| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | TrimmedAssembly_T66_contig_3 | = 176241 | 251 (0.980) | 134 (0.560) +CAGCAGAACT |
66/240 | 0.5 | 35.9% | coding (374/804 nt) | rasttk_feature_annotation_tool=annotate_proteins_km er_v2 | hypothetical protein |
| ? | TrimmedAssembly_T66_contig_3 | 176327 = | 268 (1.040) | coding (288/804 nt) | rasttk_feature_annotation_tool=annotate_proteins_km er_v2 | hypothetical protein | |||||
Only 100 of 161 total aligned reads displayed.
AGCACTTGATGAAGCTTGACTAGTGGTTGCAGCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > TrimmedAssembly_T66_contig_3/176108‑176241‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACTTCAAGCTTATCACCAATGAAGATTAAGTTAACATTAGCTAACTTGTTTGCCTTTTC > TrimmedAssembly_T66_contig_3/176327‑176461 |||||||||| AGCACTTGATGAAGCTTGACTAGTGGTTGCAGCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCA < 2:1215231/136‑1AGCACTTGATGAAGCTTGACTAGTGGTTGCAGCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCA < 2:273037/136‑1AGCACTTGATGAAGCTTGACTAGTGGTTGCAGCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGC < 2:1873775/135‑1 GCACTTGATGAAGCTTGACTAGTGGTTGCAGCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCA > 1:818215/1‑135 GATGAAGCTTGACTAGTGGTTGCAGCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGA > 2:2028426/1‑134 ATGAAGCTTGACTAGTGGTTGCAGCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACT > 2:1429978/1‑136 ATGAAGCTTGACTAGTGGTTGCAGCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACT > 2:25210/1‑136 ATGAAGCTTGACTAGTGGTTGCAGCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAG < 2:1956878/132‑1 ATGAAGCTTGACTAGTGGTTGCAGCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAG > 1:1956878/1‑132 TGAAGCTTGACTAGTGGTTGCAGCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTA > 1:449207/1‑136 GAAGCTTGACTAGTGGTTGCAGCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAG > 1:1504526/1‑136 AAGCTTGACTAGTGGTTGCAGCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGT > 2:488045/1‑136 AAGCTTGACTAGTGGTTGCAGCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGT > 2:2408334/1‑136 AGCTTGACTAGTGGTTGCAGCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTA < 1:1305570/136‑1 TTGACTAGTGGTTGCAGCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGC < 1:2028426/135‑1 AGTGGTTGCAGCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTA > 1:1886393/1‑136 GGTTGCAGCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTT < 1:1368400/136‑1 GGTTGCAGCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTT < 2:651174/136‑1 GGTTGCAGCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTT < 2:1243601/136‑1 GTTGCAGCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTT > 1:2071494/1‑135 TTGCAGCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTT > 1:1071382/1‑134 TTGCAGCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTT > 1:319284/1‑134 TTGCAGCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTT > 2:823879/1‑134 TTGCAGCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTT > 2:1200622/1‑134 TTGCAGCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTT > 2:670744/1‑134 TTGCAGCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGC > 2:1370664/1‑109 GCAGCAGTACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTG < 1:2341572/136‑1 AGCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGAT > 1:2186192/1‑136 AGCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGA < 2:1423947/135‑1 AGCAGAACTTGAAGATTGGCTAGCAGCTGATAGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGA < 1:2334087/135‑1 ACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGT < 2:449207/136‑1 ACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGT < 1:823323/136‑1 ACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGG < 1:2266899/135‑1 ACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTG < 1:1539471/134‑1 TTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGC > 2:191110/1‑136 TGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCA < 1:491220/136‑1 GAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCA > 1:1944474/1‑135 AGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGC < 2:2227293/135‑1 GCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGC > 1:2268500/1‑134 GCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGC > 2:1472387/1‑134 GCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCAGATTGTGGTGCAGC > 2:750861/1‑134 TTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCAC < 2:1882976/134‑1 CTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTA > 2:1960290/1‑135 CTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTA > 1:1050931/1‑135 TAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGC > 1:2038292/1‑136 CTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGA > 2:1972712/1‑136 TGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGA < 2:1713167/135‑1 TGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCG > 2:1677340/1‑136 TGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCG > 1:2534749/1‑136 TGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTT > 2:1558710/1‑136 TGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGT < 1:1654104/135‑1 GAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTG < 1:965169/136‑1 GCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGT < 1:85299/135‑1 GCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGT < 1:398637/135‑1 GCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGGAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGT < 1:2466322/135‑1 TTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTG < 1:2510973/135‑1 TTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTG < 1:53138/135‑1 TGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTA < 1:1472387/136‑1 GAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAG > 2:1005530/1‑136 GAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAG > 1:2197285/1‑136 GAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAG > 1:1906440/1‑136 GAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAG > 2:150901/1‑136 GAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTC < 1:2539634/120‑1 AGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGACGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCA > 2:343988/1‑136 AGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCA > 1:1612466/1‑136 AGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTAC < 1:670744/134‑1 AGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTAC < 2:1735572/134‑1 ACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACT < 1:1833742/136‑1 ACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGAC < 2:1650609/135‑1 CTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGT > 1:1700639/1‑110 GCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACTTCAAGCT > 1:1511526/1‑136 GCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACTTCAAGCT > 1:946425/1‑136 GCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACTTCAAGCT > 1:946498/1‑136 AACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACTTCAAGCTTA > 2:1249489/1‑136 AACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACTTCAAGCTTA > 2:771891/1‑136 AACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACGAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACTTCAAGCTTA > 2:850999/1‑136 ACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACTTCAAGCTTAT < 1:587717/136‑1 TTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACTTCAAGCTTATCACC < 2:818215/136‑1 TGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTGGTTGTAGTAGTACCATTGACTTCAAGCTTATCACCA > 2:232791/1‑136 AAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACTTCAAGCTTATCACCAAT > 2:597804/1‑136 GTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACTTCAAGCTTATCACCAATGA > 1:1993283/1‑136 GTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACTTCAAGCTTATCACCAATGA > 1:2447950/1‑136 GTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACTTCAAGCTTATCACCAATGA > 2:517301/1‑136 AGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACTTCAAGCTTATCACCAATGAA < 1:2408334/135‑1 AGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACTTCAAGCTTATCACCAATGAA < 2:1494066/135‑1 AGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACTTCAAGCTTATCACCAATGAA < 1:488045/135‑1 TGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACTTCAAGCTTATCACCAATGAAGATTA < 1:2371890/136‑1 TGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACTTCAAGCTTATCACCAATGAAGATTA < 1:1583937/136‑1 GGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACTTCAAGCTTATCACCAATGAAGATTAA > 2:262477/1‑136 GGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACTTCAAGCTTATCACCAATGAAGATTAA > 2:2183255/1‑136 GGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACTTCAAGCTTATCACCAATGAAGATTAA > 1:1463237/1‑136 GGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACTTCAAGCTTATCACCAATGAAGATTAA > 1:13719/1‑136 AGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCATTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACTTCAAGCTTATCACCAATGAAGATTAAGTTAA < 2:2071494/134‑1 GAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACTTCAAGCTTATCACCAATGAAGATTAAGTTAACATTAGCTA > 1:702452/1‑136 GAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACTTCAAGCTTATCACCAATGAAGATTAAGTTAACATTAGCTA > 2:766330/1‑136 AGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACTTCAAGCTTATCACCAATGAAGATTAAGTTAACATTAGCTAACTTGTTT > 1:391367/1‑136 AGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACTTCAAGCTTATCACCAATGAAGATTAAGTTAACATTAGCTAACTTGTTT > 1:236884/1‑136 ACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACTTCAAGCTTATCACCAATGAAGATTAAGTTAACATTAGCTAACTTGTTTGCCTTT < 1:728702/136‑1 CTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACTTCAAGCTTATCACCAATGAAGATTAAGTTAACATTAGCTAACTTGTTTGCCTTTT < 2:1072695/136‑1 TAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCTCTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACTTCAAGCTTATCACCAATGAAGATTAAGTTAACATTAGCTAACTTGTTTGCCTTTTC > 2:508543/1‑136 |||||||||| AGCACTTGATGAAGCTTGACTAGTGGTTGCAGCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > TrimmedAssembly_T66_contig_3/176108‑176241‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACTTCAAGCTTATCACCAATGAAGATTAAGTTAACATTAGCTAACTTGTTTGCCTTTTC > TrimmedAssembly_T66_contig_3/176327‑176461 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |