGT < 1:1813069/136‑1 CCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTCCGACATAGCTCAGTTGGTAGAGCGCTTGACTGTTAATCAAGATGT < 2:1921075/136‑1 CCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTCCGACATAGCTCAGTTGGTAGAGCGCTTGACTGTTAATCAAGATGT < 2:2015540/136‑1 CCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTCCGACATAGCTCAGTTGGTAGAGCGCTTGACTGTTAATCAAGATGT < 2:1018594/136‑1 CCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTCCGACATAGCTCAGTTGGTAGAGCGCTTGACTGTTAATCAAGATG > 1:2189592/1‑135 CCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTCCGACATAGCTCAGTTGGTAGAGCGCTTGACTGTTAATCAAGATG > 2:922031/1‑135 CCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTCCGACATAGCTCAGTTGGTAGAGCGCTTGACTGTTAATCAAGATG > 2:354970/1‑135 CCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTCCGACATAGCTCAGTTGGTAGAGCGCTTGACTGTTAATCAAGATG > 1:1986305/1‑135 CCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTCCGACATAGCTCAGTTGGTAGAGCGCTTGACTGTTAATCAAGATG > 2:518466/1‑135 CCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTCCGACATAGCTCAGTTGGTAGAGCGCTT > 2:1107202/1‑118 CCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTCCGACATAGCTCAGTTGGTA > 2:219103/1‑110 CCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGA < 2:2052529/64‑1 CCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGA > 1:2052529/1‑64 CCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCC < 2:1351487/59‑1 ATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTCCGACATAGCTCAGTTGGTAGAGCGCTTGACTGTTAATCAAGATGTCG > 1:526587/1‑136 ATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGGTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTCCGACATAGCTCAGTTGCTAGAGCGCTTGACTGTTAATCAAGATGTCG > 2:1703493/1‑136 TCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTCCGACATAGCTCAGTTGGTAGAGCGCTTGACTGTTAATCAAGATGTCGACG > 1:1734773/1‑136 TCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTCCGACATAGCTCAGTTGGTAGAGCGCTTGACTGTTAATCAAGATGTCGACG > 2:2328977/1‑136 GAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGTTTATTCCGACATAGCTCGGTTGGTAGAGCGCTGGACTGTTAATCAAGATGTCGACGGT > 1:1973405/1‑136 TTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTCCGACATAGCTCAGTTGGTAGAGCGCTTGACTGTTAATCAAGATGT > 1:379142/1‑118 TAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTCCGACATAGCTCAGTTGGTAGAGCGCTTGACTGTTAATCAAGATGTCGACGGTTCGAGCCCGCC < 2:457370/135‑1 TAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTCCGACATAGCTCAGTTGGTAGAGCGCTTGACTGTTAATCAAGATGTCGACGGTTCGAGCCCGCC < 1:1837549/135‑1 TAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTCCGACATAGCTCAGTTGGTAGAGCGCTTGACTGTTAATCAAGATGTCGACGGTTCGAGCCCGCC < 2:431557/135‑1 ACTTAACCAAGTAATTGGTGTTCCGGTTCATATGAAGATATTTGATATTGTCTAGTTTTGAGAGCACAAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < TrimmedAssembly_T66_contig_28/135‑1‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTCCGACATAGCTCAGTTGGTAGAGCGCTTGACTGTTAATCAAGATGTCGACGGTTCGAGCCCGCC < TrimmedAssembly_T66_contig_4/245870‑245737 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |