| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | TrimmedAssembly_T66_contig_11 | = 96142 | 0 (0.000) | 141 (0.930) | 41/202 | 0.9 | 76.6% | intergenic (+314/–) | rasttk_feature_annotation_tool=elepa@bvbrc/– | hypothetical protein/– |
| ? | TrimmedAssembly_T66_contig_9 | = 72 | 86 (0.520) | intergenic (–/+187) | –/rasttk_feature_annotation_tool=elepa@bvbrc | –/hypothetical protein | |||||
Only 100 of 181 total aligned reads displayed.
TAACTTGAACTTTTCCCAGTGGGTCTAAGCTGGCTGCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > TrimmedAssembly_T66_contig_11/95982‑96142‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggtctggaaaaatcttcggatttttcCAGACCTGCTTTTGATATAATAGAAAATAAAAAAAAAAGCATCGGTCGCACCCGATACTCTACGAAATTATC‑‑‑‑‑ < TrimmedAssembly_T66_contig_9/72‑1 TAACTTGAACTTTTCCCAGTGGGTCTAAGCTGGCTGCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAG > 1:2240875/1‑136TAACTTGAACTTTTCCCAGTGGGTCTAAGCTGGCTGCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACA < 2:2240875/135‑1 ACTTGAACTTTTCCCAGTGGGTCTAAGCTGGCTGCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGG > 1:2382654/1‑135 ACTTGAACTTTTCCCAGTGGGTCTAAGCTGGCTGCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGG > 2:1352575/1‑135 ACTTGAACTTTTCCCAGTGGGTCTAAGCTGGCTGCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGG > 2:1584623/1‑135 TGAACTTTTCCCAGTGGGTCTAAGCTGGCTGCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTG > 1:2417007/1‑136 CCAGTGGGTCTAAGCTGGCTGCTTTTGAACTTAAGAATCTGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCT > 2:412212/1‑135 CCAGTGGGTCTAAGCTGGCTGCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCT > 1:1162901/1‑135 CCAGTGGGTCTAAGCTGGCTGCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCT > 1:1491785/1‑135 CCAGTGGGTCTAAGCTGGCTGCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCT > 2:193887/1‑135 AGTGGGTCTAAGCTGGCTGCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAATTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCG > 2:1961095/1‑136 AGTGGGTCTAAGCTGGCTGCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCG > 2:276235/1‑136 GGGTCTAAGCTGGCTGCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCG < 2:1589648/133‑1 GTCTAAGCTGGCTGCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTT > 1:1117756/1‑136 TAAGCTGGCTGCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTT > 2:935874/1‑135 AGCTGGCTGCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCA < 1:1734219/136‑1 AGCTGGCTGCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCA < 1:153973/136‑1 AGCTGGCATCTTTTTAACATAAGCATCCGCACGTTTTAAACATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCA < 1:1195124/136‑1 TGCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGt < 1:1646491/136‑2 TGCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGt < 1:645811/136‑2 GCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGtt > 2:1791362/1‑134 GCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGtt > 2:1883423/1‑134 GCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGtt > 2:1373823/1‑134 GCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGtt > 2:108692/1‑134 GCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGtt > 1:570190/1‑134 GCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGtt > 1:269359/1‑134 GCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGtt > 2:2441003/1‑134 GCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGtt > 1:1052304/1‑134 GCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGtt > 1:170812/1‑134 GCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGtt > 1:2187926/1‑134 GCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTT > 1:1884781/1‑125 GCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAAAGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCTGATTTTTCCAGAACTGtt > 2:2324991/1‑134 CTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTT > 1:747016/1‑136 TGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACACGTATGGAAAAATCTTCGGATTTTTACAGACCTGTTTTTGA > 1:1988832/1‑136 GAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGA > 2:1026301/1‑136 AATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAA > 1:220730/1‑136 CGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAATAAAAA > 2:1096886/1‑136 TAATCATGATTGTTTAATCACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAATAAAAAAAgag < 2:2350625/136‑4 ATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCG < 2:570190/136‑1 ATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCG < 2:1626465/136‑1 ATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCG < 1:211768/136‑1 ATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCG < 1:393373/136‑1 ATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATATTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCG < 1:961934/136‑1 ATGATTGTATAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCG < 2:2417007/136‑1 GATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGT < 1:84735/136‑1 GATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGT < 1:935874/136‑1 GATTGTTTAATAAAGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGT < 2:1213713/136‑1 TGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGC > 2:1549856/1‑136 TGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGC > 1:2442195/1‑136 GTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGC > 1:1427499/1‑135 GTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGC > 2:2160178/1‑135 GTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATAGGTCGC > 2:1840717/1‑135 AATAACGATGAGTAATACAAAAACGAGGCAGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCG < 2:1424464/136‑1 AATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCG > 2:471631/1‑136 AATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCG < 1:317472/136‑1 TAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGTTCGCACCCGAT > 2:402337/1‑136 CGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATAC > 2:420496/1‑135 TGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAATAAAAAAtga > 1:2366105/1‑109 TGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAATAAAAAAAga < 2:2366105/112‑3 AGTAATAAACAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAATAGAGCGTCGGTCGCACCCGATACTCGACG > 2:1849364/1‑136 AGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAACACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGT < 2:1894368/118‑1 AGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCTACG > 2:1174189/1‑136 tagaacAAAAAAGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCTACGAA > 2:2123296/7‑136 tagaacAAAAAAGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCTACGAA > 2:1832833/7‑136 tagaacAAAAAAGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCTACGAA > 1:1658149/7‑136 tagaacAAAAAAGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCTACGAA > 1:1807453/7‑136 tagaacAAAAAAGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCTACGAA > 2:1486269/7‑136 AATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTACCAGACCTGTTTTTGATATAATATAAAAT‑AAAAAAATAGAATCGGTCGCACCCGATAATATACGAAA > 1:2100838/1‑136 cAAAAAAGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCTACGAAATTA > 1:2323927/2‑135 AAAAAAGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTAGATATAATAGAAAAT‑AAAAAAAGAGAATCGGTCGCACCCGATAATCTACGAAATTAT > 1:672328/1‑135 aGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCTACGAAATTATCctcga > 1:1250917/2‑131 aGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCTACGAAATTATCctcga > 1:2006880/2‑131 aGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCTACGAAATT < 2:434494/127‑1 aGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCTACGAAATT > 1:434494/2‑128 GGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGt < 1:2304969/66‑2 GGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGC < 1:271974/105‑1 GGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGC > 2:271974/1‑105 GGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTG > 2:79807/1‑71 CTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCTACGAAATTATCct > 2:1672350/1‑126 GACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGG < 2:1865328/95‑1 GACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGG > 1:1865328/1‑95 GACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAAT > 2:2302636/1‑38 CATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATA > 2:698508/1‑71 CATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATA < 1:698508/71‑1 CTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCG < 1:1894843/95‑1 CTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCG > 2:1894843/1‑95 GAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAATAAAAAAAgag < 1:1576284/75‑4 AAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCTACGAAATTATCc < 1:2213459/108‑2 AAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCTACGAAATTATCc > 2:2213459/1‑107 AAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTGTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCTACGAAATT > 1:1094310/1‑104 AAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTATTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCTACGAAATT < 2:1094310/104‑1 CAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAATAAAA > 2:1031843/1‑65 CAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAATAAAA < 1:1031843/65‑1 GGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATA < 2:2341038/48‑1 GGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATATAATAGAAAATAAAAAAAAAAGCATCGGTCGCACCCGATACT > 2:1331797/1‑85 GGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATATAATAGAAAATAAAAAAAAAAGCATCGGTCGCACCCGATACT < 1:1331797/85‑1 AAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCG > 2:1464997/1‑62 AAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCG < 1:1464997/62‑1 TTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCTACGAAATT < 1:406924/80‑1 TTCGGATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACT < 2:2198234/70‑1 TAACTTGAACTTTTCCCAGTGGGTCTAAGCTGGCTGCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > TrimmedAssembly_T66_contig_11/95982‑96142‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggtctggaaaaatcttcggatttttcCAGACCTGCTTTTGATATAATAGAAAATAAAAAAAAAAGCATCGGTCGCACCCGATACTCTACGAAATTATC‑‑‑‑‑ < TrimmedAssembly_T66_contig_9/72‑1 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |