| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | TrimmedAssembly_T66_contig_18 | = 53854 | 0 (0.000) | 174 (0.660) | 73/260 | 0.1 | 100% | intergenic (+2/–) | rasttk_feature_annotation_tool=annotate_proteins_km er_v2/– | hypothetical protein/– |
| ? | TrimmedAssembly_T66_contig_37 | = 853 | 0 (0.000) | intergenic (‑310/–) | rasttk_feature_annotation_tool=annotate_proteins_km er_v2/– | Mobile element protein/– | |||||
Only 100 of 174 total aligned reads displayed.
GTAATCGTTATCCCGATGCCGACGCACAGGAGTTACGACAAGCAGTGGCCCAGCAACAGGGAATCGACCCGAATAGCATCGTTTTTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > TrimmedAssembly_T66_contig_18/53722‑53854‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTCAAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGCACCAATTTGAACTAATTCGGCCCGATTTAGAAGCAGCTCGGCAATCC < TrimmedAssembly_T66_contig_37/853‑720 GTAATCGTTATCCCGATGCCGACGCACAGGAGTTACGACAAGCAGTGGCCCAGCAACAGGGAATCGACCCGAATAGCATCGTTTTTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAG < 1:237441/135‑1 AATCGTTATCCCGATGCCGACGCACAGGAGTTACGACAAGCAGTGGCCCAGCAACAGGGAATCGACCCGAGTAGCATCGTTTTTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGAA > 2:2349877/1‑135 AATCGTTATCCCGATGCCGACGCACAGGAGTTACGACAAGCAGTGGCCCAGCAACAGGGAATCGACCCGAATAGCATCGTTTTTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGAA > 2:1743386/1‑135 AATCGTTATCCCGATGCCGACGCACAGGAGTTACGACAAGCAGTGGCCCAGCAACAGGGAATCGACCCGAATAGCATCGTTTTTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGAA > 1:1258067/1‑135 AATCGTTATCCCGATGCCGACGCACAGGAGTTACGACAAGCAGTGGCCCAGCAACAGGGAATCGACCCGAATAGCATCGTTTTTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGA < 1:1910227/134‑1 CGTTATCCCGATGCCGACGCACAGGAGTTACGACAAGCAGTGGCCCAGCAACAGGGAATCGACCCGAATAGCATCGTTTTTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTG < 1:856149/136‑1 GTTATCCCGATGCCGACGCACAGGAGTTACGACAAGCAGTGGCCCAGCAACAGGGAATCGACCCGAATAGCATCGTTTTTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGT > 1:1670066/1‑136 TTATCCCGATGCCGACGCACAGGAGTTACGACAAGCAGTGGCCCAGCAACAGGGAATCGACCCGAATAGCATCGTTTTTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTT > 1:2035269/1‑136 TATCCCGATGCCGACGCACAGGAGTTACGACAAGCAGTGGCCCAGCAACAGGGAATCGACCCGAATAGCATCGTTTTTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTT > 1:1525595/1‑136 CCGATGCCGACGCACAGGAGTTACGACAAGCAGTGGCCCAGCAACAGGGAATCGACCCGAATAGCATCGTTTTTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAA > 1:1410504/1‑136 CCGATGCCGACGCACAGGAGTTACGACAAGCAGTGGCCCAGCAACAGGGAATCGACCCGAATAGCATCGTTTTTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAA > 2:2467655/1‑136 CCGATGCCGACGCACAGGAGTTACGACAAGCAGTGGCCCAGCAACAGGGAATCGACCCGAATAGCATCGTTTTTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAA > 2:2130704/1‑136 CCGATGCCGACGCACAGGAGTTACGACAAGCAGTGGCCCAGCAACAGGGAATCGACCCGAATAGCATCGTTTTTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAA > 2:1859506/1‑136 CCGATGCCGACGCACAGGAGTTACGACAAGCAGTGGCCCAGCAACAGGGAATCGACCCGAATAGCATCGTTTTTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTGAGAACCTGTTTAAAA > 2:1026782/1‑136 CGATGCCGACGCACAGGAGTTACGACAAGCAGTGGCCCAGCAACAGGGAATCGACCCGAATAGCATCGTTTTTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAAT < 2:1085359/136‑1 CCGACGCACAGGAGTTACGACAAGCAGTGGCCCAGCAACAGGGAATCGACCCGAATAGCATCGTTTTTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGG > 2:770175/1‑135 CCGACGCACAGGAGTTACGACAAGCAGTGGCCCAGCAACAGGGAATCGACCCGAATAGCATCGTTTTTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGG > 2:1045820/1‑135 CGACGCACAGGAGTTACGACAAGCAGTGGCCCAGCAACAGGGAATCGACCCGAATAGCATCGTTTTTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGA < 2:155804/135‑1 TACGACAAGCAGTGGCCCAGCAACAGGGAATCGACCCGAATAGCATCGTTTTTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATA < 2:538565/136‑1 CGACAAGCAGTGGCCCAGCAACAGGGAATCGACCCGAATAGCATCGTTTTTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGT > 2:619885/1‑136 ACAAGCAGTGGCCCAGCAACAGGGAATCGACCCGAATAGCATCGTTTTTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTC > 1:692025/1‑136 CAAGCAGTGGCCCAGCAACAGGGAATCGACCCGAATAGCATCGTTTTTAGTGTAGGTATTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTC < 2:1541044/135‑1 AAGCAGTGGCCCAGCAACAGGGAATCGACCCGAATAGCATCGTTTTTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTCAA < 1:1549073/136‑1 AGCAGTGGCCCAGCAACAGGGAATCGACCCGAATAGCATCGTTTTTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTCAAA < 1:1567379/136‑1 CCCAGCAACAGGGAATCGACCCGAATAGCATCGTTTTTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTCAAAAAAAGGAT > 2:1959380/1‑136 CCAGCAACAGGGAATCGACCCGAATAGCATCGTTTTTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTCAAAAAAAGGAT < 1:563515/135‑1 CCAGCAACAGGGAATCGACCCGAATAGCATCGTTTTTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTCAAAAAAAGGAT < 1:2169773/135‑1 CCAGCAACAGGGAATCGACCCGAATAGCATCGTTTTTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTCAAAAAAAGGAT < 1:2182837/135‑1 AACAGGGAATCGACCCGAGTAGCATCGTTTTTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTCAAAAAAAGGATGATAAC < 1:2349877/136‑1 AACAGGGAATCGACCCGAATAGCATCGTTTTTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTCAAAAAAAGGATGATAAC < 1:968002/136‑1 AACAGGGAATCGACCCGAATAGCATCGTTTTTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTCAAAAAAAGGATGATAAC < 1:2534636/136‑1 AACAGGGAATCGACCCGAATAGCATCGTTTTTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTCAAAAAAAGGATGATAAC < 2:1377536/136‑1 AACAGGGAATCGACCCGAATAGCATCGTTTTTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTCAAAAAAAGGATGAT < 1:625043/133‑1 CAGGGAATCGACCCGAATAGCATCGTTTTTAGTGTAGGTCTTGATGAGATGATCGTGATGATATCACGGACGTTCTTAGTACATGTTTAAAATCTGGACAATTTGAGATGATAGTTCAAAAAAAGGATGATAACTT > 2:2074394/1‑136 GAATCGACCCGAATAGCATCGTTTTTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTCAAAAAAAGGATGATAACTTATGA > 2:1272337/1‑136 GAATCGACCCGAATAGCATCGTTTTTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTCAAAAAAAGGATGATAACTTATG < 2:692025/135‑1 GAATCGACCCGAATAGCATCGTTTTTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTCAAAAAAAGGATGATAACTTAT < 2:876827/134‑1 GAATCGACCCGAATAGCATCGTTTTTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTCAAAAAAAGGATGATAACTTA < 1:1366556/133‑1 ACCCGAATAGCATCGTTTTTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTCAAAAAAAGGATGATAACTTATGAACTAC > 2:433003/1‑135 ACCCGAATAGCATCGTTTTTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTCAAAAAAAGGAT < 2:1386519/118‑1 CCCGAATAGCATCGTTTTTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTCAAAAAAAGGATGATAACTTATGAACTACCC < 1:2151760/136‑1 CCCGAATAGCATCGTTTTTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTCAAAAAAAGGATGATAACTTATGAACTACCC < 1:1045820/136‑1 CCCGAATAGCATCGTTTTTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGGTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGGTCAAAAAAAGGATGAGAACTTATGTACTACC > 2:1112026/1‑135 CCGAATAGCATCGTTTTTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTCAAAAAAAGGATGATAACTTATGAACTACCCC < 1:2242798/136‑1 GAATAGCATCGTTTTTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTCAAAAAAAGGATGATAACTTATGAACTACCCCAG < 2:2068581/136‑1 AGCATCGTTTTTAGTGAAGGTCTTGATGAGATGATCTTGATGTAAAAACGGACGTTCATATAAACTGTTTAAAATCTGGACAATTTGATATGATAGTTCAAAAAAAGGATGATAACTTATGAACTACCCCAGCAA > 2:1756205/1‑135 CGTTTTTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTGAAAAATTGGATGATAAGTTATGAACTACCCCAGCAATCCCTC > 2:2325688/1‑136 CGTTTTTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTCAAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTC > 2:2536629/1‑136 CGTTTTTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTCAAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTC > 1:1767004/1‑136 TTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTCAAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGC > 2:1223015/1‑136 GTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTCAAAAAAAGGATGATAACTTATGAACTACCCCTGCAATCCCTCACGGCACCAATTTG > 1:310653/1‑136 TCTTGATGAGATGATAGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTCAAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGCACCAATTT < 2:125550/134‑1 CTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTCAAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGCACCAATTTGA > 1:597744/1‑135 TGAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTCAAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGCACCAATTTGAACTAAT > 1:245227/1‑136 GAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTCAAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGCACCAATTTGAACTAATT < 1:893094/136‑1 GAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTCAAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGCACCAATTTGAACTAAT > 1:13435/1‑135 GAGATGATCGTGATGTTATCACGGACGTTCTTAGAACATGTTTAAAATCTGGACAATTTGATATGATAGTTCATAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGCACCAATTTGAACTCAT > 2:2010316/1‑135 TGATCGTGATGTTATCACGGACGTTCTTAGACCCTGTTTAAAATCTGGACAATTTGATATGATAGTTCAAAAAAAGGATGATAACTTATGAACTACCCCCGCAATCCCTCACGGCACCACTTTGAACTAATTCG < 2:803928/134‑1 TGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTCAAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGCACCAATTTGAACTAATTCGG < 1:937442/135‑1 TGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTCAAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGCACCAATTTGAACTAATTCGG < 1:483407/135‑1 TGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTCAAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGCACCAATTTGAACTAATTCG < 1:2023467/134‑1 ATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTCAAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGCACCAATTTGAACTAATTCGGCCC > 1:1021480/1‑136 ATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTCAAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGCACCAATTTGAACTAATTCGGCCC > 2:1269299/1‑136 ATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTCAAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGCACCAATTTGAACTAATTCGGCCC > 1:1021458/1‑136 ATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTCAAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGCACCAATTTGAACTAATTCGGCCC > 1:764872/1‑136 ATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTCAAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGCACCAATTTGAACTAATTCGGCCC > 1:1592301/1‑136 ATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTCAAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGCACCAATTTGAACTAATTCGGCCC > 1:2430037/1‑136 ATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTCAAAAAAAGGATGATAACTTATGAAC < 2:1039249/91‑1 ATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAA > 1:2297740/1‑39 GATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTCAAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGCACCAATTTGAACTAATTCGGCCCGATTT > 1:330599/1‑136 TGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTCAAAAAAAGGATGATAACTTATGAACGACCCCAGCAATCCCTCACGGCACCAATTTGAACTAATTCGGCCCGATTTAG < 2:82075/136‑1 TATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTCAAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGCACCAATTTGAACTAATTCGGCCCGATTTAGAAG < 1:1956499/136‑1 TATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTCAAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGCACCAATTTGAACTAATTCGGCCCGATTTAGAA > 1:1050396/1‑135 TCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTCAAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGCACCAATTTGAACTAATTCGGCCCGATTTAGAAGCA < 2:945664/136‑1 ACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTCAAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGCACCAATTTGAACTAATTCGGCCCGATTTAGAAGCA > 2:1150802/1‑134 ACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTCAAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGCACCAATTTGAACTAATTCGGCCCGATTTAGAAGCA > 1:1326710/1‑134 ACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTCAAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGCACCAATTTGAACTAATTCGGCCCGATTTAGAAGCA > 2:512925/1‑134 ACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTCAAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGCACCAATTTGAACTAATTCGGCCCGATTTAGAAGCA > 2:2286198/1‑134 ACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTCAAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGCACCAATTTGAACTAATTCGGCCCGATTTAGAAGCA > 1:665322/1‑134 ACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTCAAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCC > 2:149328/1‑92 ACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTCAAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCC < 1:149328/92‑1 CGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTCAAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGCACCAATTTGAACTAATTCGGCCCGATTTAGAAGCAGCT < 1:531467/136‑1 CGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTCAAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGCACCAATTTGAACTAATTCGGCCCGATTTAGAAGCAGCT < 1:121557/136‑1 ACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTCAAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGCACCAATTTGAACTAATTCGGCCCGATTTAGTAGCAGCTCG < 2:1126361/135‑1 ACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTCAAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGCACCAATTTGAACTAATTCGGCCCGATTTAGAAGCAGCTCG < 1:2286198/135‑1 ACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTCAAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGCACCAATTTGAACTAATTCGGCCCGATTTAGAAGCAGCTCG < 2:1383608/135‑1 ACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTCAAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGCACCAATTTGAACTAATTCGGCCCGATTTAGAAGCAGCTCG < 1:1169753/135‑1 ACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTCAAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGCACCAATTTGAACTAATTCGGCCCGATTTAGAAGCAGCTCG < 2:1021458/135‑1 ACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTCAAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGCACCAATTTGAACTAATTCGGCCCGATTTAGAAGCAGCTCG < 2:25774/135‑1 ACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTCAAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGCACCAATTTGAACTAATTCGGCCCGATTTAGAAGCAGCTCG < 2:2523432/135‑1 ACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTCAAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGCACCAATTTGAACTAATTCGGCCCGATTTAGAAGCAGCTCG < 1:1859506/135‑1 ACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGAGATGATAGTTCAAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGCACCACTTTGACCTAATTCGGCCCGATTTAGAAGCAGCTCG < 1:1026782/135‑1 CGTTCTTAGAACCTTTTTAAAATCTGGACAATTTGATATGATAGTTCAAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGCACCAATTTGAACTAATTCGGCCCGATTTAGAAGCAGCTCGGC > 1:2510657/1‑136 GTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTCAAAAAAAGGAT > 2:159538/1‑57 GTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTCAAAAAAAGGAT < 1:159538/57‑1 TCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTCAAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGCACCAATTTGAACTAATTCGGCCCGATTTAGAAGCAGCTCGGCAA > 2:617380/1‑135 TCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTCAAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGCACCAATTTGAACTAATTCGGCCCGATTTAGAAGCAGCTCGGCAA > 2:1363379/1‑135 TCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTCAAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGCACCAATTTGAACTAATTCGGCCCGATTTAG > 2:2136311/1‑121 TCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTCAAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGCACCAATTTGAACTAATTCGGCCCGATTTAG < 1:2136311/121‑1 TTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTCAAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGCACCAATTTGAACTAATTCGGCCCGATTTAGAAGCAGCTCGGCAATCC < 2:1670066/136‑1 GTAATCGTTATCCCGATGCCGACGCACAGGAGTTACGACAAGCAGTGGCCCAGCAACAGGGAATCGACCCGAATAGCATCGTTTTTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > TrimmedAssembly_T66_contig_18/53722‑53854‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTCAAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGCACCAATTTGAACTAATTCGGCCCGATTTAGAAGCAGCTCGGCAATCC < TrimmedAssembly_T66_contig_37/853‑720 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |