| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | TrimmedAssembly_T66_contig_2 | = 54 | 43 (0.180) | 21 (0.040) +CGTCTTTGATTTTTAAAGTTGGTCCCTACCGTGACCAA |
9/182 | 1.1 | 58.1% | coding (53/180 nt) | rasttk_feature_annotation_tool=elepa@bvbrc | hypothetical protein |
| ? | TrimmedAssembly_T66_contig_42 | 1 = | 0 (0.000) | coding (318/318 nt) | rasttk_feature_annotation_tool=annotate_proteins_km er_v2 | Transposase, IS4 family | |||||
Only 100 of 461 total aligned reads displayed.
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ACGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTTATTTTTTGGATCATCATTTATTTATATTTATCAAAGTAACGGTCTGTTATTTTAACGAATGTACTAAATTATTTTCGTTTCTGGTTACAAGACGCTAAAAGTATT > TrimmedAssembly_T66_contig_2/1‑188 | cacccaggaagccggaatcgtaatactggcgttaaacattatgaaacgggacacggtagggaccaacttaaaaaatcaaaggCGTAAGCAAAAGGGACGAGAAACCAAAATACGGTTTCTCGTCCCATTTGCTtat > 1:1006046‑M1/83‑136 (MQ=255)caccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTtat > 1:248053‑M1/83‑136 (MQ=255)caccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTtat > 2:1176218‑M1/83‑136 (MQ=255)caccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTtat > 2:55160‑M1/83‑136 (MQ=255)caccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTtat < 1:1639883‑M1/54‑1 (MQ=255)caccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTta > 1:1870254‑M1/83‑135 (MQ=255) accaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTtat < 2:1911032‑M1/54‑1 (MQ=255) accaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCAGTTGCTtat < 2:356664‑M1/54‑1 (MQ=255) aaggaagccggaatcgtaatactggcgttaaacattatgaaattggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACag > 2:759498‑M1/79‑136 (MQ=255) aaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACag > 1:813431‑M1/79‑136 (MQ=255) aaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACag > 1:1203465‑M1/79‑136 (MQ=255) ggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACagag < 2:1865635‑M1/60‑1 (MQ=255) agccggaatcgtaatactggcgttaaacattatgaaattggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGc > 2:719225‑M1/74‑135 (MQ=255) gccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTa < 1:180347‑M1/64‑1 (MQ=255) ccggaatcgtaatactggcgttaaacattatgaaattggtcacggtagggaccaactttaaaaatcaaagaCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAg < 2:2252298‑M1/65‑1 (MQ=255) ccggaatcgtaatactggcgttaaacattatgaaattggtcacggtagggaccaactttaaaaatcaaagaCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAg < 1:458397‑M1/65‑1 (MQ=255) ccggaatcgtaatactggcgttaaacattatgaaattggtcacggtagggaccaactttaaaaatcaaagaCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTACTTATACAGAGGCTAg < 1:2396468‑M1/65‑1 (MQ=255) ccggaatcgtaatactggcgttaaacattatgaaattggtcacggtagggaccaactttaaaaatcaaagaCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCAGTTGCTTATACAGAGGCTAg < 1:729096‑M1/65‑1 (MQ=255) ccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAGATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCCGTTGCTTATACAGAGGCTAg < 2:1264736‑M1/65‑1 (MQ=255) ccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTtat < 2:790878‑M1/54‑1 (MQ=255) ccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTtat > 2:545693‑M1/72‑125 (MQ=255) cggaatcgtaatactggcgttaaacattatgaaattggtcacggtagggaccaactttaaaaatcaaaggCGTAATCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCAGTTGCTTATACAGAGGCTAGt < 2:1224049‑M1/66‑1 (MQ=255) cggaatcgtaatactggcgttaaacattatgaaattggtcacggtagggaccaactttaaaaatcaaagaCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTa > 1:2138180‑M1/71‑134 (MQ=255) cggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTa > 1:2025277‑M1/71‑134 (MQ=255) ggaatcgtaatactggcgttaaacattatgaaattggtcacggtagggaccaactttaaaaatcaaagaCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGtt < 1:902571‑M1/67‑1 (MQ=255) gaatcgtaatactggcgttaaacattatgaaattggtcacggtaggggccaactttaaaaatcaaagaCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTGCCATTTGCTTATACAGAGGCTAGTTa < 1:388184‑M1/68‑1 (MQ=255) gaatcgtaatactggcgttaaacattatgaaattggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACag > 2:388555‑M1/69‑126 (MQ=255) gaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatccaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCGAGTTGCTTATACAGAGGCTAGTTa < 1:226218‑M1/68‑1 (MQ=255) gaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAACCCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGt < 2:679243‑M1/66‑1 (MQ=255) gaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTGCCATTTGCTTATACAGAGGCTAGTTa < 1:757334‑M1/68‑1 (MQ=255) gaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTa < 1:2098656‑M1/68‑1 (MQ=255) aatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTa > 2:1396356‑M1/68‑135 (MQ=255) atcgtaatactggcgttaaacattatgaaattggtcacggtagggaccaactttaaaaatcaaagaCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATg > 1:1442377‑M1/67‑136 (MQ=255) atcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATg > 1:336227‑M1/67‑136 (MQ=255) atcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATg > 1:599412‑M1/67‑136 (MQ=255) atcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATg > 2:2080648‑M1/67‑136 (MQ=255) tcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGt > 1:31601‑M1/66‑136 (MQ=255) aatactgtcgttaaacattatgaaattggtctcggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTcaca > 2:1275504‑M1/62‑136 (MQ=255) atactggcgttaaacattatgaaattggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAg > 2:1731628‑M1/61‑136 (MQ=255) tactggcgttaaacattatgaaattggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGc > 1:1047454‑M1/60‑136 (MQ=255) tactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAg < 2:928205‑M1/76‑1 (MQ=255) actggcgttaaacattatgaaattggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAg < 2:1143152‑M1/76‑1 (MQ=255) actggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGcc > 2:2193518‑M1/59‑136 (MQ=255) ctggcgttaaacattatgaaattggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCct > 2:281611‑M1/58‑136 (MQ=255) gcgttaaacattatgaaattggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGcctcg < 2:1111336‑M1/81‑2 (MQ=255) ttaaacattatgaaattggtcacggtagggaccaactttaaaaatcaaagaCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTTAtt < 1:1830110‑M1/85‑1 (MQ=255) ttaaacattatgaaattggtcacggtagggaccaactttaaaaatcaaagaCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTTAtt < 1:2306868‑M1/85‑1 (MQ=255) ttaaacattatgaaattggtcacggtagggaccaactttaaaaatcaaagaCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTTAtt < 1:2114890‑M1/85‑1 (MQ=255) ttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCacagcctcgcctt < 2:1033876‑M1/85‑6 (MQ=255) ttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCctcttcgt < 1:546732‑M1/85‑4 (MQ=255) ttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCctcttcgt < 1:1555762‑M1/85‑4 (MQ=255) ttaaacatgatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCCAAATTCGGTTTCTCGTCCCCTTTGCTTATACAGAGGCTAGTTATGTCacagcctcgcctt < 1:631624‑M1/85‑6 (MQ=255) aaacattatgaaattggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCCtttttt < 2:2399928‑M1/87‑1 (MQ=255) aaacattatgaaattggtcacggtagggaccaactttaaaaatcaaagaCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCt > 2:877102‑M1/50‑112 (MQ=255) aaacattatgaaattggtcacggtagggaccaactttaaaaatcaaagaCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCt < 1:877102‑M1/63‑1 (MQ=255) tgacattggtcacgggagggaccaactttaaaaatcaaagaCGTAAGCAAATGGGACGAGAAACCAAAAGTCGGTGTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTTATTTTTTGGatca > 1:993409‑M1/42‑136 (MQ=255) tgaaattggtcacggtagggaccaactttaaaaatcaaagaCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTTATTTTTTGGatca > 2:1452740‑M1/42‑136 (MQ=255) gaaattggtcacggtagggaccaactttaaaaatcaaagaCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTa < 1:1273976‑M1/64‑1 (MQ=255) gaaattggtcacggtagggaccaactttaaaaatcaaagaCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTTATTTTTTGGatca < 2:2343914‑M1/95‑1 (MQ=255) gaaattggtcacggtagggaccaactttaaaaatcaaagaCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTTATTTTTTGGatca < 1:234461‑M1/95‑1 (MQ=255) gaaattggtcacggtagggaccaactttaaaaatcaaagaCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTTATTTTTTGGatca < 2:1631070‑M1/95‑1 (MQ=255) aaattggtcacggtagggaccaactttaaaaatcaaagaCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTTATTTTTTGGatcatc < 1:110233‑M1/97‑1 (MQ=255) acggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTtat > 2:1959602‑M1/31‑84 (MQ=255) tggaacaactttaaaaatcaaagaCGTAAGCAAATGTGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATTCAGAGGCTAGTTATGTCACAGCCTCTTATTTTTTTGATCATCATTtatttatattta > 1:2174124‑M1/25‑136 (MQ=255) gaccaactttaaaaatcaaagaCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTTATTTTTTGGATCATCATTtatttatattta > 1:1233024‑M1/23‑134 (MQ=255) ccaactttaaaaatcaaagaCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTTATTTTTTGGATCATCATTTATTTATATTTATCaa < 2:537929‑M1/116‑1 (MQ=255) aactttaaaaatcaaagaCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTTATTTTTTGGATCATCATTTATTTATATTTAtcaagg > 1:1922756‑M1/19‑134 (MQ=255) tttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTtat > 1:937848‑M1/16‑69 (MQ=255) tttaaaaatcaaagaCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTTATTTTTTGGATCATCATTTATTTATATTTATCAAAg > 2:2137393‑M1/16‑133 (MQ=255) tttaaaaatcaaagaCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTTATTTTTTGGATCATCATTTATTTATATTTATCAAAGTa < 1:1602602‑M1/120‑1 (MQ=255) tttaaaaatcaaagaCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTTATTTTTTGGATCATCATTTATTTATATTTATCAAAGTa < 2:817121‑M1/120‑1 (MQ=255) taaaaatcaaagaCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTTATTTTTTGGATCATCATTtatttatattta < 1:509733‑M1/112‑1 (MQ=255) taaaaatcaaagaCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTTATTTTTTGGATCATCATTTATTTATATTTATCAAAGTAACg < 2:1777934‑M1/123‑1 (MQ=255) taaaaatcaaagaCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTTATTTTTTGGATCATCATTTATTTATATTTATCAAAGTAACg < 2:435285‑M1/123‑1 (MQ=255) aggcgtaAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTTcgtgttcagttgatttttgattggcggttgcaagcaattcaatctgccgca < 1:1246393‑M1/133‑52 (MQ=255) aggcgtaAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTTcgtgttcagttgatttttgattggcggttgcaagcaattcaatctgccgca < 1:1386941‑M1/133‑52 (MQ=255) ggcgtAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGGTATGTCACAGCCTCGTcgtgttcagttgatttttgtttggcggttgcaagcaattcaatctgccgcag > 2:2442561‑M1/3‑84 (MQ=255) aaGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTTcgtgttcagttgatttttgattggcggttgcaagcaattcaatctgccgcagaatg < 2:2109120‑M1/135‑57 (MQ=255) aaTGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTTcgtgttcagttgatttttgattggcggttgcaagcaattcaatctgccgcagaatgagcctg < 2:105712‑M1/136‑63 (MQ=255) aaTGGGACGAGAAACCAAAATTCGGGTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTTcgtgttcagttgatttttgattggcggttgcaagcaattcaatctgccgcagaatgagcctg < 1:1575557‑M1/136‑63 (MQ=255) ggACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTTcgtgttcagttgatttttgattggcggttgcaagcaattcaatctgccgca > 1:1683239‑M1/1‑70 (MQ=255) ggACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTTATTTTTTGGATCATCATTTATTTATATTTATCAAAGTAACGGTCTGTTATTTTAACGAATGTACTa > 1:1769104/1‑136 (MQ=255) gagaAACCACAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACATCCTCTTATTTTTTGGATCATCATTTATTTATATTTATCAAAGTAACGGTCTGTTATTTTAACGAATGTACTAAatt < 2:1347907/136‑1 (MQ=255) gaAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTTcgtgttcagttgatttttgattggcggttgcaagcaattcaatctgccgcagaatgagcctgtccttgt > 2:2049859‑M1/1‑64 (MQ=255) ccAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTTcgtgttcagttgatttttgattggcggttgcaagcaattcaatctgccgcagaatgagcctgtcctt < 1:683612‑M1/127‑68 (MQ=255) cAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTTcgtgttcagttgatttttgattggcggttgcaagcaattcaatctgccgcagaatgagcctgtccttgtccacaagc < 1:1359573‑M1/136‑78 (MQ=255) cAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTTcgtgttcagttgatttttgattggcggttgcaagcaattcaatctgccgcagaatgagcctgtccttgtccacaagc < 2:1538608‑M1/136‑78 (MQ=255) cAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTTATTTTTTGGATCATCATTTATTTATATTTATCAAAGTAACGGTCTGTTATTTTAACGAATGTACTAAATTATTTTCg < 2:752120/136‑1 (MQ=255) ttCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTTcgtgttcagttgatttttgattggcggttgcaagcaattcaatctgccgcagaatgagcctgtccttgtccacaagccatca < 1:1501349‑M1/136‑83 (MQ=255) ttCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTTATTTTTTGGATCATCATTTATTTATATTTATCAAAGTAACGGTCTGTTATTTTAACGAATGTACTAAATTATTTTCGTTTCTGGTTa < 2:2306868/135‑1 (MQ=255) ttCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTTATTTTTTGGATCATCATTTATTTATATTTATCAAAGTAACGGTCTGTTATTTTAACGAATGTACTAAATTATTTTCGTTTCTGGTTa < 2:1813727/135‑1 (MQ=255) ctcGTCCCATTTGCTTAcgtctttgatttttaaagttggtccctaccgt > 2:589843‑M1/1‑17 (MQ=255) cGTCCCATTTGCTTAcgtctttgatttttaaagttggtccctaccgtgaccaatttcataatgtttaacgccagtattacgattccggcttccttggtgaccttgtcgaaacctcgcaccgagaatcgattgaaat < 2:1592176‑M1/136‑122 (MQ=255) cccATTTGCTTAcgtctttgatttttaaagttggtccctaccgtgaccaatttcataatgtttaacgccagtattacgattccggcttccttggtgaccttgtcgaaacctcgcaccgagaatcgattgaaatgta < 1:2061849‑M1/136‑125 (MQ=255) cccATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTTcgtgttcagttgatttttgattggcggttgcaagcaattcaatctgccgcagaatgagcctgtccttgtccacaagccatcagttcagcttggt < 1:747040‑M1/135‑95 (MQ=255) gCTTATACAGAGGCTAGTTATGTCACAGCCTCTTcgtgttcagttgatttttgattggcggttgcaagcaattcaatctgccgcagaatgagcctgtccttgtccacaagccatcagttcagcttggtaggcatca > 1:198877‑M1/1‑34 (MQ=255) gCTTATACAGAGGCTAGTTATGTCACAGCCTCTTATTTTTTGGATCATCATTTATTTATATTTATCAAAGTAACGGTCTGTTATTTTAACGAATGTACTAAATTATTTTCGTTTCTGGTTACAAGACGCTAAAAGt > 1:1149515/1‑136 (MQ=255) tataCAGAGGCTAGTTATGTCACAGCCTCTTcgtgttcagttgatttttgattggcggttgcaagcaattcaatctgccgcagaatgagcctgtccttgtccacaagccatcagttcagcttggtaggcatcattg < 1:2198674‑M1/136‑106 (MQ=255) tataCAGAGGCTAGTTATGTCACAGCCTCTTcgtgttcagttgatttttgattggcggttgcaagcaattcaatctgccgcagaatgagcctgtccttgtccacaagccatcagttcagcttggtaggcatcattg < 2:2180461‑M1/136‑106 (MQ=255) acgtctttgatttttaaagttggtccctaccgtgaccaatttcataatgtttaacgccagtattacgattccggcttccttggtgaccttgtcgaaacctcgcaccgagaatcgattgaaatgta > 2:641147‑M1/1‑1 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ACGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTTATTTTTTGGATCATCATTTATTTATATTTATCAAAGTAACGGTCTGTTATTTTAACGAATGTACTAAATTATTTTCGTTTCTGGTTACAAGACGCTAAAAGTATT > TrimmedAssembly_T66_contig_2/1‑188 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |