| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | TrimmedAssembly_T66_contig_3 | 176059 = | 218 (0.950) | 190 (0.900) | 65/238 | 0.4 | 52.1% | coding (556/804 nt) | rasttk_feature_annotation_tool=annotate_proteins_km er_v2 | hypothetical protein |
| ? | TrimmedAssembly_T66_contig_3 | = 178058 | 148 (0.700) | coding (242/633 nt) | rasttk_feature_annotation_tool=annotate_proteins_km er_v2 | Aggregation promoting factor | |||||
Only 100 of 260 total aligned reads displayed.
CAACGAGTGCTGCTTCTTCAGCAAGCTCAACGCAATCAGCTGCTAGCCAAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < TrimmedAssembly_T66_contig_3/176202‑176059‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acgacttcaaCACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGACTC < TrimmedAssembly_T66_contig_3/178058‑177927 AACGAGTGCTGCTTCTTCAGCAAGCTCAACGCAATCAGCTGCTAGCCAAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCTAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAAC < 1:1685313/135‑1 AACGAGTGCTGCTTCTTCAGCAAGCTCAACGCAATCAGCTGCTAGCCAAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACG > 1:105963/1‑136 AACGAGTGCTGCTTCTTCAGCAAGCTCAACGCAATCAGCTGCTAGCCAAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACG > 2:763026/1‑136 AACGAGTGCTGCTTCTTCAGCAAGCTCAACGCAATCAGCTGCTAGCCAAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACG > 2:567125/1‑136 AACGAGTGCTGCTTCTTCAGCAAGCTCAACGCAATCAGCTGCTAGCCAAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACG > 2:448287/1‑136 AACGAGTGCTGCTTCTTCAGCAAGCTCAACGCAATCAGCTGCTAGCCAAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACG < 2:341471/136‑1 AACGAGTGCTGCTTCTTCAGCAAGCTCAACGCAATCAGCTGCTAGCCAAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACG > 2:165922/1‑136 AACGAGTGCTGCTTCTTCAGCAAGCTCAACGCAATCAGCTGCTAGCCAAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACG < 1:993740/136‑1 AACGAGTGCTGCTTCTTCAGCAAGCTCAACGCAATCAGCTGCTAGCCAAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACG > 1:1534081/1‑136 AACGAGTGCTGCTTCTTCAGCAAGCTCAACGCAATCAGCTGCTAGCCAAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACG > 1:14310/1‑136 ACGAGTGCTGCTTCTTCAGCAAGCTCAACGCAATCAGCTGCTAGCCAAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGA < 1:1469036/136‑1 ACGAGTGCTGCTTCTTCAGCAAGCTCAACGCAATCAGCTGCTAGCCAAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACG > 1:1736367/1‑135 GCTGCTTCTTCAGCAAGCTCAACGCAATCAGCTGCTAGCCAAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCAA > 1:817070/1‑136 GCTGCTTCTTCAGCAAGCTCAACGCAATCAGCTGCTAGCCAAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCAA > 2:217828/1‑136 GCTGCTTCTTCAGCAAGCTCAACGCAATCAGCTGCTAGCCAAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCA > 1:1577323/1‑135 GCTGCTTCTTCAGCAAGCTCAACGCAATCAGCTGCTAGCCAAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTC < 1:2335534/134‑1 TGCTTCTTCAGCAAGCTCAACGCAATCAGCTGCTAGCCAAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCAAC > 1:2215723/1‑135 TTCTTCAGCAAGCTCAACGCAATCAGCTGCTAGCCAAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAG < 1:298551/136‑1 GCAAGCTCAACGCAATCAGCTGCTAGCCAAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTC > 1:394745/1‑136 GCAAGCTCAACGCAATCAGCTGCTAGCCAAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTC > 1:1651197/1‑136 atGCTCAACGCAATCAGCTGCTAGAAAAGCTTCATGTTCTGCTGCAACCATTAGTCAAGATTAATCATGTGCTACTAGCTCAGCTGAATCATCAAAAGATTCAACAACCTCAACGACTTCAACACAGACGACTCAA < 1:380821/134‑1 TCAACGCAATCAGCTGCTAGCCAAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACA < 2:1767334/134‑1 CAACGCAATCAGCTGCTAGCCAAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAAC < 2:1283102/136‑1 CAACGCAATCAGCTGCTAGCCAAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAAC < 2:2131430/136‑1 AACGCAATCAGCTGCTAGCCAAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACG < 2:926470/136‑1 ACGCAATCAGCTGCTAGCCAAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACACCCTCAACGACTTCAACACAGACGACTCAACAAACGA < 1:2137612/136‑1 ATCAGCTGCTAGCCAAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACCACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACG < 2:2095242/136‑1 ctGCTGCTAGCCAAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGAATCATCAACAGCTTCAACAACCTCAACGAATTCAACACAGACGACTCAACAAACGACCACGAC < 2:1615341/134‑1 CAGCTGCTAGCCAAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGAC < 2:1874379/136‑1 CAGCTGCTAGCCAAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGAC < 2:1531822/136‑1 CAGCTGCTAGCAAAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGAC < 1:204474/136‑1 GCTGCTAGCCAAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCAACAACAGCTTCAACAACCACAACGACTTCAACACAGACGACTCAACAAACGACCACGACAC > 2:796869/1‑136 GCTAGCCAAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGACACAAT < 1:2056780/136‑1 GCTAGCCAAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGACACAAT < 1:641330/136‑1 GCTAGCCAAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGACACAAT < 1:1312063/136‑1 GCTAGCCAAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGACACAAT < 1:2410786/136‑1 GCTAGCCAAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGACACAA > 1:1890802/1‑135 GCTAGCCAAGCTTCAAGTTATGCTGCAACCAATAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCACCGAATTCAACACAGACGACTCAACAAACGACCACGACACAAT < 2:1202340/136‑1 GCCAAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGACACAATCATC > 2:2229187/1‑136 CAAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGACACAATCATCA < 2:2304421/135‑1 CAAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCACAACGACTTCAACACAGACGACTCAACAAACGACCACGACACAATCATCA < 1:1474952/135‑1 TTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTC < 2:635731/134‑1 TTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACG > 1:1169859/1‑79 TGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAAC > 2:845254/1‑135 aatatTCAAGCTTCATCATGTGCTTCTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTC < 1:1039444/131‑1 ACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTC > 1:1662345/1‑136 ACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTC > 1:2310808/1‑136 ACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTC > 1:1253726/1‑136 TCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCG > 2:129884/1‑136 CAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACC < 1:677027/134‑1 TTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCC < 1:536264/134‑1 TTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCC < 1:567125/134‑1 TTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCC < 1:448287/134‑1 TCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAA > 1:1402958/1‑135 CATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAA > 2:1335627/1‑134 ataAAGTGATACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCT < 1:2180168/133‑1 ATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCT < 2:1736367/136‑1 AAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAG > 1:1293933/1‑135 AAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAG > 2:139279/1‑135 CTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCA < 1:914708/136‑1 TAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGACACAATCATCA > 2:1470675/1‑85 AGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCC < 2:1226323/118‑1 AGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGAC > 2:1523083/1‑69 AGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGAC < 1:1523083/69‑1 TGCATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAA > 1:1353680/1‑136 TGCATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAA > 1:874284/1‑136 TGCATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAA > 1:761420/1‑136 TGCATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAA > 2:243799/1‑92 GCATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACTACCACGACACAAACATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAA > 1:606320/1‑135 GCATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAA > 2:1516743/1‑135 GCATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAA > 1:171360/1‑135 GCATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAA > 2:30506/1‑135 CATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGAC < 1:751267/64‑1 CATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGAC < 1:748677/64‑1 CATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGAC > 2:751267/1‑64 CATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGAC > 2:748677/1‑64 ATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAAC < 2:1562996/135‑1 CATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACA > 1:1797890/1‑136 CATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACA > 1:1103267/1‑136 TTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACC < 2:1993245/90‑1 TTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACC > 1:1993245/1‑90 TCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAAC < 2:1106662/136‑1 CAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGTCCCAATCAAGTCTAACACAAACTAGCAAA > 2:593357/1‑134 CAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAA > 1:1224673/1‑134 CAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAA > 1:972005/1‑134 CAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAA > 1:1164081/1‑134 CAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAA > 1:1138319/1‑134 ACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCT > 1:332755/1‑135 AACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCT < 1:1954714/136‑1 AACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCT < 2:1677130/136‑1 AACGACTTCAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAG > 1:888237/1‑136 aaGACTTCAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAAACGAGACAAGCTAGCCAGACCCAATCAATTCAAAAACAAACTATCAAACCTGCTGCTCAG > 2:2185625/3‑135 CGACTTCAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGAC < 1:2271265/136‑1 GACTTCAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACG > 2:552049/1‑136 GACTTCAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACG > 1:2392783/1‑136 CTTCAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACG > 2:2010875/1‑134 CTTCAACACAGACGACTCAACAAACGACCACGACACAATCATCA > 2:2259178/1‑44 TTCAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGACT < 2:2351002/136‑1 TCAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGACTC > 2:1951481/1‑136 TCAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGACTC > 2:1193943/1‑136 CAACGAGTGCTGCTTCTTCAGCAAGCTCAACGCAATCAGCTGCTAGCCAAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < TrimmedAssembly_T66_contig_3/176202‑176059‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acgacttcaaCACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGACTC < TrimmedAssembly_T66_contig_3/178058‑177927 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |