| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | TrimmedAssembly_T66_contig_28 | 1 = | 0 (0.000) | 256 (0.430) | 75/258 | 0.2 | 100% | intergenic (–/+125) | –/rasttk_feature_creation_tool=RNA_reps_LSU_rRNA | –/LSU rRNA ## 23S rRNA, large subunit ribosomal RNA |
| ? | TrimmedAssembly_T66_contig_4 | = 245870 | 0 (0.000) | intergenic (‑69/–) | rasttk_feature_creation_tool=tRNAscan‑SE/– | tRNA‑Asn‑GTT/– | |||||
Only 100 of 746 total aligned reads displayed.
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCAAATATCTTCATATGAACCGGAACACCAATTACTTGGTTAAGT > TrimmedAssembly_T66_contig_28/1‑135 | ggcgggctcgaaccgtcgacatcttgattaacagtcaagcgctctaccaactgagctatgtcggaataatcgcatggcaacgtcctaccctcgcagggagcgatcccccaactactctcggcgccaagaagctta < 2:431557‑M1/1‑1 (MQ=255) ctcgaaccgtcgacatcttgattaacagtcaagcgctctaccaactgagctatgtcggaataatcgcatggcaccggcctaccctcgcagggagcgatcccccagctactctcggcgccaagaagcttagct < 1:2172694‑M1/4‑4 (MQ=255) ctcgaaccgtcgacatcttgattaacagtcaagcgctctaccaactgagctatgtcggaataatcgcatggcaacgtcctaccctcgcagggagcgatcccccaactactctcggcgccaagaagcttAACt < 1:2285108‑M1/4‑1 (MQ=255) gtcgacatcttgattaacagtcaagcgctctaccaactgagctatgtcggaataatcgtatggcaacgtcctaccctcgcagggagcgatcccccaactactctcggcgctaagaagcttAACTTCTGTGTTCGAc > 1:553944‑M2/121‑136 (MQ=255) acatcttgattaacagtcaagcgctctaccaactgagctatgtcggaataatcgtatggcaacgtcctaccctcgcagggagcgatcccccaactactctcggcgctaagaagcttAACTTCTGTGTTCGACATgg > 2:533283‑M2/117‑136 (MQ=255) acatcttgattaacagtcaagcgctctaccaactgagctatgtcggaataatcgcatggcaacgtcctaccctcgcagggagcgatcccccaactactctcggcgccaagaagcttAACTTCTGTGTTCGACATgg < 2:1932806‑M1/20‑1 (MQ=255) catcttgattaacagtcaagcgctctaccaactgagctatgtcggaataatcgtatggcaacgtcctaccctcgcagggagcgatcccccaactactctcggcgctaagaagcttAACTTCTGTGTTCGACATgg < 2:355818‑M2/20‑1 (MQ=255) catcttgattaacagtcaagcgctctaccaactgagctatgtcggaataatcgtatggcaacgtcctaccctcgcagggagcgatcccccaactactctcggcgctaagaagcttAACTTCTGTGTTCGACATgg < 2:2062738‑M2/20‑1 (MQ=255) catcttgattaacagtcaagcgctctaccaactgagctatgtcggaataatcgcatggcaacgtcctaccctcgcagggagcgatcccccaactactctcggcgccaagaagcttAACTTCTGTGTTCGACATgg > 1:1137503‑M1/116‑135 (MQ=255) catcttgattaacagtcaagcgctctaccaactgagctatgtcggaataatcgcatggcaacgtcctaccctcgcagggagcgatcccccaactactctcggcgccaagaagcttAACTTCTGTGTTCGACATgg > 2:922031‑M1/116‑135 (MQ=255) catcttgattaacagtcaagcgctctaccaactgagctatgtcggaagaatcgtatggcaacgtcctaccctcgcagggagcgatcccccaactactctcggcgctaagaagcttAACTTCTGTGTTCGACATgg < 2:1078650‑M2/20‑1 (MQ=255) ttaacagtcaagcgctctaccaactgagctatgtcggaataatcgtatggcaacgtcctaccctcgcagggagcgatcccccaactactctcggcgctaagaagcttAACTTCTGTGTTCGACATgg < 1:2124113‑M2/20‑1 (MQ=255) tctaccaactgagctatgtcggaataatcgcatggcaacgtcctaccctcgcagggagcgatcccccaactactctcggcgccaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCAt > 1:1441090‑M1/93‑136 (MQ=255) taccaactgagctatgtcggaataatcgtatggcaacgtcctaccctcgcagggagcgatcccccaactactctcggcgctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCg < 1:880981‑M2/46‑1 (MQ=255) caactgagctatgtcggaataatcgtatggcaacgtcctaccctcgcagggagcgatcccccaactactctcggcgctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTca < 2:2154603‑M2/49‑1 (MQ=255) caactgagctatgtcggaataatcgcatggcaacgtcctaccctcgcagggagcgatcccccaactactctcggcgccaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTca > 2:792532‑M1/88‑136 (MQ=255) caactgagctatgtcggaataatcgcatggcaacgtcctaccctcgcagggagcgatcccccaactactctcggcgccaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTc < 2:1399950‑M1/48‑1 (MQ=255) gagctatgtcggaataatcgtatggcaacgtcctaccctcgcagggagcgatcccccaactactctcggcgctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTcaccac > 2:2377944‑M2/83‑135 (MQ=255) gagctatgtcggaataatcgcatggcaacgtcctaccctcgcagggagcgatcccccaactactctcggcgccaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTcaccac < 1:926951‑M1/53‑1 (MQ=255) gctatgtcggaataatcgtatggcaacgtcctaccctcgcagggagcgatcccccaactactctcggcgctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCacac < 1:1034876‑M2/55‑1 (MQ=255) atgtcggaataatcgtatggcaacgtcctaccctcgcagggagcgatcccccaactactctcggcgctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTAtt > 2:635419‑M2/78‑136 (MQ=255) atgtcggaataatcgtatggcaacgtcctaccctcgcagggagcgatcccccaactactctcggcgctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTAtt > 2:1538606‑M2/78‑136 (MQ=255) atgtcggaataatcgtatggcaacgtcctaccctcgcagggagcgatcccccaactactctcggcgctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTAtt > 1:1004851‑M2/78‑136 (MQ=255) atgtcggaataatcgcatggcaacgtcctaccctcgcagggagcgatcccccaactactctcggcgccaagaagcttAACTTCTGTGTTCGACATGGGAACAGgt < 1:1989356‑M1/28‑1 (MQ=255) atgtcggaataatcgcatggcaacgtcctaccctcgcagggagcgatcccccaactactctcggcgccaagaagcttAACTTCTGTGTTCGACATGGGAACAGgt > 2:1989356‑M1/78‑105 (MQ=255) atgtcggaataatcgcatggcaacgtcctaccctcgcagggagcgatcccccaactactctcggcgccaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTAtt < 1:1952556‑M1/59‑1 (MQ=255) atgtcggaataatcgcatggcaacgtcctaccctcgcagggagcgatcccccaactactctcggcgccaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTAtt < 1:27373‑M1/59‑1 (MQ=255) cggaataatcgtatggcaacgtcctaccctcgcagggagcgatcccccaactactctcggcgctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTca < 1:466226‑M2/49‑1 (MQ=255) gaataatcgtatggcaacgtcctaccctcgcagggagcgatcccccaactactctcggcgctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGc > 2:1286552‑M2/72‑112 (MQ=255) gaataatcgtatggcaacgtcctaccctcgcagggagcgatcccccaactactctcggcgctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGc < 1:1286552‑M2/41‑1 (MQ=255) ataatcgtatggcaacgtcctaccctcgcagggagcgatcccccaactactctcggcgctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACt < 2:1041820‑M2/67‑1 (MQ=255) ataatcgcatggcaacgtcctaccctcgcagggagcgatcccccaactactctcggcgccaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCAACACACTATTGAGAAAc > 1:511927‑M1/70‑135 (MQ=255) tgcatggcaacgtcctaccctcgcagggagcgatcccccaactactctcggcgctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGc < 2:1016600‑M2/72‑1 (MQ=255) cgcatggcaacgtcctaccctcgcagggagcgatcccccaactactctcggcgccaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGc > 2:1148244‑M1/65‑136 (MQ=255) cgcatggcaacgtcctaccctcgcagggagcgatcccccaactactctcggcgccaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGc > 1:2453555‑M1/65‑136 (MQ=255) gtatggcaacgtcctaccctcgcagggagcgatcccccaactactctcggcgctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCg > 1:1935748‑M2/64‑109 (MQ=255) gtatggcaacgtcctaccctcgcagggagcgatcccccaactactctcggcgctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGc > 2:2310327‑M2/64‑135 (MQ=255) catggcaacgtcctaccctcgcagggagcgatcccccaactactctcggcgccaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGc < 1:1181644‑M1/72‑1 (MQ=255) ggcaacgtcctaccctcgcagggagcgatcccccaactactctcggcgctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCa > 1:1202854‑M2/60‑136 (MQ=255) cgtcctaccctcgcagggagcgatcccccaactactctcggcgctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACt < 1:1237673‑M2/82‑1 (MQ=255) cgtcctaccctcgcagggagcgatcccccaactactctcggcgctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACt < 2:1258525‑M2/82‑1 (MQ=255) cgtcctaccctcgcagggagcgatcccccaactactctcggcgccaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACt > 1:954496‑M1/55‑136 (MQ=255) gtcctaccctcgcagggagcgatcccccaactactctcggcgctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTa > 1:1381325‑M2/54‑136 (MQ=255) taccctcgcagggagcgatcccccaactactctcggcgctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACa > 2:591510‑M2/50‑136 (MQ=255) tcgcagggagcgatcccccaactactctcggcgctaagaagcttAACTTCtgtg < 1:805841‑M2/10‑1 (MQ=255) tcgcagggagcgatcccccaactactctcggcgctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATc > 1:1329788‑M2/45‑136 (MQ=255) cgcagggagcgatcccccaactactctcggcgctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCa < 2:1370487‑M2/93‑1 (MQ=255) cgcagggagcgatcccccaactactctcggcgccaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCa > 1:1112405‑M1/44‑136 (MQ=255) cagggagcgatcccccaactactctcggcgctaagaagcttAACTTCTGTGTTCGACATGGGAACAGgt < 1:2333798‑M2/28‑1 (MQ=255) agggagcgatcccccatctactctcggcgctaagaagcttAACTTCTGTGTTCGACATgg < 2:1715580‑M2/20‑1 (MQ=255) agggagcgatcccccaactactctcggcgctaagaagcttAACTTCTGTGTTCGACATgg > 1:1715580‑M2/41‑60 (MQ=255) agggagcgatcccccaactactctcggcgctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCg > 2:1489872‑M2/41‑86 (MQ=255) agggagcgatcccccaactactctcggcgctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCAAat > 1:763961‑M2/41‑136 (MQ=255) agggagcgatcccccaactactctcggcgctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCAAat > 1:2043879‑M2/41‑136 (MQ=255) agggagcgatcccccaactactctcggcgctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCAAat > 1:1838716‑M2/41‑136 (MQ=255) gggagcgatcccccaactactctcggcgctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGc < 2:1472569‑M2/72‑1 (MQ=255) gggagcgatcccccaactactctcggcgctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCAAata > 2:819992‑M2/40‑136 (MQ=255) gggagcgatcccccaactactctcggcgctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCAAata > 1:404400‑M2/40‑136 (MQ=255) gggagcgatcccccaactactctcggcgctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCAAata > 2:1586752‑M2/40‑136 (MQ=255) gggagcgatcccccaactactctcggcgccaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCAAata < 1:1806025‑M1/97‑1 (MQ=255) ggagcgatcccccaactactctcggcgctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCAAata > 1:1884465‑M2/39‑135 (MQ=255) ggagcgatcccccaactactctcggcgccaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCAAata < 1:2375030‑M1/97‑1 (MQ=255) gagcgatcccccaacttatctcggcgataagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCAAat < 1:977939‑M2/96‑1 (MQ=255) gatcccccaactactctcggcgctaagaagcttAACTTCtgt > 1:1671823‑M2/34‑42 (MQ=255) gatcccccaactactctcggcgctaagaagcttAACTTCTGTGTTCGACATgg > 2:2437260‑M2/34‑53 (MQ=255) gatcccccaactactctcggcgctaagaagcttAACTTCTGTGTTCGACATGGTAAAAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCAAATATCTTCa > 1:662676‑M2/34‑136 (MQ=255) gatcccccaactactctcggcgccaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCAAATATCTTCa < 2:2210836‑M1/103‑1 (MQ=255) tcccccaactactctcggcgctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCAAATATCTTCata > 2:2181191‑M2/32‑136 (MQ=255) tcccccaactactctcggcgccaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCAAATATCTTCata < 1:209203‑M1/105‑1 (MQ=255) ccccaactactctcggcgctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCAAATATCTTCATATg > 1:841496‑M2/30‑136 (MQ=255) ccccaactactctcggcgctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCAAATATCTTCATATg > 2:2020871‑M2/30‑136 (MQ=255) ccccaactactctcggcgccaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCAAATATCTTCATATg < 1:1548658‑M1/107‑1 (MQ=255) ccaactactctcggcgccaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCAAATATCTTCATATGaa > 1:347805‑M1/28‑136 (MQ=255) caactactctcggcgctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCAAATATCTTCATATGAAc < 1:108810‑M2/110‑1 (MQ=255) aactactctcggcgctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCAAATATCTTCATATGAAcc > 1:2221387‑M2/26‑136 (MQ=255) actactctcggcgctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCAAATATCTTCATATGAACCg < 1:150061‑M2/112‑1 (MQ=255) actctcggcgccaagaagcttAACTTCTGTGTTCGa > 2:669750‑M1/22‑36 (MQ=255) ctcggcgctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCAAATATCTTCATATGAACCGGAaca > 1:693086‑M2/19‑135 (MQ=255) tcggcgctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCAAATATCTTCATATGAACCGGAACAcc > 2:1812441‑M2/18‑136 (MQ=255) tcggcgctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCAAATATCTTCATATGAACCGGAACAcc > 2:866870‑M2/18‑136 (MQ=255) tcggcgccaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCAAATATCTTCATATGAACCGGAACAcc < 2:1681449‑M1/119‑1 (MQ=255) cggcgctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCAAATATCTTCATATGAACCGGAACACCa < 2:464825‑M2/120‑1 (MQ=255) cggcgccaagaagcttAACTTCTGTGTACGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACATGTGCTCTCAAAACTATACAATATCAAATATCTTCATATTAACCGGAACACCa < 2:2346246‑M1/120‑1 (MQ=255) gcgctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTtctc < 2:381211‑M2/39‑1 (MQ=255) gcgctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCa < 2:1339518‑M2/77‑1 (MQ=255) gcgctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTAGTGCTCTCAAAACTAGACAATATCAAATATCTTCATATGAACCGGAACACCAAt > 1:176050‑M2/15‑136 (MQ=255) gcgccaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCAAATATCTTCat < 2:2115591‑M1/104‑1 (MQ=255) cgctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCAAATATCTTCATATGAACCGGAACACCAAt < 1:2020871‑M2/122‑1 (MQ=255) gctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCAAATATCTTCATATGAACCGGAACACCAAtt > 1:1023798‑M2/13‑135 (MQ=255) gctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCAAATATCTTCATATGAACCGGAACACCAAtt < 2:498397‑M2/123‑1 (MQ=255) gctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCAAATATCTTCATATGAACCGGAACACCAAtt > 1:2418323‑M2/13‑135 (MQ=255) gccaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCAAATATCTTCATATGAACCGGAACACCAAtt < 2:954360‑M1/123‑1 (MQ=255) taagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACAATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCAAATATCTTCATATGAACCGGAACACCAATTACt > 2:1195950‑M2/11‑136 (MQ=255) agaggcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCAAATATCTTCATATGAACCGGAACACCAATTACTTg > 1:37738‑M1/9‑136 (MQ=255) agaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCAAATATCTTCATATGAACCGGAACACCAATTACTTg > 2:116874‑M1/9‑136 (MQ=255) agaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCAAATATCTTCATATGAACCGGAACACCAATTACTTg > 1:1594938‑M1/9‑136 (MQ=255) gaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCAAATATCTTCATATGAACCGGAACACCAATTACTTgg < 2:1891347‑M1/129‑1 (MQ=255) aaCTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCAAATATCTTCATATGaa > 1:604693/1‑109 (MQ=255) aaCTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCAAATATCTTCATATGAACCGGAACACCAATTACTTGGTTAAGt > 2:300208/1‑135 (MQ=255) aaCTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCAAATATCTTCATATGAACCGGAACACCAATTACTTGGTTAAGt > 2:1779864/1‑135 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCAAATATCTTCATATGAACCGGAACACCAATTACTTGGTTAAGT > TrimmedAssembly_T66_contig_28/1‑135 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |