| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | TrimmedAssembly_T66_contig_3 | = 176241 | 237 (1.030) | 189 (0.890) +CAGCAGAACT |
73/238 | 0.2 | 47.8% | coding (374/804 nt) | rasttk_feature_annotation_tool=annotate_proteins_km er_v2 | hypothetical protein |
| ? | TrimmedAssembly_T66_contig_3 | 176327 = | 211 (0.920) | coding (288/804 nt) | rasttk_feature_annotation_tool=annotate_proteins_km er_v2 | hypothetical protein | |||||
Only 100 of 459 total aligned reads displayed.
GTAGCACTTGATGAAGCTTGACTAGTGGTTGCAGCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGTAGCAGAACTAGTAGCTTGGCTAGCAACTGATTGTGAAGAAGCACTAGTAGCACTGGCACTCGTTGCAGTTGAAGCAGCTGAAGAAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGC > TrimmedAssembly_T66_contig_3/176106‑176371 | agCACTTGATGAAGCTTGACTAGTGGTTGCAGCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAgtagta < 1:2237389/136‑1 (MQ=255) aGCACTTGATGAAGCTTGACTAGTGGTTGCAGCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGca < 2:1807537‑M1/136‑3 (MQ=255) aGCACTTGATGAAGCTTGACTAGTGGTTGCAGCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGc < 2:1044124‑M1/135‑2 (MQ=255) aCTTGATGAATATTGACTAGTTGTTGCAGCAGAACTTGAAGCTTGTCTAGCAGCTGATTGAGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGtagtag < 1:2051406/134‑1 (MQ=255) aCTTGATGAAGCTTGACTAGTGGTTGCAGCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGcagca > 1:80645‑M1/1‑131 (MQ=255) aCTTGATGAAGCTTGACTAGTGGTTGCAGCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGcag < 1:2000649‑M1/134‑4 (MQ=255) aCTTGATGAAGCTTGACTAGTGGTTGCAGCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGTAGCa > 2:1984797/1‑136 (MQ=255) aCTTGATGAAGCTTGACTAGTGGTTGCAGCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGTAGCa > 2:159011/1‑136 (MQ=255) aCTTGATGAAGCTTGACTAGTGGTTGCAGCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGTAGCa > 1:9089/1‑136 (MQ=255) aCTTGATGAAGCTTGACTAGTGGTTGCAGCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGTAGCa > 1:1541234/1‑136 (MQ=255) tgatgaAGCTTGACTAGTGGTTGCAGCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGcagcagaa < 1:1320828‑M1/136‑9 (MQ=255) tgatgaAGCTTGACTAGTGGTTGCAGCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGcagcaga > 2:1008553‑M1/1‑128 (MQ=255) atgaAGCTTGACTAGTGGTTGCAGCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGcagcagaact > 2:982983‑M1/1‑126 (MQ=255) aaGCTTGACTAGTGGTTGCAGCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGTAGCAGAACtagt > 1:1036161/1‑136 (MQ=255) ttGACTAGTGGTTGCAGCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGcagcagaactagtagct > 2:2454737‑M1/1‑119 (MQ=255) tGACTAGTGGTTGCAGCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGcagcagaactagtagctt > 2:777885‑M1/1‑118 (MQ=255) tGACTAGTGGTTGCAGCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGcagcagaactagtagctt < 2:1685313‑M1/136‑19 (MQ=255) aCTAGTGGTTGCAGCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGcagcagaactagtagcttg > 1:1691158‑M1/1‑116 (MQ=255) tAGTGGTTGCAGCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGATCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGTCTAGCAGCTGAAGAAGTAGTATCAGAACTAGTAGCTTGGCt > 2:2191634/1‑136 (MQ=255) tAGTGGTTGCAGCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGcagcagaactagtagcttggct > 2:1429464‑M1/1‑114 (MQ=255) aGTGGTTGCAGCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGcagcagaactagtagcttggcta > 2:280135‑M1/1‑113 (MQ=255) ggTTGCAGCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGTAGCAGAACTAGTAGCTTGGCTAg < 2:1732407/134‑1 (MQ=255) gTTGCAGCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGTAGCAGAACTAGTAGCTTGGCTAGCa > 1:1913589/1‑135 (MQ=255) ttGCAGCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGcagcagaactattagattggctagtt > 1:483766‑M1/1‑108 (MQ=255) ttGCAGCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGcagcagaactagtagcttggctagtt > 1:1283004‑M1/1‑108 (MQ=255) ttGCAGCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGcagcagaactagtagcttggctagtt > 1:1341209‑M1/1‑108 (MQ=255) tGCAGCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGcagcagaactagtagcttggctagttgc < 1:2131430‑M1/135‑29 (MQ=255) tGCAGCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGTAGCAGAACTAGTAGCTTGGCTAGCAAc < 1:1016425/135‑1 (MQ=255) agcagAACTTGAAGCTTGGCTAGCAGATGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGTAGCAGAACTAGTAGCTTGGCTAGCAACTGAt > 2:1386580/1‑136 (MQ=255) gcagAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTTAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTAGGCTAGCAGATGAAGAAGTAGTAGCAGAACTACTAGCTTGGCTAGCAACTGAtt > 2:2050850/1‑136 (MQ=255) gcagAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGcagcagaactagtagcttggctagttgctgatt > 1:257073‑M1/1‑103 (MQ=255) gcagAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGTAGCAGAACTAGTAGCTTGGCTAGCAACTGAtt > 2:2233800/1‑136 (MQ=255) gcagAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGTAGCAGAACTAGTAGCTTGGCTAGCAACTGAtt > 2:1928489/1‑136 (MQ=255) aCTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAATTAGCTTGGCTAGCAGCTGAAGAAGTAGTAGCAGAACTAGTAGCTTGGCTAGCAACTGATtgtg < 1:1375679/134‑1 (MQ=255) aCTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGcagcagaactagtagcttggctagttgctgattgtggt < 1:1819984‑M1/136‑39 (MQ=255) aCTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGTAGCAGAACTAGTAGCTTGGCTAGCAACTGATTGTga < 2:737002/135‑1 (MQ=255) ttGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGTAGCAGAACTAGTAGCTTGGCTAGCAACTGATTGTgaaga < 1:589535/136‑1 (MQ=255) aGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGcagcagaactagtagcttggctagttgctgattgtggtgcagc < 2:1159392‑M1/135‑44 (MQ=255) gCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGTAGCAGAACTAGTAGCtt > 2:518778/1‑109 (MQ=255) ttGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGTAGCAGAACTAGTAGCTTGGCTAGCAACTGATTGTGAAGAAGCAc < 1:1984797/134‑1 (MQ=255) tGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGTAGAAGTAGTAGCAGAACTAGTAGCTTGGCTAGCAACTGATTGTGAAGAAGCACtag < 1:44337/136‑1 (MQ=255) tAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCTTTGCAACACTTGAAGTAGCTTGGCTAGCAGATGAAGAAGTAGTAGCAGAACTAGTAGCTTGGCTAGCAACTGATTGTGAAGAAGCACTAGTAGc > 1:522479/1‑136 (MQ=255) tAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGTAGCAGAACTAGTAGCtt < 1:876036/102‑1 (MQ=255) tAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGTAGCAGAACTAGTAGCTTGGCTAGCAACTGATTGTGAAGAATCACTAGTAGc > 2:659582/1‑136 (MQ=255) tAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGTAGCAGAACTAGTAGCTTGGCTAGCAACTGATTGTGAAGAAGCACTAGTAGc > 1:1161405/1‑136 (MQ=255) agcagcTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGcagcagaactagtagcttggctagttgctgattgtggtgcagcacttgtagca < 1:2283412‑M1/136‑54 (MQ=255) agcagcTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGTAGCAGAACTAGTAGCTTGGCTAGCAACTGATTGTGAAGAAGCACTAGTAGc > 2:591626/1‑135 (MQ=255) agcTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGcagcagaactagtagcttggctagttgctgattgtggtgcagcacttgtagcagc < 2:878769‑M1/135‑56 (MQ=255) tGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGcagcagaactagtagcttggctagttgctgattgtggtgcagcacttgtagcagcagaa < 1:673610‑M1/136‑60 (MQ=255) ttGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGcagcagaactagtagcttggctagttgctgattgtggtgcagcacttgtagcagcagaagtc < 1:1562996‑M1/136‑63 (MQ=255) ttGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGcagcagaactagtagcttggctagttgctgattgtggtgcagcacttgtagcagcagaagtc < 1:1767334‑M1/136‑63 (MQ=255) tGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGcagcagaactagtagcttggctagttgctgattgtggtgcagcacttgtagcagcagaagtcgtggt < 2:849854‑M1/135‑68 (MQ=255) tGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGcagcagaactagtagcttggctagttgctgattgtggtgcagcacttgtagcagcagaagtcgtggt < 2:2138608‑M1/135‑68 (MQ=255) tGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGcagcagaactagtagcttggctagttgctgattgtggtgcagcacttgtagcagcagaagtcgtggt > 2:53825‑M1/1‑68 (MQ=255) tGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGcagcagaactagtagcttggctagttgctgattgtggtgcagcacttgtagcagcagaagtcgtggt < 2:315414‑M1/135‑68 (MQ=255) gCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGTAGCAGAACTAGTAGCTTGGCTAGCAACTGATTGTGAAGAAGCACTAGTAGCACTGGCACTCGTTGCAGt < 1:341471/135‑1 (MQ=255) ttGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGTAGCAGAACTAGTAGCTTGGCTAGCAACTGATTGTGAAGAAGCACTAGTAGCACTGGCACTCGTTGCAGTTGa > 2:1146212/1‑136 (MQ=255) gaagaaGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGcagcagaactagtagcttggctagttgctgattgtggtgcagcacttgtagcagcagaagtcgtggttgttgtagtag > 2:911997‑M1/1‑58 (MQ=255) gaagaaGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGTAGCAGAACTAGTAGCTTGGCTAGCAACTGATTGTGAAGAAGCACTAGTAGCACTGGCACTCGTTGCAGTTGAagca > 2:2003179/1‑135 (MQ=255) agcagcACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGcagcagaactagtagcttggctagttgctgattgtggtgcagcacttgtagcagcagaagtcgtggttgttgtagtagtacca > 1:2380880‑M1/1‑53 (MQ=255) agcagcACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGcagcagaactagtagcttggctagttgctgattgtggtgcagcacttgtagcagcagaagtcgtggttgttgtagtagtac < 2:1474952‑M1/134‑82 (MQ=255) agcagcACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGcagcagaactagtagcttggctagttgctgattgtggtgcagcacttgtagcagcagaagtcgtggttgttgtagtagtac < 2:1513200‑M1/134‑82 (MQ=255) agcagcACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGcagcagaactagtagcttggctagttgctgattgtggtgcagcacttgtagcagcagaagtcgtggttgttgtagtagtac < 1:1212718‑M1/134‑82 (MQ=255) agcagcACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGcagcagaactagtagcttggctagttgctgattgtggtgcagcacttgtagcagcagaagtcgtggt < 1:755232‑M1/120‑68 (MQ=255) agcagcACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGTAGCAGAACTAGTAGCTTGGCTAGCAACTGATTGTGAAGAAGCACTAGTAGCACTGGCACTCGTTGCAGTTGAAGCAGCTgaa > 2:405147/1‑136 (MQ=255) caCTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAagtag < 2:1300928/48‑1 (MQ=255) gCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGcagcagaactagtagcttggctagttgctgattgtggtgcagcacttgtagcagcagaagtcgtggttgttgtagtagtaccattgacttcaagct < 1:2335702‑M1/136‑97 (MQ=255) gCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGTAGCAGAACTAGTAGCTTGGCTAGCAACTGATTGTGAAGAAGCACTAGTAGCACTGGCACTCGTTGCAGTTGAAGCAGCTGAAGAAGTAGCTTg > 1:1657685/1‑134 (MQ=255) aaCACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGcagcagaactagtagcttggctagttgctgattgtggtgcagcacttgtagcagcagaagtcgtggttgttgtagtagtaccattgacttcaagctta > 2:2415490‑M1/1‑38 (MQ=255) aaCACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGTAGCAGAACTAGTAGCTTGGCTAGCAACTGATTGTGAAGAAGCACTAGTAGCACTGGCACTCGTTGCAGTTGAAGCAGCTGAAGAAGTAGCTTGGCTa > 1:2432449/1‑136 (MQ=255) aaCACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGTAGCAGAACTAGTAGCTTGGCTAGCAACTGATTGTGAAGAAGCACTAGTAGCACTGGCACTCGTTGCAGTTGAAGCAGCTGAAGAAGTAGCTTGGCTa < 1:405147/136‑1 (MQ=255) acTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGTAGCAGAACTAGTAGCTTGGCTAGCAACTGATTGTGAAGAAGCACTAGTAGCACTGGCACTCGTTGCAGTTGAAGCAGCTGAAGAAGTAGCTTGGCTAGtt > 1:1142817/1‑136 (MQ=255) acTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGTAGCAGAACTAGTAGCTTGGCTAGCAACTGATTGTGAAGAAGCACTAGTAGCACTGGCACTCGTTGCAGTTGAAGCAGCTGAAGAAGTAGCTTGGCTAGtt > 2:125674/1‑136 (MQ=255) aaGTAGCTTGGCTAGCAGCTGAAGAAGTAGcagcagaactagtagcttggctagttgctgattgtggtgcagcacttgtagcagcagaagtcgtggttgttgtagtagtaccattgacttcaagcttatcaccaat > 1:955467‑M1/1‑30 (MQ=255) aaGTAGCTTGGCTAGCAGCTGAAGAAGTAGcagcagaactagtagcttggctagttgctgattgtggtgcagcacttgtagcagcagaagtcgtggttgttgtagtagtaccattgacttcaagcttatcaccaat > 1:2195335‑M1/1‑30 (MQ=255) aaGTAGCTTGGCTAGCAGCTGAAGAAGTAGcagcagaactagtagcttggctagtt > 2:2286010‑M1/1‑30 (MQ=255) aGTAGCTTGGCTAGCAGCTGAAGAAGTAGTAGCAGAACTAGTAGCTTGGCTAGCAACTGATTGTGAAGAAGCACTAGTAGCACTGGCACTCGTTGCAGTTGAAGCAGCTGAAGAAGTAGCTTGGCTAGTTGCTGa < 1:1494354/135‑1 (MQ=255) gTAGCTTGGCTAGCAGCTGAAGAAGTAGTAGCAGAACTAGTAGCTTGGCTAGCAACTGATTGTGAAGAAGCACTAGTAGCACTGGCACTCGTTGCAGt < 1:298091/98‑1 (MQ=255) gTAGCTTGGCTAGCAGCTGAAGAAGTAGTAGCAGAACTAGTAGCTTGGCTAGCAACTGATTGTGAAGAAGCACTAGTAGCACTGGCACTCGTTGCAGTTGAAGCAGCTGAAGAAGTAGCTTGGCTAGTTGCTGAtt > 2:18616/1‑136 (MQ=255) gTAGCTTGGCTAGCAGCTGAAGAAGTAGTAGCAGAACTAGTAGCTTGGCTAGCAACTGATTGTGAAGAAGCACTAGTAGCACTGGCACTCGTTGCAGTTGAAGCAGCTGAAGAAGTAGCTTGGCTAGTTGCTGAtt > 2:1628306/1‑136 (MQ=255) ttGGCTAGCAGCTGAAGAAGTAGcagcagaactagtagcttggctagttgctgattgtggtgcagcacttgtagcagcagaagtcgtggttgttgtagtagtaccattgacttcaagcttatcaccaatgaagatt < 2:34780‑M1/136‑114 (MQ=255) ttGGCTAGCAGCTGAAGAAGTAGTAGCAGAACTAGTAGCTTGGCTAGCAACTGATTGTGAAGAAGCACTAGTAGCACTGGCACTCGTTGCAGTTGAAGCAGCTGAAGAAGTAGCTTGGCTAGTTGCTGATTgtggt < 1:2205757/136‑1 (MQ=255) ttGGCTAGCAGCTGAAGAAGTAGTAGCAGAACTAGTAGCTTGGCTAGCAACTGATTGTGAAGAAGCACTAGTAGCACTGGCACTCGTTGCAGTTGAAGCAGCTGAAGAAGTAGCTTGGCTAGTTGCTGATTgtggt < 2:445301/136‑1 (MQ=255) ggCTAGCAGCTGAAGAAGTAGcagcagaactagtatcttggctagttgatgattgtggtgcagcacttgtagcagcagaagtcgtggtggttgtagtagtaccatttacttcaagcttatcaccaatgaatattaa > 1:1936656‑M1/1‑21 (MQ=255) ggCTAGCAGCTGAAGAAGTAGTAGCAGAACTAGTAGCTTGGCTAGCAACTGATTGTGAAGAAGCACTAGTAGCACTGGCACTCGTTGCAGTTGAAGCAGCTGAAGAAGTAGCTTGGCTAGTTGCTGATTGTGGTgc > 1:1440334/1‑136 (MQ=255) ggCTAGCAGCTGAAGAAGTAGTAGCAGAACTAGTAGCTTGGCTAGCAACTGATTGTGAAGAAGCACTAGTAGCACTGGCACTCGTTGCAGTTGAAGCAGCTGAAGAAGTAGCTTGGCTAGTTGCTGATTGTGGTgc < 1:153123/136‑1 (MQ=255) ggCTAGCAGCTGAAGAAGTAGTAGCAGAACTAGTAGCTTGGCTAGCAACTGATTGTGAAGAAGCACTAGTAGCACTGGCACTCGTTGCAGTTGAAGCAGCTGAAGAAGTAGCTTGGCTAGTTGCTGATTGTGGTgc > 1:1590930/1‑136 (MQ=255) ggCTAGCAGCTGAAGAAGTAGTAGCAGAACTAGTAGCTTGGCTAGCAACTGATTGTGAAGAAGCACTAGTAGCACTGGCACTCGTTGCAGTTGAAGCAGCTGAAGAAGTAGCTTGGCTAGTTGCTGATTGTGGTgc > 2:1328657/1‑136 (MQ=255) ggCTAGCAGCTGAAGAAGTAGTAGCAGAACTAGTAGCTTGGCTAGCAACTGATTGTGAAGAAGCACTAGTAGCACTGGCACTCGTTGCAGTTGAAGCAGCTGAAGAAGTAGCTTGGCTAGTTGCTGATTGTGGTgc > 1:1412044/1‑136 (MQ=255) agcagcTGAAGAAGTAGTAGCAGAACTAGTAGCTTGGCTAGCAACTGATTGTGAAGAAGCACTAGTAGCACTGGCACTCGTTGCAGTTGAAGCAGCTGAAGAAGTAGCTTGGCTAGTTGCTGATTGTGGTgcagc > 2:441748/1‑135 (MQ=255) agcTGAAGAAGTAGcagcagaactagtagcttggctagttgctgattgtggtgcagcacttgtagcagcagaagtcgtggttgttgtagtagtaccattgacttcaagcttatcaccaatgaagattaagttaa < 2:2355869‑M1/134‑121 (MQ=255) agcTGAAGAAGTAGcagcagaactagtagcttggctagttgctgattgtggtgcagcacttgtagcagcagaagtcgtggttgttgtagtagtaccattgacttcaagcttatcaccaatgaagattaagttaa < 2:684847‑M1/134‑121 (MQ=255) agcTGAAGAAGTAGcagcagaactagtagcttggctagttgctgattgtggtgcagcacttgtagcagcagaagtcgtggttgttgtagtagtaccattgacttcaagcttatcaccaatgaagattaagttaa < 2:2297823‑M1/134‑121 (MQ=255) cTGAAGAAGTAGcagcagaactagtagcttggctagttgctgattgtggtgcagcacttgtagcagcagaagtcgtggttgttgtagtagtaccattgacttcaagcttatcaccaatgaagattaagttaacatt > 2:2082246‑M1/1‑12 (MQ=255) cTGAAGAAGTAGcagcagaactagtagcttggctagttgctgattgtggtgcagcactagtagcagcagaagtcgtggttgttgtagtagtaccattgacttcaagcttatcaccaatgaagattaagttaacatt > 1:730706‑M1/1‑12 (MQ=255) cTGAAGAAGTAGTAGCAGAACTAGTATCTTGGATAGCAACTGATTGTGAAGAAGCACTAGTAGCACTGGCACTCGTAGCAGTTGAAGCAGCTGAAGAAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTAGt > 1:2363673/1‑136 (MQ=255) cTGAAGAAGTAGTAGCAGAACTAGTAGCTTGGCTAGCAACTGATTGTGAAGAAGCACTAGTAGCACTGGCACTCGTTGCAGTTGAAGCAGCTGAAGAAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGt > 2:1086125/1‑136 (MQ=255) agtagtagtAGCAGAACTAGTAGCTTGGCTAGCAACTGTTTGTGAAGATGCACTAGTAGCACTGGCACTCGTTGCAGTTGAAGCAGCTGAAGAAGTAGCTTGGCTAGTTGCTGATTGTGGTGGAGCACTTGTagca < 2:1559736/133‑1 (MQ=255) aagTAGcagcagaactagtagcttggctagttgctgattgtggtgcagcacttgtagcagcagaagtcgtggttgttgtagtagtaccattgacttcaagcttatcaccaatgaagattaagttaacattagcta > 1:605761‑M1/1‑6 (MQ=255) agtagtAGCAGAACTAGTAGCTTGGCTAGCAACTGATTGTGAAGAAGCACTAGTAGCACTGGCACTCGTTGCAGTTGAAGCAGCTGAAGAAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTagcag < 2:2400722/134‑1 (MQ=255) | GTAGCACTTGATGAAGCTTGACTAGTGGTTGCAGCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGTAGCAGAACTAGTAGCTTGGCTAGCAACTGATTGTGAAGAAGCACTAGTAGCACTGGCACTCGTTGCAGTTGAAGCAGCTGAAGAAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGC > TrimmedAssembly_T66_contig_3/176106‑176371 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |