| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | TrimmedAssembly_T66_contig_3 | 177930 = | 233 (1.020) | 219 (0.980) | 76/258 | 0.1 | 65.3% | coding (370/633 nt) | rasttk_feature_annotation_tool=annotate_proteins_km er_v2 | Aggregation promoting factor |
| ? | TrimmedAssembly_T66_contig_39 | = 663 | 0 (0.000) | intergenic (‑2/–) | rasttk_feature_annotation_tool=annotate_proteins_km er_v2/– | Aggregation promoting factor/– | |||||
Only 100 of 219 total aligned reads displayed.
CAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < TrimmedAssembly_T66_contig_3/178061‑177930‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAGGCTTGGATTGCTGGTAAAGAATCTGGTGGTTCATATTCTGCTCGTAACGGTCAATACTTCGGTAAGTACCAAT < TrimmedAssembly_T66_contig_39/663‑529 AACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACT < 1:552049/136‑1 AACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGAC > 1:1424787/1‑135 AACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGAC > 1:787044/1‑135 ACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTC > 2:810492/1‑136 ACACAGACGACTCAACAAACGACCACGACACAATCAACAGCTCAGAATAGTCAAACACAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAACTCAAACACAAACTAGCAAAACTGCTGCTCAGACGATGACTC > 2:1378969/1‑136 CGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAcc < 1:2047152/133‑3 ACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTA > 1:1269046/1‑136 ACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTA > 1:1913022/1‑136 ACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTA > 1:76164/1‑136 CTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCCAACGTCTA < 2:1651197/135‑1 CTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAG < 2:2283412/136‑1 TCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGT > 1:1822040/1‑136 CAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGT > 1:226482/1‑135 ACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCA > 2:1005455/1‑136 ACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCA > 2:1561961/1‑136 CAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAA < 2:1402958/136‑1 ACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAA > 2:1869830/1‑136 ACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAA > 2:1459625/1‑136 CACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAAC < 2:841687/136‑1 GACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTAT < 1:1405867/136‑1 GACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTAT > 2:1520427/1‑136 GACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTAT < 1:2295422/136‑1 CAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCA < 2:1064818/136‑1 CAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCA < 2:761420/136‑1 AATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAA < 2:349303/136‑1 ATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAAT < 2:1699895/136‑1 GCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAAT < 1:1037668/132‑1 CTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAG > 2:2246250/1‑136 CTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGACAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATCGCAACAATGGTTCTGA < 2:874688/133‑1 AGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGT > 2:182306/1‑135 CAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCT < 2:2002924/135‑1 CAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCT < 2:1601633/135‑1 CAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCT < 1:1545501/135‑1 AACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCT > 1:2225703/1‑136 AACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCT > 1:884192/1‑136 AACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCT > 1:993535/1‑136 AACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCT > 1:68485/1‑136 AACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCT > 1:1333428/1‑136 AACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCT > 1:492786/1‑136 AACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCT > 1:1164016/1‑136 CAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAG > 1:1565871/1‑135 CAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACT < 1:273536/78‑1 CAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACT > 2:273536/1‑78 AAGCTCAGCCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAG > 1:146697/1‑134 AAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAG > 2:662409/1‑134 CAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAGGCTTGGA < 2:2168609/136‑1 CGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAGGCTTGGATT > 1:1834289/1‑134 CGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAGGCTTGGATT > 2:1860733/1‑134 GAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAGGCTTGGATTGCT < 1:1005455/136‑1 CCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAGGCTTGGATTGCTGGT > 1:699813/1‑136 TAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAGGCTTGGATTGCTGGTAAAGAA > 2:2302606/1‑136 GCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTC > 2:1989247/1‑97 GCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTC < 1:1989247/97‑1 CAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAGGCTTGGATTGCTGGTAAAGAATCT < 1:315414/135‑1 CAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAGGCTTGGATTGCTGGTAAAGAATCT < 2:1138319/135‑1 CAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAGGCTTGGATTGCTGGTAAAGAATCT < 1:1477081/135‑1 CAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAGGCTTGGATTGCTGGTAAAGAATCT < 1:139279/135‑1 CAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAGGCTTGGATTGCTGGTAAAGAATCT < 2:930609/135‑1 CAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAGGCTTGGATTGCTGGTAAAGAATCT < 2:2319352/135‑1 AGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAGGCTTGGATTGCTGGTAAAGAATCTGG > 1:1688851/1‑136 GACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAGGCTTGGATTGCTGGTAAAGAATCTGGT > 1:1802979/1‑136 GACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAGGCTTGGATTGCTGGTAAAGAATCTGGT > 2:705443/1‑136 GACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAGGCTTGGATTGCTGGTAAAGAATCTGGT > 2:1802541/1‑136 GACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAGGCTTGGATTGCTGGTAAAGAATC > 2:121759/1‑132 CAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAGGCTTGGATTGCTGGTAAAGAATCTGGTGGT > 1:2244980/1‑135 CAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAGGCTTGGATTGCTGGTAAAGAATCTGGTGGT > 1:345810/1‑135 CAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAGGCTTGGATTGCTGGTAAAGAATCTGGTGGT > 1:724230/1‑135 CAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAGGCTTGGATTGCTGGTAAAGAATCT > 1:1601059/1‑129 CAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGT > 1:1861250/1‑87 TCAAGACAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAGGCTTGGATTGCTGGTAAAGAATCTGGTGGTTCAT < 2:1984008/136‑1 AAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATATCAACAATGGTTCTGATAGTGCTGCTAAGGCTTGGATTGCTGGTAAAGAATCTGGTGGTTCATAT > 1:1937211/1‑136 AAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAGGCTTGGATTGCTGGTAAAGAATCTGGTGGTTCATAT > 2:449424/1‑136 AAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAGGCTTGGATTGCTGGTAAAGAATCTGGTGGTTCATAT > 2:370212/1‑136 AAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAGGCTTGGATTGCTGGTAAAGAATCTGGTGGTTCAT > 2:949499/1‑134 AAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAGGCTTGGATTGCTGGTAAAGAATCTGGTGGTTCAT < 1:949499/134‑1 ACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAGGCTTGGATTGCTGGTAAAGAATCTGGTGGTTCATATTCTGCTC < 1:827518/136‑1 ACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAGGCTTGGATTGCTGGTAAAGAATCTGGTGGTTCATATTCTGCTC < 2:1834289/136‑1 ACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAGGCTTGGATTGCTGGTAAAGAATCTGGTGGTTCATATTCTGCTC < 2:142240/136‑1 ACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAGGCTTGGATTGCTGGTAAAGAATCTGGTGGTTCATATTCTGCTC < 2:243394/136‑1 ACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAGGCTTGGATTGCTGGTAAAGAATCTGGTGGTTCATATTCTGCTC < 2:1333428/136‑1 ACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCAGATAGTGCTGCTAAGGCTTGGATTGCTGGTACTGAATCTGGTGGTTCATATTCTTCTC < 2:1956783/136‑1 ACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAGGCTTGGATTGCTGGTAAAGAATCTGGTGGTTCAT < 1:2371636/125‑1 CAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAGGCTTGGATTGCTGGTAAAGAATCTGGTGGTTCATATTCTGCTCGTA < 2:55681/136‑1 AGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAGGCTTGGATTGCTGGTAAAGAATCTGGTGTTTCATATTCTGCTCGTAACGGTC > 1:220554/1‑136 AGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAGGCTTGGATTGCTGGTAAAGAATCTGGTGGTTCATATTCTGCTCGTAACGGTC > 2:1656319/1‑136 AAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAGGCTTGGATTGCTGGTAAAGAATCTGGTGGTTCATATTCTGCTCGTAACGGTCAAT < 1:619416/136‑1 AAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAGGCTTGGATTGCTGGTAAAGAATCTGGTGGTTCATATTCTGCTCGTAACGGTCAAT < 2:1565871/136‑1 AACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAGGCTTGGATTGCTGGTAAAGAATCTGGTGGTTCATATTCTGCTCGTAACGGTCAATA < 2:2016640/136‑1 AACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAGGCTTGGATTGCTGGTAAAGAATCTGGTGGTTCATATTCTGCTCGTAACGGTCAAT > 2:734247/1‑135 TGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAGGCTTGGATTGCTGGTAAAGAATCTGGTGGTTCATATTCTGCTCGTAACGGTCAATACTTC < 1:1640241/136‑1 TGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAGGCTTGGATTGCTGGTAAAGAATCTGGTGGTTCATATTCTGCTCGTAACGGTCAATACTTC < 2:886300/136‑1 GCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAGGCTTGGATTGCTGGTAAAGAATCTGGTGGTTCATATTCTGCTCGTAACGGTCAATACTTCG < 1:1996957/136‑1 GCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAGGCTTGGATTGCTGGTAAAGAATCTGGTGGTTCATATTCTGCTCGTAACGGTCAATACTTCG < 2:787004/136‑1 GCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAGGCTTGGATTGCTGGTAAAGAATCTGGTGGTTCATATTCTGCTC < 2:630407/115‑1 GCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAGGCTTGGATTGCTGGTAAAGAATCT > 2:1248078/1‑96 CTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAGGCTTGGATTGCTGGTAAAGAATCTGGTGGTTCATATTCTGCTCGTAACGGTCAATACTTCGGTAA > 2:2434249/1‑136 ACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAGGCTTGGATTGCTGGTAAAGAATCTGGTGGTTCATATTCTGCTCGTAACGGTCAATACTTCGGTAAGTACC > 2:364366/1‑136 CGATGACTCTAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAGGCTTGGATTGCTGGTAAAGAATCTGGTGGTTCATATTCTGCTCGTAACGGTCAATACTTCGGTAAGTACCA < 1:1220624/136‑1 CGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAGGCTTGGATTGCTGGTAAAGAATCTGGTGGTTCATATTCTGCTCGTAACGGTCAATACTTCGGTAAGTACCA < 2:68485/136‑1 ATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAGGCTTGGATTGCTGGTAAAGAATCTGGTGGTTCATATTCTGCTCGTAACGGTCAATACTTCGGTAAGTACCAAT > 1:899818/1‑136 CAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < TrimmedAssembly_T66_contig_3/178061‑177930‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAGGCTTGGATTGCTGGTAAAGAATCTGGTGGTTCATATTCTGCTCGTAACGGTCAATACTTCGGTAAGTACCAAT < TrimmedAssembly_T66_contig_39/663‑529 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |