| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | TrimmedAssembly_T66_contig_40 | = 631 | 0 (0.000) | 185 (0.570) | 67/258 | 0.1 | 100% | coding (1/420 nt) | rasttk_feature_annotation_tool=annotate_proteins_km er_v2 | Mobile element protein |
| ? | TrimmedAssembly_T66_contig_41 | = 437 | 0 (0.000) | coding (435/435 nt) | rasttk_feature_annotation_tool=annotate_proteins_km er_v2 | Mobile element protein | |||||
Only 100 of 433 total aligned reads displayed.
GAATGTCCGCCAGCACCGAGTGAGCGAAAATCGTGGGAAATTTACAAGTGGGACTTCCATCGAACAACGGCCAACAACTGTTAATCAACGGTTAGCTTTTGGTCATTGGGAAGTAGATACGGTGCTTTCTAGTCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > TrimmedAssembly_T66_contig_41/302‑437 | gAATGTCCGCCAGCACCGAGTGAGCGAAAATCGTGGGAAATTTACAAGTGGGACTTCCATCGAACAACGGCCAACAACTGTTAATCAACGGTTAGCTTTTGGTCATTGGGAAGTAGATACGGTGCTTTCTAGTCGa > 1:494067/1‑136 (MQ=255)gAATGTCCGCCAGCACCGAGTGAGCGAAAATCGTGGGAAATTTACAAGTGGGACTTCCATCGAACAACGGCCAACAACTGTTAATCAACGGTTAGCTTTTGGTCATTGGGAAGTAGATACGGTGCTTTCTAGTCGa > 1:2163641/1‑136 (MQ=255)gAATGTCCGCCAGCACCGAGTGAGCGAAAATCGTGGGAAATTTACAAGTGGGACTTCCATCGAACAACGGCCAACAACTGTTAATCAACGGTTAGCTTTTGGTCATTGGGAAGTAGATACGGTGCTTTCTAGTCGa > 1:2011289/1‑136 (MQ=255)gAATGTCCACCAGCACCGAGTGAGCGAAAATCGTGGGAAATTTACAAGTGGGACTTCCATCGAACAACGGCCAACAACTGTTAATCAACGGTTAGCTTTTGGTCATTGGGAAGTAGATACGGTGCTTTCTAGTCGa > 1:2136478/1‑136 (MQ=255)gAATGTCCACCAGCACCGAGTGAGCGAAAATCGTGGGAAATTTACAAGTGGGACTTCCATCGAACAACGGCCAACAACTGTTAATCAACGGTTAGCTTTTGGTCATTGGGAAGTAGATACGGTGCTTTCTAGTCGa > 1:1604615/1‑136 (MQ=255) aaTGTCCGCCAGCACCGAGTGAGCGAAAATCGTGGGAAATTTACAAGTGGGACTTCCATCGAACAACGGCCAACAACTGTTAATCAACGGTTAGCTTTTGGTCATTGGGAAGTAGATACGGTGCTTTCTAGTCGa < 2:118715/135‑1 (MQ=255) aaTGTCCACCAGCACCGAGTGAGCGAAAATCGTGGGAAATTTACAAGTGGGACTTCCATCGAACAACGGCCAACAACTGTTAATCAACGGTTAGCTTTTGGTCATTGGGAAGTAGATACGGTGCTTTCTAGTCGa < 2:659467/135‑1 (MQ=255) tCCGCCAGCACCGAGTGAGCGAAAATCGTGGGAAATTTACAAGTGGGACTTCCATCGAACAACGGCCAACAACTGTTAATCAACGGTTAGCTTTTGGTCATTGGGAAGTAGATACGGTGCTTTCTAGTCGAagtga < 2:2294966‑M2/136‑6 (MQ=255) tCCGCCAGCACCGAGTGAGCGAAAATCGTGGGAAATTTACAAGTGGGACATCCATCGAACAACGGCCAACAACTGTTAATCAACGGTTAGCTTTTGGTCATTGGGAAGTAGATACGGTGCTTTCTAGTCGAagtga < 2:2047991‑M2/136‑6 (MQ=255) ccaccaGCACCGAGTGAGCGAAAATCGTGGGAAATTTACAAGTGGGACTTCCATCGAACAACGGCCAACAACTGTTAATCAACGGTTAGCTTTTGGTCATTGGGAAGTAGATACGGTGCTTTCTAGTCGAggtgag > 2:1044136‑M2/1‑130 (MQ=255) ccaccaGCACCGAGTGAGCGAAAATCGTGGGAAATTTACAAGTGGGACTTCCATCGAACAACGGCCAACAACTGTTAATCAACGGTTAGCTTTTGGTCATTGGGAAGTAGATACGGTGCTTTCTAGTCGAggtga > 2:594254‑M2/1‑130 (MQ=255) ccGCCAGCACCGAGTGAGCGAAAATCGTGGGAAATTTACAAGTGGGACTTCCATCGAACAACGGCCAACAACTGTTAATCAACGGTTAGCTTTTGGTCATTGGGAAGTAGATACGGTGCTTTCTAGTCGAagtgag > 1:1799230‑M2/1‑130 (MQ=255) cAGCACCGAGTGAGCGAAAATCGTGGGAAATTTACACGTGGGACTTCCATCGAACAACGGCCAACAACTGTTAATCAACGGTTAGCTTTTGGTCATTGGGAAGTAGATACGGTGCTTTCTAGTCGAggtgagtcac > 1:959055‑M2/1‑126 (MQ=255) cAGCACCGAGTGAGCGAAAATCGTGGGAAATTTACAAGTGGGACTTCCATCGAACAACGGCCAACAACTGTTAATCAACGGTTAGCTTTTGGTCATTGGGAAGTAGATACGGTGCTTTCTAGTCGAggtgagtcac < 1:443115‑M2/136‑11 (MQ=255) cAGCACCGAGTGAGCGAAAATCGTGGGAAATTTACAAGTGGGACTTCCATCGAACAACGGCCAACAACTGTTAATCAACGGTTAGCTTTTGGTCATTGGGAAGTAGATACGGTGCTTTCTAGTCGAggtgagtcac < 1:1239825‑M2/136‑11 (MQ=255) aCCGAGTGAGCGAAAATCGTGGGAAATTTACAAGTGGGACTTCCATCGAACAACGGCCAACAACTGTTAATCAACGGTTAGCTTTTGGTCATTGGGAAGTAGATACGGTGCTTTCTAGTCGAggtgagtcacgat > 2:1642958‑M2/1‑122 (MQ=255) ccGAGTGAGCGAAAATCGTGGGAAATTTACAAGTGGGACTTCCATCGAACAACGGCCAACAACTGTTAATCAACGGTTAGCTTTTGGTCATTGGGAAGTAGATACGGTGCTTTCTAGTCGAggtgagtcacgatca > 2:2384319‑M2/1‑121 (MQ=255) ccGAGTGAGCGAAAATCGTGGGAAATTTACAAGTGGGACTTCCATCGAACAACGGCCAACAACTGTTAATCAACGGTTAGCTTTTGGTCATTGGGAAGTAGATACGGTGCTTTCTAGTCGAagtgagtcacgatca > 2:857776‑M2/1‑121 (MQ=255) ccGAGTGAGCGAAAATCGTGGGAAATTTACAAGTGGGACTTCCATCGAACAACGGCCAACAACTGTTAATCAACGGTTAGCTTTTGGTCATTGGGAAGTAGATACGGTGCTTTCTAGTCGAagtgagtcacgatca > 2:245222‑M2/1‑121 (MQ=255) ccGAGTGAGCGAAAATCGTGGGAAATTTACAAGTGGGACTTCCATCGAACAACGGCCAACAACTGATAATCAACGGTTAGCTTTTGGTCATTGGGAAGTAGATACGGTGCTTTCTAGTCGAggtgagtcacgatca > 1:831244‑M2/1‑121 (MQ=255) gAGCGAAAATCGTGGGAAATTTACAAGTGGGACTTCCATCGAACAACGGCCAACAACTGTTAATCAACGGTTAGCTTTTGGTCATTGGGAAGTAGATACGGTGCTTTCTAGTCGAggtgagtcacgatcatgtctg < 1:403698‑M2/136‑22 (MQ=255) gAGCGAAAATCGTGGGAAATTTACAAGTGGGACTTCCATCGAACAACGGCCAACAACTGTTAATCAACGGTTAGCTTTTGGTCATTGGGAAGTAGATACGGTGCTTTCTAGTCGAggtgagtcacgatcatgtctg < 1:307042‑M2/136‑22 (MQ=255) gAGCGAAAATCGTGGGAAATTTACAAGTGGGACTTCCATCGAACAACGGCCAACAACTGTTAATCAACGGTTAGCTTTTGGTCATTGGGAAGTAGATACGGTGCTTTCTAGTCGAggtgagtcacgatca > 2:549715‑M2/1‑115 (MQ=255) gAGCGAAAATCGTGGGAAATTTACAAGTGGGACTTCCATCGAACAACGGCCAACAACTGTTAATCAACGGTTAGCTTTTGGTCATTGGGAAGTAGATACGGTGCTTTCTAGTCGAagtgagtcacgatcatgtctg < 2:1634803‑M2/136‑22 (MQ=255) gAGCGAAAATCGTGGGAAATTTACAAGTGGGACTTCCATCGAACAACGGCCAACAACTGTTAATCAACGGTTAGCTTTTGGTCATTGGGAAGTAGATACGGTGCTTTCTAGTCGAagtgagtcacgatcatgtctg < 2:417329‑M2/136‑22 (MQ=255) gAGCGAAAATCGTGGGAAATTTACAAGTGGGACTTCCATCGAACAACGGCCAACAACTGTTAATCAACGGTTAGCTTTTGGTCATTGGGAAGTAGATACGGTGCTTTCTAGTCGAagtgagtcacgatcatgtct > 2:1435432‑M2/1‑115 (MQ=255) gAGCGAAAATCGTGGGAAATTTACAAGTGGGACTTCCATCGAACAACGGCCAACAACTGTTAATCAACGGTTAGCTTTTGGTCATTGGGAAGTAGATACGGTGCTTTCTAGTCGAagtgagtcacgatcatgtct > 1:581585‑M2/1‑115 (MQ=255) gCGAAAATCGTGGGAAATTTACAAGTGGGACTTCCATCGAACAACGGCCAACAACTGTTAATCAACGGTTAGCTTTTGGTCATTGGGAAGTAGATACGGTGCTTTCTAGTCGAagtgagtcacgatcatgtctgg > 2:2163641‑M2/1‑113 (MQ=255) gCGAAAATCGTGGGAAATTTACAAGTGGGACTTCCATCGAACAACGGCCAACAACTGTTAATCAACGGTTAGCTTTTGGTCATTGGGAAGTAGATACGGTGCTTTCTAGTCGAagtgagtcacgatcatgtctgg > 2:294176‑M2/1‑113 (MQ=255) gAAAATCGTGTGAAATTTACAAGTGGGACTTCCATCGAACAACGGCCAACAACTGTTAATCAACGGTTAGCTTTTGGTCATTGGGAAGTAGATACGGTGCTTTCTAGTCGAggtgagtcacgatcatgtctggtt > 2:751681‑M2/1‑111 (MQ=255) gAAAATCGTGGGAAATTTACAAGTGGGACTTCCATCGAACAACGGCCAACAACTGTTAATCAACGGTTAGCTTTTGGTCATTGGGAAGTAGATACGGTGCTTTCTAGTCGAggtgagtcacgatcatgtctggtt < 1:1582353‑M2/135‑25 (MQ=255) aaaTCGTGGGAAATTTACAAGTGGGACTTCCATCGAACAACGGCCAACAACTGTTAATCAACGGTTAGCTTTTGGTCATTGGGAAGTAGATACGGTGCTTTCTAGTCGAggtgagtcacgatcatgtctggttaca < 2:2230286‑M2/136‑28 (MQ=255) aaTCGTGGGAAATTTACAAGTGGGACTTCCATCGAACAACGGCCAACAACTGTTAATCAACGGTTAGCTTTTGGTCATTGGGAAGTAGATACGGTGCTTTCTAGTCGAagtgagtcacgatcatgtctggttacat > 1:677801‑M2/1‑108 (MQ=255) cGTGGGAAATTTACAAGTGGGACTTCCATCGAACAACGGCCAACAACTGTTAATCAACGGTTAGCTTTTGGTCATTGGGAAGTAGATACGGTGCTTTCTAGTCGAagtgagtcacgatcatgtctggttacattcg > 2:965731‑M2/1‑105 (MQ=255) gAAATTTACAAGTGGGACTTCCATCGAACAACGGCCAACAACTGTTAATCAACGGTTAGCTTTTGGTCATTGGGAAGTAGATACGGTGCTTTCTAGTCGAggtgagtcacgatcatgtctggttacattcgtaga < 1:1021589‑M2/135‑36 (MQ=255) gAAATTTACAAGTGGGACTTCCATCGAACAACGGCCAACAACTGTTAATCAACGGTTAGCTTTTGGTCATTGGGAAGTAGATACGGTGCTTTCTAGTCGAagtgagtcacgatcatgtctggttacattcgtaga < 1:2388661‑M2/135‑36 (MQ=255) aaTTTACAAGTGGGACTTCCATCGAACAACGGCCAACAACTGTTAATCAACGGTTAGCTTTTGGTCATTGGGAAGTAGATACGGTGCTTTCTAGTCGAagtgagtcacgatcatgtctggttacattcgtagaacg > 2:1107456‑M2/1‑98 (MQ=255) aaGTGGGACTTCCATCGAACAACGGCCAACAACTGTTAATCAACGGTTAGCTTTTGGTCATTGGGAAGTAGATACGGTGCTTTCTAGTCGAagtgagtcacgatcatgtctggttacattcgtagaacgtaagacc > 1:1069493‑M2/1‑91 (MQ=255) aaGTGGGACTTCCATCGAACAACGGCCAACAACTGTTAATCAACGGCTAGCTTTTGGTCATTGGGAAGTAGATACGGTGCTTTCTAGTCGAggtgagtcacgatcatgtctggttacattcgtagaacgtaagacc > 1:386623‑M2/1‑91 (MQ=255) cTTCCATCGAACAACGGCCAACAACTGTTAATCAACGGTTAGCTTTTGGTCATTGGGAAGTAGATACGGTGCTTTCTAGTCGAggtgagtcacgatcatgtctggttacattcgtagaacgtaagacccgacttct < 2:1142461‑M2/136‑54 (MQ=255) ccATCGAACAACGGCCAACAACTGTTAATCAACGGTTAGCTTTTGGTCATTGGGAAGTAGATACGGTGCTTTCTAGTCGAagtgagtcacgatcatgtctggttacattcgtagaacgtaagacccgacttctatg > 2:1565725‑M2/1‑80 (MQ=255) cGAACAACGGCCAACAACTGTTAATCAACGGTTAGCTTTTGGTCATTGGGAAGTAGATACGGTGCTTTCTAGTCGAggtgagtcacgatcatgtctggttacattcgtagaacgtaagacccgacttctatgggcc < 2:920444‑M2/136‑61 (MQ=255) gAACAACGGCCAACAACTGTTAATCAACGGTTAGCTTTTGGTCATTGGGAAGTAGATACGGTGCTTTCTAGTCGAagtgagtcacgatcatgtctggttacattcgtagaacgtaagacccgacttctatgggcta > 2:393350‑M2/1‑75 (MQ=255) gAACAACGGCCAACAACTGTTAATCAACGGTTAGCTTTTGGTCATTGGGAAGTAGAGACGGTGCTTTCTAGTCGAggtgagtcacgatcatgtctggttacattcgtagaacgtaagacccgacttctatgggcca > 2:144355‑M2/1‑75 (MQ=255) aacGGCCAACAACTGTTAATCAACGGTTAGCTTTTGGTCATTGGGAAGTAGATACGGTGCTTTCTAGTCGAagtgagtcacgatcatgtctggttacattcgtagaacgtaagacccgacttctatgggctatcaa < 2:1273922‑M2/136‑66 (MQ=255) acGGCCAACAACTGTTAATCAACGGTTAGCTTTTGGTCATTGGGAAGTAGATACGGTGCTTTCTAGTCGAggtgagtcacgatcatgtctggttacattcgtagaacgtaagacccgacttctatgggccatcaaa > 2:636056‑M2/1‑70 (MQ=255) aacaacTGTTAATCAACGGTTAGCTTTTGGTCAGTGGGAAGTAGATACGGAGCTTTCTAGTCTAagagagtcacgatcatgtctggttacaatcgtagaactaaagacccgactacaatgtgctatcaaagcccct < 1:1814121‑M2/136‑73 (MQ=255) caacTGTTAATCAACGGTTAGCTTTTGGTCATTGGGAAGTAGATACGGTGCTTTCTAGTCGAggtgagtcacgatcatgtctggttacattcgtagaacgtaagacccgacttctatgggccatcaaagcccctaa > 2:2192500‑M2/1‑62 (MQ=255) aacTGTTAATCAACGGTTAGCTTTTGGTCATTGGGAAGTAGATACGGTGCTTTCTAGTCGAagtgagtcacgatcatgtctggttacattcgttgaacgttagacacgacttctatgggctatcaaagcccctaat > 2:337484‑M2/1‑61 (MQ=255) aacTGTTAATCAACGGTTAGCTTTTGGTCATTGGGAAGTAGATACGGTGCTTTCTAGTCGAagtgagtcacgatcatgtctggttacattcgtagaacgtaagacccgacttctatgggctatcaaagcccctaat > 2:494067‑M2/1‑61 (MQ=255) aacTGTTAATCAACGGTTAGCTTTTGGTCATTGGGAAGTAGATACGGTGCTTTCTAGTCGAagtgagtcacgatcatgtctggttacattcgtagaacgtaagacccgacttctatgggctatcaaagcccctaat > 2:1324836‑M2/1‑61 (MQ=255) aacTGTTAATCAACGGTTAGCTTTTGGTCATTGGGAAGTAGATACGGTGCTTTCTAGTCGAagtgagtcacgatcatgtctggttacattcgtagaacgtaagacccgacttctatgggctatcaaagcccctaat > 2:1677953‑M2/1‑61 (MQ=255) aacTGTTAATCAACGGTTAGCTTTTGGTCATTGGGAAGTAGATACGGTGCTTTCTAGTCGAagtgagtcac > 2:1913383‑M2/1‑61 (MQ=255) aaTCTACGGTTAGCTTTTGGTCTTTGGGAAGTAGATACGGTGCTTTCTAGTCGAtgtgagtcacgatcatgtctggttacattcgtagaacgtaagacccgacttctatgggctatctaagcccctaatagaacgg > 2:1814121‑M2/1‑54 (MQ=255) aaTCAACGGTTAGCTTTTGGTCATTGGGAAGTAGATACGGTGCTTTCTAGTCGAggtgagtcacgatcatgtctggttacattcgtagaacgtaagacccgacttctatgggccatcaaagcccctaaccgaactg > 1:1462321‑M2/1‑54 (MQ=255) aaTCAACGGTTAGCTTTTGGTCATTGGGAAGTAGATACGGTGCTTTCTAGTCGAggtgagtcacgatcatgtctggttacattcgtagaacgtaagacccgacttctatgggccatcaaagcccctaaccgaactg > 2:1932414‑M2/1‑54 (MQ=255) aaTCAACGGTTAGCTTTTGGTCATTGGGAAGTAGATACGGTGCTTTCTAGTCGAggtgagtcacgatcatgtctggttacattcgtagaacgtaagacccgacttctatgggccatcaaagcccctaaccgaactg > 1:1485847‑M2/1‑54 (MQ=255) aaTCAACGGTTAGCTTTTGGTCATTGGGAAGTAGATACGGTGCTTTCTAGTCGAggtgagtcacgatcatgtctggttacattcgtagaacgtaagacccgacttctatgggccatcaaagcccctaaccgaactg > 1:989952‑M2/1‑54 (MQ=255) aaTCAACGGTTAGCTTTTGGTCATTGGGAAGTAGATACGGTGCTTTCTAGTCGAggtgagtcacgatcatgtctggttacattcgtagaacgtaagacccgacttctatgggccatcaaagcccctaaccgaactg > 1:1148027‑M2/1‑54 (MQ=255) aaTCAACGGTTAGCTTTTGGTCATTGGGAAGTAGATACGGTGCTTTCTAGTCGAggtgagtcacgatcatgtctggttacattcgtagaacgtaagacccgacttctatgggccatcaaagcccctaaccgaactg > 1:2239662‑M2/1‑54 (MQ=255) aaTCAACGGTTAGCTTTTGGTCATTGGGAAGTAGATACGGTGCTTTCTAGTCGAagtgagtcacgatcatgtctggttacattcgtagaacgtaagacccgacttctatgggctatcaaagcccctaatagaacgg > 1:1525798‑M2/1‑54 (MQ=255) aaTCAACGGTTAGCTTTTGGTCATTGGGAAGTAGATACGGTGCTTTCTAGTCGAagtgagtcacgatcatgtctggttacattcgtagaacgtaagacccgacttctatgggctatcaaagcccctaatagaacgg > 2:2011289‑M2/1‑54 (MQ=255) aaTCAACGGTTAGCTTTTGGTCATTGGGAAGTAGATACGGTGCTTTCTAGTCGAagtgagtcacgatcatgtctggttacattcgtagaacgtaagacccgacttctatgggctatcaaagcccctaatagaacgg > 1:1054475‑M2/1‑54 (MQ=255) aaTCAACGGTTAGCTTTTGGTCATTGGGAAGTAGATACGGTGCTTTCTAGTCGAagtgagtcacgatcatgtctggttacattcgtagaacgtaagacccgacttctatgggctatcaaagcccctaatagaacgg > 1:2267519‑M2/1‑54 (MQ=255) aaTCAACGGTTAGCTTTGGGTCATTGGGAAGTAGATACGGTGCTTTCTAGTCGAagtgagtcacgatcatgtctggttacattcgtagaacgtaagacccgacttctatgggctatcaaagcccctaatagaacgg > 1:1356111‑M2/1‑54 (MQ=255) aTCAACGGTTAGCTTTTGGTCATTGGGAAGTAGATACGGTGCTTTCTAGTCGa > 1:2449772/1‑53 (MQ=255) cAACGGTTAGCTTTTGGTCATTGGGAAGTAGATACGGTGCTTTCTAGTCGAagtgagtcacgatcatgtctggttacattcgtagaacgtaagacccgacttctatgggctatcaaagcccctaatagaacggcta < 2:1475482‑M2/136‑86 (MQ=255) aCGGTTAGCTTTTGGTCATTGGGAAGTAGATACGGTGCTTTCTAGTCGAagtgagtcacgatcatgtctggttacattcgtagaacgtaagacccgacttctatgggctatcaaagcccctaatagaacggctaag > 1:354077‑M2/1‑49 (MQ=255) aGCTTTTGGTCATTGGGAAGTAGATACGGTGCTTTCTAGTCGAggtgagtcacgatcatgtctggttacattcgtagaacgtaagacccgacttctatgggccatcaaagcccctaaccgaactgccaaggcctta < 1:974781‑M2/136‑94 (MQ=255) tCATTGGGAAGTAGATACGGTGCTTTCTAGTCGAagtgagtcacgatcatgtctggttacattcgtagaacgtaagacccgacttctatgggctatcaaagcccctaatagaacggctaaggctctaaacaccg < 1:1629242‑M2/134‑101 (MQ=255) ttGGGAAGTAGATACGGTGCTTTCTAGTCGAggtgagtcacgatcatgtctggttacattcgtagaacgtaagacccgacttctatgggccatcaaagcccctaaccgaactgccaaggccttaaatagcgccttt > 1:141280‑M2/1‑31 (MQ=255) ttGGGAAGTAGATACGGTGCTTTCTAGTCGAagtgagtcacgatcatgtctggttacattcgtagaacgtaagacccgacttctatgggctatcaaagcccctaatagaacggctaaggctctaaacaccgccttt > 2:1710364‑M2/1‑31 (MQ=255) ttGGGAAGTAGATACGGTGCTTTCTAGTCGAagtgagtcacgatcatgtctggttacattcgtagaacgtaagacccgacttctatgggctatcaaagcccctaatagaacggctaaggctctaaacaccgccttt > 1:63141‑M2/1‑31 (MQ=255) ttGGGAAGTAGATACGGTGCTTTCTAGTCGAagtgagtcacgatcatgtctggttacattcgtagaacgtaagacccgacttctatgggctatcaaagcccctaatagaacggctaaggctctaaacaccgccttt > 1:2047991‑M2/1‑31 (MQ=255) ttGGGAAGTAGATACGGTGCTTTCTAGTCGAagtgagtcacgatcatgtctggttacattcgtagaacgtaagacccgacttctatgggctatcaaagcccctaatagaacggctaaggctctaaacaccgccttt > 2:1162540‑M2/1‑31 (MQ=255) ggAAGTAGATACGGTGCTTTCTAGTCGAggtgagtcacgatcatgtctggttacattcgtagaacgtaagacccgacttctatgggccatcaaagcccctaaccgaactgccaaggccttaaatagcgcctttgaa < 1:726633‑M2/136‑109 (MQ=255) ggAAGTAGATACGGTGCTTTCTAGTCGAggtgagtcacgatcatgtctggttacattcgtagaacgtaagacccgacttctatgggccatcaaagcccctaaccgaactgccaaggccttaaatagcgcctttgaa < 1:2325261‑M2/136‑109 (MQ=255) gAAGTAGATACGGTGCTTTCTAGTCGAggtgagtcacgatcatgtctggttacattcgtagaacgtaagacccgacttctatgggcca > 1:1167341‑M2/1‑27 (MQ=255) gAAGTAGATACGGTGCTTTCTAGTCGAagtgagtcacgatcatgtctggttacattcgtagaacgtaagacccgacttctatgggctatcaaagcccctaatagaacggctaaggctctaaacaccgcctttggca < 1:542165‑M2/136‑110 (MQ=255) tACGGTGCTTTCTAGTCGAggtgagtcacgatcatgtctggttacattcgtagaacgtaagacccgacttctatgggccatcaaagcccctaaccgaactgccaaggccttaaatagcgcctttgaaaagtttatg > 1:1949439‑M2/1‑19 (MQ=255) gCTTTCTAGTCGAggtgagtcacgatcatgtctggttacattcgtagaacgtaagacccgacttctatgggccatcaaagcccctaaccgaactgccaaggccttaaatagcgcctttgaaaagtttatgggaa < 1:1691798‑M2/134‑122 (MQ=255) gCTTTCTAGTCGAggtgagtcacgatcatgtctggttacattcgtagaacgtaagacccgacttctatgggccatcaaagcccctaaccgaactgccaaggccttaaatagcgcctttgaaaagtttatgggaa < 1:1113179‑M2/134‑122 (MQ=255) gCTTTCTAGTCGAggtgagtcacgatcatgtctggttacattcgtagaacgtaagacccgacttctatgggccatcaaagcccctaaccgaactgccaaggccttaaa < 2:1760659‑M2/108‑96 (MQ=255) gCTTTCTAGTCGAagtgagtcacgatcatgtctggttacattcgtagaacgtaagacccgacttctatgggctatcaaagcccctaatagaacggctaaggctctaaacaccgcctttggcaagtttatggggg < 2:8169‑M2/134‑122 (MQ=255) gCTTTCTAGTCGAagtgagtcacgatcatgtctggttacattcgtagaacgtaagacccgacttctatgggctatcaaagcccctaatagaacgg < 2:1864227‑M2/95‑83 (MQ=255) gCTTTCTAGTCGAagtgagtcacgatcatgtctggttacattcgtagaacgtaagacccgacttctatgggctatcaaagcccctaatagaacgg > 1:1864229‑M2/1‑13 (MQ=255) gCTTTCTAGTCGAagtgagtcacgatcatgtctggttacattcgtagaacgtaagacccgacttctat < 1:765992‑M2/68‑56 (MQ=255) gCTTTCTAGTCGAagtgagtcacgatcatgtctggttacattc > 2:136604‑M2/1‑13 (MQ=255) ttCTAGTCGAggtgagtcacgatcatgtctggttacattcgtagaacgtaagacccgacttctatgggccatcaaagcccctaaccgaactgccaaggccttaaatagcgcctttgaaaagtttatgggaaccttt < 1:1202995‑M2/136‑127 (MQ=255) ttCTAGTCGAggtgagtcacgatcatgtctggttacattcgtagaacgtaagacccgacttctatgggccatcaaagcccctaaccgaactgccaaggccttaaatagcgcctttgaaaagtttatgggaaccttt < 1:2104798‑M2/136‑127 (MQ=255) ttCTAGTCGAagtgagtcacgatcatgtctggttacattcgtagaacgtaagacccgacttctatgggctatcaaagcccctaatagaacggctaaggctctaaacaccgcctttggcaagtttatgggggccttc < 2:534762‑M2/136‑127 (MQ=255) ttCTAGTCGAagtgagtcacgatcatgtctggttacattcgtagaacgtaagacccgacttctatgggctatcaaagcccctaatagaacggctaaggctctaaacaccgcctttggcaagtttatgggggccttc < 2:1974372‑M2/136‑127 (MQ=255) ttCTAGTCGAagtgagtcacgatcatgtctggttacattcgtagaacgtaagacccgacttctatgggctatcaaagcccctaatagaacggctaaggctctaaacaccgcctttggcaagttta > 2:802054‑M2/1‑10 (MQ=255) tAGTCGAggtgagtcacgatcatgtctggttacattcgtagaacgtaagacccgacttctatgggccatcaacgcccctaaccgaactgccaaggccttaaagagcgcctttgaaaagtttatgggaacctttggt > 1:920444‑M2/1‑7 (MQ=255) aGTCGAggtgagtcacgatcatgtctggttacattcgtagaacgtaagacccgacttctatgggccatcaaagcccctaaccgaactgccaaggccttaaatagcgcctttgaaaagtttatgggaacctttggt < 1:1300490‑M2/135‑130 (MQ=255) aGTCGAggtgagtcacgatcatgtctggttacattcgtagaacgtaagacccgacttctatgggccatcaaagcccctaaccgaactgccaaggccttaaatagcgcctttgaaaagtttatgggaacctttggt < 2:268885‑M2/135‑130 (MQ=255) aGTCGAagtgagtcacgatcatgtctggttacattcgtagaacgtaagacccgacttctatgggctatcaaagcccctaatagaacggctaaggctctaaacaccgcctttggcaagtttatgggggccttcggtc > 2:2249243‑M2/1‑6 (MQ=255) aGTCGAagtgagtcacgatcatgtctggttacattcgtagaacgtaagacccgacttctatgggctatcaaagcccctaatagaacggctaaggctctaaacaccgcctttggcaagtttatgggggccttcggtc > 2:2074056‑M2/1‑6 (MQ=255) aagtgagtcacgatcatgtctggttacattcgtagaacgtaagacccgacttctatgggctatcaaagcccctaatagaacggctaaggctctaaacaccgcctttggcaagtttatgggggccttcggtccccaa < 2:1596916‑M2/136‑136 (MQ=255) aagtgagtcacgatcatgtctggttacattcgtagaacgtaagacccgacttctatgggctatcaaagcccctaatagaacggctaaggctctaaacaccgcctttggcaagtttatgggggccttcggtccccaa < 1:163772‑M2/136‑136 (MQ=255) | GAATGTCCGCCAGCACCGAGTGAGCGAAAATCGTGGGAAATTTACAAGTGGGACTTCCATCGAACAACGGCCAACAACTGTTAATCAACGGTTAGCTTTTGGTCATTGGGAAGTAGATACGGTGCTTTCTAGTCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > TrimmedAssembly_T66_contig_41/302‑437 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |