| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | TrimmedAssembly_T66_contig_2 | = 83 | 132 (0.560) | 115 (0.540) | 38/254 | 3.0 | 63.9% | coding (82/180 nt) | rasttk_feature_annotation_tool=elepa@bvbrc | hypothetical protein |
| ? | TrimmedAssembly_T66_contig_5 | = 187151 | 0 (0.000) | intergenic (+38/–) | rasttk_feature_annotation_tool=elepa@bvbrc/– | hypothetical protein/– | |||||
Only 100 of 116 total aligned reads displayed.
ACGGAATTTCACCAAGCACTCAATCGCATCAATGATGCCTACCAAGCTGAACTGATGGCTTGTGGACAAGGACAGGCTCATTCTGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AA > TrimmedAssembly_T66_contig_5/187018‑187153 | cGGAATTTCACCAAGCACTCAATCGCATCAATGATGCCTACCAAGCTGAACTGATGGCTTGTGGACAAGGACAGGCTCATTCTGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaag < 1:2087324‑M2/136‑4 (MQ=255) aaTTTCACCAAGCACTCAATCGCATCAATGATGCCTACCAAGCTGAACTGATGGCTTGTGGACAAGGACAGGCTCATTCTGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagag > 2:548627‑M2/1‑130 (MQ=255) aaTTTCACCAAGCACTCAATCGCATCAATGATGCCTACCAAGCTGAACTGATGGCTTGTGGACAAGGACAGGCTCATTCTGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagag > 1:1885299‑M2/1‑130 (MQ=255) aaTTTCACCAAGCACTCAATCGCATCAATGATGCCTACCAAGCTGAACTGATGGCTTGTGGACAAGGACAGGCTCATTCTGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagag > 2:1685393‑M2/1‑130 (MQ=255) aaTTTCACCAAGCACTCAATCGCATCAATGATGCCTACCAAGCTGAACTGATGGCTTGTGGACAAGGACAGGCTCATTCTGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagag > 2:178083‑M2/1‑130 (MQ=255) aaTTTCACCAAGCACTCAATCGCATCAATGATGCCTACCAAGCTGAACTGATGGCTTGTGGACAAGGACAGGCTCATTCTGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagag > 2:2419217‑M2/1‑130 (MQ=255) aaTTTCACCAAGCACTCAATCGCATAAATGATGACTACCAAGCTGAACTGATGGCTTGTGGACAAGGACAGGCTCATTCTGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagag > 2:1933934‑M2/1‑130 (MQ=255) ttCACCAAGCACTCAATCGCATCAATGATGTCTACCAAGCTGAACTGATGGCTTGTGGACAAGGACAGGCTCATTCTGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagaggctg > 1:475430‑M2/1‑127 (MQ=255) ttCACCAAGCACTCAATCGCATCAATGATGTCTACCAAGCTGAACTGATGGCTTGTGGACAAGGACAGGCTCATTCTGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagaggctg > 1:475558‑M2/1‑127 (MQ=255) ttCACCAAGCACTCAATCGCATCAATGATGCCTACCAAGCTGAACTGATGGCTTGTGGACAAGGACAGGCTCATTCTGCTGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagaggctg > 2:183951‑M2/1‑127 (MQ=255) ttCACCAAGCACTCAATCGCATCAATGATGCCTACCAAGCTGAACTGATGGCTTGTGGACAAGGACAGGCTCATTCTGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagaggctg > 1:2194829‑M2/1‑127 (MQ=255) ttCACCAAGCACTCAATCGCATCAATGATGCCTACCAAGCTGAACTGATGGCTTGTGGACAAGGACAGGCTCATTCTGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagaggctg > 1:920279‑M2/1‑127 (MQ=255) ttCACCAAGCACTCAATCGCATCAATGATGCCTACCAAGCTGAACTGATGGCTTGTGGACAAGGACAGGCTCATTCTGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagaggctg > 2:1637809‑M2/1‑127 (MQ=255) ttCACCAAGCACTCAATCGCATCAATGATGCCTACCAAGCTGAACTGATGGCTTGTGGACAAGGACAGGCTCATTCTGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagaggctg > 2:2084222‑M2/1‑127 (MQ=255) ttCACCAAGCACTCAATCGCATCAATGATGCCTACCAAGCTGAACTGATGGCTTGTGGACAAGGACAGGCTCATTCTGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagaggctg > 2:2264022‑M2/1‑127 (MQ=255) ttCACCAAGCACTCAATCGCATCAATGATGCCTACCAAGCTGAACTGATGGCTTGTGGACAAGGACAGGCTCATTCTGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagaggctg > 1:1306688‑M2/1‑127 (MQ=255) cACCAAGCACTCAATCGCATCAATGATGCCTACCAAGCTGAACTGATGGCTTGTGGACAAGGACAGGCTCATTCTGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagaggctgtg > 1:143858‑M2/1‑125 (MQ=255) cACCAAGCACTCAATCGCATCAATGATGCCTACCAAGCTGAACTGATGGCTTGTGGACAAGGACAGGCTCATTCTGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagaggctgtg > 1:771177‑M2/1‑125 (MQ=255) aCCAAGCACTCAATCGCATCAATGATGCCTACCAAGCTGAACTGATGGCTTGTGGACAAGGACAGGCTCATTCTGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagaggctgtg < 2:1843746‑M2/135‑12 (MQ=255) aGCACTCAATCGCATCAATGATGCCTACCAAGCTGAACTGATGGCTTGTGGACAAGGACAGGCTCATTCTGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagaggctgtgacata > 1:1886084‑M2/1‑120 (MQ=255) aCTCAATCGCATCAATGATGCCTACCAAGCTGAACTGATGGCTTGTGGACAAGGACAGGCTCATTCTGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagaggctgtgacataact > 1:2153310‑M2/1‑117 (MQ=255) aCTCAATCGCATCAATGATGCCTACCAAGCTGAACTGATGGCTTGTGGACAAGGACAGGCTCATTCTGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagaggctgtgacataact > 1:1896554‑M2/1‑117 (MQ=255) aCTCAATCGCATCAATGATGCCTACCAAGCTGAACTGATGGCTTGTGGACAAGGACAGGCTCATTCTGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagaggctgtgacataact > 1:1196696‑M2/1‑117 (MQ=255) aCTCAATCGCATCAATGATGCCTACCAAGCTGAACTGATGGCTTGTGGACAAGGACAGGCTCATTCTGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagaggctgtgacataact > 1:532028‑M2/1‑117 (MQ=255) aCTCAATCGCATCAATGATGCCTACCAAGCTGAACTGATGGCTTGTGGACAAGGACAGGCTCATTCTGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagaggctgtgacataact < 1:1272533‑M2/136‑20 (MQ=255) aCTCAATCGCATCAATGATGCCTACCAAGCTGAACTGATGGCTTGTGGACAAGGACAGGCTCATTCTGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagaggctgtgacataact > 2:1143132‑M2/1‑117 (MQ=255) aCTCAATCGCATCAATGATGCCTACCAAGCTGAACTGATGGCTTGTGGACAAGGACAGGCTCATTCTGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagaggctgtgacataact > 2:29575‑M2/1‑117 (MQ=255) tCAATCGCATCAATGATGCCTACCAAGCTGAACTGATGGCTTGTGGACAAGGACAGGCTCATTCTGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagaggctgtgacataactag > 1:1115823‑M2/1‑115 (MQ=255) tCAATCGCATCAATGATGCCTACCAAGCTGAACTGATGGCTTGTGGACAAGGACAGGCTCATTCTGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagaggctgtgacataactag > 1:2091725‑M2/1‑115 (MQ=255) tCAATCGCATCAATGATGCCTACCAAGCTGAACTGATGGCTTGTGGACAAGGACAGGCTCATTCTGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagaggctgtgacataactag > 1:925187‑M2/1‑115 (MQ=255) aTCGCATCAATGATGCCTACCAAGCTGAACTGATGGCTTGTGGACAAGGACAGGCTCATTCTGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagaggctgtgacataactag < 1:165108‑M2/133‑22 (MQ=255) aTCGCATCAATGATGCCTACCAAGCTGAACTGATGGCTTGTGGACAAGGACAGGCTCATTCTGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagaggctgtgacataactag > 2:165108‑M2/1‑112 (MQ=255) cGCATCAATGATGCCTACCAAGCTGAACTGATGGCTTGTGGACAAGGACAGGCTCATTCTGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagaggctgtgacataactagcctct > 2:1343883‑M2/1‑110 (MQ=255) cGCATCAATGATGCCTACCAAGCTGAACTGATGGCTTGTGGACAAGGACAGGCTCATTCTGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagaggctgtgacataactagcctct > 1:1364960‑M2/1‑110 (MQ=255) aTCAATGATGCCTACCAAGCTGAACTGATGGCTTGTGGACAAGGACAGGCTCATTCTGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagaggctgtgacataactagcctctgta > 2:1519641‑M2/1‑107 (MQ=255) cAATGATGCCTACCAAGCTGAACTGATGGCTTGTGGACAAGGACAGGCTCATTCTGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagaggctgtgacataactagcctctgtata < 2:721610‑M2/136‑32 (MQ=255) cAATGATGCCTACCAAGCTGAACTGATGGCTTGTGGACAAGGACAGGCTCATTCTGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagaggctgtgacataactagcctctgtata < 1:140327‑M2/136‑32 (MQ=255) cAATGATGCCTACCAAGCTGAACTGATGGCTTGTGGACAAGGACAGGCTCATTCTGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagaggctgtgacataactagcctctgtata < 1:2198674‑M2/136‑32 (MQ=255) cAATGATGCCTACCAAGCTGAACTGATGGCTTGTGGACAAGGACAGGCTCATTCTGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagaggctgtgacataactagcctctgtata < 2:2180461‑M2/136‑32 (MQ=255) cAATGATGCCTACCAAGCTGAACTGATGGCTTGTGGACAAGGACAGGCTCATTCTGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagaggctgtgacataactagcctctgtata < 1:416638‑M2/136‑32 (MQ=255) cAATGATGCCTACCAAGCTGAACTGATGGCTTGTGGACAAGGACAGGCTCATTCTGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagaggctgtgacata < 1:467315‑M2/121‑17 (MQ=255) cAATGATGCCTACCAAGCTGAACTGATGGCTTGTGGACAAGGACAGGCTCATTCTGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagaggctgtgacata > 2:467315‑M2/1‑105 (MQ=255) aaTGATGCCTACCAAGCTGAACTGATGGCTTGTGGACAAGGACAGGCTCATTCTGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagaggctgtgacataactagcctctgtataa < 2:1672140‑M2/136‑33 (MQ=255) aaTGATGCCTACCAAGCTGAACTGATGGCTTGTGGACAAGGACAGGCTCATTCTGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagaggctgtgacataactagcctctgtataa < 2:757334‑M2/136‑33 (MQ=255) tgatgCCTACCAAGCTGAACTGATGGCTTGTGGACAAGGACAGGCTCATTCTGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagaggctgtgacataactagcctctgtataagc > 1:198877‑M2/1‑102 (MQ=255) tgatgCCTACCAAGCTGAACTGATGGCTTGTGGACAAGGACAGGCTCATTCTGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagaggctgtgacataactagcctctgtataagc < 1:1601052‑M2/136‑35 (MQ=255) tgatgCCTACCAAGCTGAACTGATGGCTTGTGGACAAGGACAGGCTCATTCTGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagaggctgtgacataactagcctctgtataagc > 1:198953‑M2/1‑102 (MQ=255) aCCAAGCTGAACTGATGGCTTGTGGACAAGGACAGGCTCATTCTGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagaggctgtgacataactagcctctgtataagcaaatggg < 2:2280516‑M2/135‑42 (MQ=255) aCCAAGCTGAACTGATGGCTTGTGGACAAGGACAGGCTCATTCTGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagaggctgtgacataactagcctctgtataagcaaatggg < 2:546732‑M2/135‑42 (MQ=255) aCCAAGCTGAACTGATGGCTTGTGGACAAGGACAGGCTCATTCTGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagaggctgtgacataactagcctctgtataagcaaatggg < 1:1819757‑M2/135‑42 (MQ=255) aCCAAGCTGAACTGATGGCTTGTGGACAAGGACAGGCTCATTCTGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagaggctgtgacataactagcctctgtataagcaaatggg < 2:1583295‑M2/135‑42 (MQ=255) aaGCTGAACTGATGGCTTGTGGACAAGGACAGGCTCATTCTGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagaggctgtgacataactagcctctgtataagcaaatgggacga < 1:2194567‑M2/136‑46 (MQ=255) aGCTGAACTGATGGCTTGTGGACAAGGACAGGCTCATTCTGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagaggctgtgacata < 1:1569156‑M2/106‑17 (MQ=255) aCTGATGGCTTGTGGACAAGGACAGGCTCATTCTGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagaggctgtgacataactagcctctgtataagcaaatgggacgagaaaccg < 1:356664‑M2/136‑53 (MQ=255) tGATGGCTTGTGGACAAGGACAGGCTCATTCTGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagaggctgtgacataactagcctctgtataagcaaatgggacgagaaaccgaa < 1:2073945‑M2/136‑55 (MQ=255) tGATGGCTTGTGGACAAGGACAGGCTCATTCTGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagaggctgtgacataactagcctctgtataagcaaatgggacgagaaaccgaa < 1:1068959‑M2/136‑55 (MQ=255) tGATGGCTTGTGGACAAGGACAGGCTCATTCTGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagaggctgtgacataactagcctctgtataagcaaatgggacgagaaaccgaa < 1:1501349‑M2/136‑55 (MQ=255) tGATGGCTTGTGGACAAGGACAGGCTCATTCTGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagaggctgtgacataactagcctctgtataagcaaatgggacgagaaaccgaa < 1:2024997‑M2/136‑55 (MQ=255) tGATGGCTTGTGGACAAGGACAGGCTCATTCTGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagaggctgtgacataactagcctctgtataagcaaatgggacgagaaaccgaa < 1:347917‑M2/136‑55 (MQ=255) tGATGGCTTGTGGACAAGGACAGGCTCATTCTGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagaggctgtgacataact > 2:815066‑M2/1‑82 (MQ=255) tGATGGCTTGTGGACAAGGACAGGCTCATTCTGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagaggctgtgacataact < 1:815066‑M2/101‑20 (MQ=255) gCTTGTGGACAAGGACAGGCTCATTCTGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagaggctgtgacataactagcctctgtataagcaaatgggacgagaaaccgaattttg < 2:1538608‑M2/136‑60 (MQ=255) gCTTGTGGACAAGGACAGGCTCATTCTGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagaggctgtgacataactagcctctgtataagcaaatgggacgagaaaccgaattttg < 1:257406‑M2/136‑60 (MQ=255) ttGTGGACAAGGACAGGCTCATTCTGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagaggctgtgacataactagcctctgtataagcaaatgggacgagaaaccgaattttggt < 2:266754‑M2/136‑62 (MQ=255) tgGACAAGGACAGGCTCATTCTGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagaggctgtgacataactagcctctgtataagcaaatgggacgagaaaccgaattttggtt < 1:1384156‑M2/134‑63 (MQ=255) gACAAGGACAGGCTCATTCTGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagaggctgtgacataactagcctctgtataagcaaatgggacgagaaaccgaattttggtttctc < 2:565317‑M2/136‑67 (MQ=255) gACAAGGACAGGCTCATTCTGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagaggctgtgacataactagcctctgtataagcaaatgggacgagaaaccgaattttggtttctc < 2:2374547‑M2/136‑67 (MQ=255) aCAAGGACAGGCTCATTCTGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagaggctgtgacataactagcctctgtataagcaaatgggacgagaaaccgaattttggtttctcg < 1:368622‑M2/136‑68 (MQ=255) aCAAGGACAGGCTCATTCTGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagaggctgtgacataactagcctctgtataagcaaatgggacgagaaaccgaattttggtttc < 1:2049859‑M2/133‑65 (MQ=255) aCAAGGACAGGCTCATTCTGCGGCAGATTGAATTGCTTGCAACCGCCAAACAAACATCAACTGAACACGaagaggctgtgacataactatcctctgtataagcaaatgcgacgagaaaccgaatttaggtatctcg < 2:298527‑M2/136‑68 (MQ=255) aaGGACAGGCTCATTCTGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagaggctgtgacataactagcctctgtataagcaaatgggacgagaaaccgaattttgg > 2:683612‑M2/1‑67 (MQ=255) aaGGACAGGCTCATTCTGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagaggctgtgacataactagcctctgtataagcaaatgggacgagaaaccgaattttgg < 1:683612‑M2/127‑61 (MQ=255) aGGACAGGCTCATTCTGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagaggctgtgacataactagcctctgtataagcaaatgggacgagaaaccgaattttggtttctcgtcc > 1:1843746‑M2/1‑66 (MQ=255) aGGACAGGCTCATTCTGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagaggctgtgacataactagcctctgtataagcaaatgggacgagaaaccgaattttggtttctcgtcc > 1:1583295‑M2/1‑66 (MQ=255) gACAGGCTCATTCTGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagaggctgtgacataactagcctctgtataagcaaatgggacgagaaaccgaattttggtttctcgtccca < 1:1231964‑M2/136‑73 (MQ=255) cAGGCTCATTCTGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagaggctgtgacataactagcctctgtataagcaaatgggacgagaacccgaattttggtttctcgtcccatt < 1:1575557‑M2/136‑75 (MQ=255) cAGGCTCATTCTGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagaggctgtgacataactagcctctgtataagcaaatgggacgagaaaccgaattttggtttctcgtcccatt < 2:1118766‑M2/136‑75 (MQ=255) cAGGCTCATTCTGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagaggctgtgacataactagcctctgtataagcaaatgggacgagaaaccgaattttggtttctcgtcccatt < 2:105712‑M2/136‑75 (MQ=255) cAGGCTCATTCTGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagaggctgtgacataactagcctctgtataagcaaatgggacgagaaaccgaattttggtttctcgtcc < 2:476632‑M2/132‑71 (MQ=255) cAGGCTCATTCTGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagaggctgtgacataactagcctctgtataagcaaatgggacgagaaaccgaattttggtttctcgtcc > 1:476632‑M2/1‑62 (MQ=255) cATTCTGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagaggctgtgacataactagcctctgtataagcaaatgggacgagaaaccgaattttggtttctcgtcccatttgctt < 2:372079‑M2/135‑80 (MQ=255) cATTCTGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagaggctgtgacataactagcctctgtataagcaaatgggacgagaaaccgaattttggtttctcgtcccatttgctt < 2:1426967‑M2/135‑80 (MQ=255) cATTCTGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagaggctgtgacataactagcctctgtataagcaaatgggacgagaaaccgaattttggtttctcgtcccatttgctt < 1:928205‑M2/135‑80 (MQ=255) cATTCTGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagaggctgtgacataactagcctctgtataagcaaatgggacgagaaaccgaattttggtttctcgtcccatttgctt < 1:1916863‑M2/135‑80 (MQ=255) cATTCTGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagaggctgtgacataactagcctctgtataagcaaatgggacgagaaaccgaattttggtttctcgtcccatttgctt < 2:2109120‑M2/135‑80 (MQ=255) ttCTGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagaggctgtgacataactagcctctgtataagcaaatgggtcgagaaaccgaattttggtttctcgtcccatttgcttac < 2:638908‑M2/135‑82 (MQ=255) cTGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagaggctgtgacataactagcctctgtataagcaaatgggacgagaaaccgaattttggtttctcgtcccatttgcttacgcc > 2:1916863‑M2/1‑52 (MQ=255) cTGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagaggctgtgacataactagcctctgtataagcaaatgggacgagaaaccgaattttggtttctcgtcccatttgcttacgcc > 2:1501349‑M2/1‑52 (MQ=255) cTGCGGCAGATTGAATTGCTTGCAACCGCCAAACAAAAATCAACTGAACACGacgaggctgtgacatacctagcctctgtataagcaaatgggacgagaaaccgaattttggtttctcgtcccatttgcttacgcc > 2:2442561‑M2/1‑52 (MQ=255) tGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagaggctgtgacataactagcctctgtataagcaaatgggacgagaaaccgacttttggtttctcgtcccatttgcttacgcct < 2:2437561‑M2/136‑86 (MQ=255) tGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagaggctgtgacataactagcctctgtataagcaaatgggacgagaaaccgaattttggtttctcgtcccatttgcttacgcct < 2:1896578‑M2/136‑86 (MQ=255) tGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagaggctgtgacataactagcctctgtataagcaaatgggacgagaaaccgaattttggtttctcgtcccatttgcttacgcct < 2:2437738‑M2/136‑86 (MQ=255) tGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagaggctgtgacataactagcctctgtataagcaaatgggacgagaaaccgaattttggtttctcgtcccatttgcttacgcct < 1:1573201‑M2/136‑86 (MQ=255) tGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagaggctgtgacataactagcctctgtataagcaaatgggacgagaaaccgaattttggtttctcgtcccatttgcttacgcct < 1:1246393‑M2/136‑86 (MQ=255) tGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagaggctgtgacataactagcctctgtataagcaaatgggacgagaaaccgaattttggtttctcgtcccatttgcttacgcct < 1:1386941‑M2/136‑86 (MQ=255) tGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagaggctgtgacataactagcctctgtataagcaaatgggacgagaaaccgaattttggtttctcgtcccatttgcttacgcct < 1:1865635‑M2/136‑86 (MQ=255) tGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagaggctgtgacataactagcctctgtataagcaaatgggacgagaaaccgaattttggtttctcgtcc < 2:1683239‑M2/121‑71 (MQ=255) tGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACGaagaggctgtgacataactagcctctgtataagcaaatgggacgagaaaccgaattttggtttctcgtcc > 1:1683239‑M2/1‑51 (MQ=255) tgcttgcAACCGCCAATCAAAAATCAACTGAACACGaagaggctgtgacataactagcctctgtataagcaaatgggacgagaaaccgaattttggtttct > 1:742574‑M2/1‑36 (MQ=255) tgcttgcAACCGCCAATCAAAAATCAACTGAACACGaagaggctgtgacataactagcctctgtataagcaaatgggacgagaaaccgaattttggtttct < 2:742574‑M2/101‑66 (MQ=255) | ACGGAATTTCACCAAGCACTCAATCGCATCAATGATGCCTACCAAGCTGAACTGATGGCTTGTGGACAAGGACAGGCTCATTCTGCGGCAGATTGAATTGCTTGCAACCGCCAATCAAAAATCAACTGAACACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AA > TrimmedAssembly_T66_contig_5/187018‑187153 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |