| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | TrimmedAssembly_T66_contig_3 | = 176241 | 251 (0.980) | 134 (0.560) +CAGCAGAACT |
66/240 | 0.5 | 35.9% | coding (374/804 nt) | rasttk_feature_annotation_tool=annotate_proteins_km er_v2 | hypothetical protein |
| ? | TrimmedAssembly_T66_contig_3 | 176327 = | 268 (1.040) | coding (288/804 nt) | rasttk_feature_annotation_tool=annotate_proteins_km er_v2 | hypothetical protein | |||||
Only 100 of 410 total aligned reads displayed.
CACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGTAGCAGAACTAGTAGCTTGGCTAGCAACTGATTGTGAAGAAGCACTAGTAGCACTGGCACTCGTTGCAGTTGAAGCAGCTGAAGAAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACTTCAAGCTTATCACCAATGAAGATTAAGTTAACATTAGCTAACTTGTTTGCCTTTTC > TrimmedAssembly_T66_contig_3/176194‑176461 | aagcttgactagtggttgcagcagaacttgaagcttggctagcagctgattgcgttgagcttgctgaagaagcagcactcgttgcaacacttgaagtagcttggctagcagctgaagaagtagcagcagaactagt > 2:488045‑M2/134‑136 (MQ=255) agcttgactagtggttgcagcagaacttgaagcttggctagcagctgattgcgttgagcttgctgaagaagcagcactcgttgcaacacttgaagtagcttggctagcagctgaagaagtagcagcagaactagta < 1:1305570‑M2/4‑1 (MQ=255) agcttgactagtggttgcagcagaacttgaagcttggctagcagctgattgcgttgagcttgctgaagaagcagcactcgttgcaacacttgaagtagcttggctagcagctgaagaagtagcagcagaactagt < 1:435323‑M2/3‑1 (MQ=255) ttgactagtggttgcagcagaacttgaagcttggctagcagctgattgcgttgagcttgctgaagaagcagcactcgttgcaacacttgaagtagcttggctagcagctgaagaagtagcagcagaactAGTAGc < 1:2028426‑M2/6‑1 (MQ=255) tgactagtggtagcagcagaacttgaagcttggctagcagctgattgcgttgagcttgctgaagaagcagcactcgttgcaacacttgaagtagcttggctagcagctgaagaagtagcagcagaactAGTAGCtt < 1:2465914‑M2/8‑1 (MQ=255) gCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGTAGCAGAACTAGTAGCTTGGCTAGCAACTGATTGTGAAGAAGCACTAGTAGCACTGGCACTCGTTGCAGTTGAAGCAGCTGAAGAAGTAGCTTg > 2:2111981/1‑134 (MQ=255) ggttgcagcagaacttgaagcttggctagcagctgattgcgttgagcttgctgaagaagcagcactcgttgcaacacttgaagtagcttggctagcagctgaagaagtagcagcagaactAGTAGCTTGGCTAGtt < 1:1368400‑M2/16‑1 (MQ=255) acTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGTAGCAGAACTAGTAGCTTGGCTAGCAACTGATTGTGAAGAAGCACTAGTAGCACTGGCACTCGTTGCAGTTGAAGCAGCTGAAGAAGTAGCTTGGCTAGtt > 2:355863/1‑136 (MQ=255) ttgcagcagaacttgaagcttggctagcagctgattgcgttgagcttgctgaagaagcagcactcgttgcaacacttgaagtagcttggctagcagctgaagaagtagcagcagaactAGTAGCTTGGCTAGtt > 1:460750‑M2/119‑134 (MQ=255) ttgcagcagaacttgaagcttggctagcagctgattgcgttgagcttgctgaagaagcagcactcgttgcaacacttgaagtagcttggctagcagctgaagaagtagcagcagaactAGTAGCTTGGCTAGtt > 2:1200622‑M2/119‑134 (MQ=255) ttgcagcagaacttgaagcttggctagcagctgattgcgttgagcttgctgaagaagcagcactcgttgcaacacttgaagtagcttggctagcagctgaagaagtagcagcagaactAGTAGCTTGGCTAGtt > 2:823879‑M2/119‑134 (MQ=255) agcagaacttgaagcttggctagcagctgattgcgttgagcttgctgaagaagcagcactcgttgcaacacttgaagtagcttggctagcagctgaagaagtagcagcagaactAGTAGCTTGGCTAGTTGCTGa < 1:67192‑M2/21‑1 (MQ=255) agcagaacttgaagcttggctagcagctgattgcgttgagcttgctgaagaagcagcactcgttgcaacacttgaagtagcttggctagcagctgaagaagtagcagcagaactAGTAGCTTGGCTAGTTGCTGa < 2:1423947‑M2/21‑1 (MQ=255) agcagaacttgaagcttggctagcagctgattgcgttgagcttgctgaagaagcagcactcgttgcaacacttgaagtagcttggctagcagctgaagaagtagcagcagaactAGTAGCTTGGCTAGTTGCTGa < 1:1965151‑M2/21‑1 (MQ=255) agcagaacttgaagattggctagcagctgatagcgttgagcttgctgaagaagcagcactcgttgcaacacttgaagtagcttggctagcagctgaagaagtagcagcagaactAGTAGCTTGGCTAGTTGCTGa < 1:2334087‑M2/21‑1 (MQ=255) aGTAGCTTGGCTAGCAGCTGAAGAAGTAGTAGCAGAACTAGTAGCTTGGCTAGCAACTGATTGTGAAGAAGCACTAGTAGCACTGGCACTCGTTGCAGTTGAAGCAGCTGAAGAAGTAGCTTGGCTAGTTGCTGa < 2:662848/135‑1 (MQ=255) aGTAGCTTGGCTAGCAGCTGAAGAAGTAGTAGCAGAACTAGTAGCTTGGCTAGCAACTGATTGTGAAGAAGCACTAGTAGCACTGGCACTCGGTGCAGTTGAAGCAGCTGAAGAAGTAGCTTGGCTAGTTGCTGa < 2:1468054/135‑1 (MQ=255) gTAGCTTGGCTAGCAGCTGAAGAAGTAGTAGCAGAACTAGTAGCTTGGCTAGCAACTGATTGTGAAGAAGCACTAGTAGCACTGGCACTCGTTGCAGTTGAAGCAGCTGAAGAAGTAGCTTGGCTAGTTGCTGAtt > 1:2483962/1‑136 (MQ=255) gTAGCTTGGCTAGCAGCTGAAGAAGTAGTAGCAGAACTAGTAGCTTGGCTAGCAACTGATTGTGAAGAAGCACTAGTAGCACTGGCACTCGTTGCAGTTGAAGCAGCTGAAGAAGTAGCTTGGCTAGTTGCTGAtt > 2:849097/1‑136 (MQ=255) gTAGCTTGGCTAGCAGCTGAAGAAGTAGTAGCAGAACTAGTAGCTTGGCTAGCAACTGATTGTGAAGAAGCACTAGTAGCACTGGCACTCGTTGCAGTTGAAGCAGCTGAAGAAGTAGCTTGGCTAGTTGCTGAtt > 2:2279688/1‑136 (MQ=255) gTAGCTTGGCTAGCAGCTGAAGAAGTAGTAGCAGAACTAGTAGCTTGGCTAGCAACTGATTGTGAAGAAGCACTAGTAGCACTGGCACTCGTTGCAGTTGAAGCAGCTGAAGAAGTAGCTTGGCTAGTTGCTGAtt > 1:340609/1‑136 (MQ=255) gTAGCTTGGCTAGCAGCTGAAGAAGTAGTAGCAGAACTAGTAGCTTGGCTAGCAACTGATTGTGAAGAAGCACTAGTAGCACTGGCACTCGTTGCAGTTGAAGCAGCTGAAGAAGTAGCTTGGCTAGTTGCTGAtt > 2:1865308/1‑136 (MQ=255) ttGGCTAGCAGCTGAAGAAGTAGTAGCAGAACTAGTAGCTTGGCTAGCAACTGATTGTGAAGAAGCACTAGTAGCACTGGCACTCGTTGCAGTTGAAGCAGCTGAAGAAGTAGCTTGGCTAGTTGCTGATTgtggt < 2:2011801/136‑1 (MQ=255) acttgaagcttggctagcagctgattgcgttgagcttgctgaagaagcagcactcgttgcaacacttgaagtagcttggctagcagctgaagaagtagcagcagaactAGTAGCTTGGCTAGTTGCTGATTgtggt < 1:1535120‑M2/28‑1 (MQ=255) acttgaagcttggctagcagctgattgcgttgagcttgctgaagaagcagcactcgttgcaacacttgaagtagcttggctagcagctgaagaagtagcagcagaactAGTAGCTTGGCTAGTTGCTGATTgtggt < 1:823323‑M2/28‑1 (MQ=255) acttgaagcttggctagcagctgattgcgttgagcttgctgaagaagcagcactcgttgcaacacttgaagtagcttggctagcagctgaagaagtagcagcagaactAGTAGCTTGGCTAGTTGCTGATTgtgg < 1:2266899‑M2/27‑1 (MQ=255) ggCTAGCAGCTGAAGAAGTAGTAGCAGAACTAGTAGCTTGGCTAGCAACTGATTGTGAAGAAGCACTAGTAGCACTGGCACTCGTTGCAGTTGAAGCAGCTGAAGAAGTAGCTTGGCTAGTTGCTGATTGTGGTgc > 2:40291/1‑136 (MQ=255) tgaagcttggctagcagctgattgcgttgagcttgctgaagaagcagcactcgttgcaacacttgaagtagcttggctagcagctgaagaagtagcagcagaactAGTAGCTTGGCTAGTTGCTGATTGTGGTgca < 1:491220‑M2/31‑1 (MQ=255) agcagcTGAAGAAGTAGTAGCAGAACTAGTAGCTTGGCTAGCAACTGATTGTGAAGAAGCACTAGTAGCACTGGCACTCGTTGCAGTTGAAGCAGCTGAAGAAGTAGCTTGGCTAGTTGCTGATTGTGGTgcagc > 2:2239284/1‑135 (MQ=255) agcTGAAGAAGTAGTAGCAGAACTAGTAGCTTGGCTAGCAACTGATTGTGAAGAAGCACTAGTAGCACTGGCACTCGTTGCAGTTGAAGCAGCTGAAGAAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACtt > 1:69272/1‑136 (MQ=255) agcTGAAGAAGTAGTAGCAGAACTAGTAGCTTGGCTAGCAACTGATTGTGAAGAAGCACTAGTAGCACTGGCACTCGTTGCAGTTGAAGCAGCTGAAGAAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACt < 2:1809004/135‑1 (MQ=255) gcTGAAGAAGTAGTAGCAGAACTAGTAGCTTGGCTAGCAACTGATTGTGAAGAAGCACTAGTAGCACTGGCACTCGTTGCAGTTGAAGCAGCTGAAGAAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTg > 2:1095008/1‑136 (MQ=255) cTGAAGAAGTAGTAGCAGAACTAGTAGCTTGGCTAGCAACTGATTGTGAAGAAGCACTAGTAGCACTGGCACTCGTTGCAGTTGAAGCAGCTGAAGAAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGt > 2:1657984/1‑136 (MQ=255) cTGAAGAAGTAGTAGCAGAACTAGTAGCTTGGCTAGCAACTGATGGTGAAGAAGCACTAGTAGAACTGGCACTCGTTGCAGTTTAAGCAGCTGACGAAGTAGCATGGCTAGTTGCTGATTGTGGTGCAGCACTTGt > 2:930906/1‑136 (MQ=255) ctagcagctgattgcgttgagcttgctgaagaagcagcactcgttgcaacacttgaagtagcttggctagcagctgaagaagtagcagcagaactAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTa > 1:1494066‑M2/96‑135 (MQ=255) tagcagctgattgcgttgagcttgctgaagaagcagcactcgttgcaacacttgaagtagcttggctagcagctgaagaagtagcagcagaactAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTagc > 1:78813‑M2/95‑136 (MQ=255) agtagtAGCAGAACTAGTAGCTTGGCTAGCAACTGATTGTGAAGAAGCACTAGTAGCACTGGCACTCGTTGCAGTTGAAGCAGCTGAAGAAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTagcagc < 1:1907938/135‑1 (MQ=255) gtagCAGAACTAGTAGCTTGGCTAGCAACTGATTGTGAAGAAGCACTAGTAGCACTGGCACTCGTTGCAGTTGAAGCAGCTGAAGAAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAg > 1:1217336/1‑136 (MQ=255) agCAGAACTAGTAGCTTGGCTAGCAACTGATTGTGAAGAAGCACTAGTAGCACTGGCACTCGTTGCAGTTGAAGCAGCTGAAGAAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTc > 2:22224/1‑136 (MQ=255) tgcgttgagcttgctgaagaagcagcactcgttgcaacacttgaagtagcttggctagcagctgaagaagtagcagcagaactAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCg > 1:2534749‑M2/84‑136 (MQ=255) aaCTAGTAGCTTGGCTAGCAACTGATTGTGAAGAAGCACTAGTAGCACTGGCACTCGTTGCAGTTGAAGCAGCTGAAGAAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGgt > 1:170066/1‑136 (MQ=255) aCTAGTAGCTTGGCTAGCAACTGATTGTGAAGAAGCACTAGTAGCACTGGCACTCGTTGCAGTTGAAGCAGCTGAAGAAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTgg < 2:2381421/134‑1 (MQ=255) aCTAGTAGCTTGGCTAGCAACTGATTGTGAAGAAGCACTAGTAGCACTGGCACTCGTTGCAGTTGAAGCAGCTGAAGAAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGgt < 2:2494954/135‑1 (MQ=255) tagtagCTTGGCTAGCAACTGATTGTGAAGAAGCACTAGTAGCACTGGCACTCGTTGCAGTTGAAGCAGCTGAAGAAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGgttgt > 1:939613/1‑136 (MQ=255) tagtagCTTGGCTAGCAACTGATTGTGAAGAAGCACTAGTAGCACTGGCACTCGTTGCAGTTGAAGCAGCTGAAGAAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGgttgt > 1:1153264/1‑136 (MQ=255) gcttgctgaagaagcagcactcgttgcaacacttgaagtagcttggctagcagctgaagaagtagcagcagaactAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGgttgt < 1:85299‑M2/60‑1 (MQ=255) tgctgaagaagcagcactcgttgcaacacttgaagtagcttggctagcagctgaagaagtagcagcagaactAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTgta < 1:1430297‑M2/64‑1 (MQ=255) agCTTGGCTAGCAACTGATTGTGAAGAAGCACTAGTAGCACTGGCACTCGTTGCAGTTGAAGCAGCTGAAGAAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGttgttg < 2:340609/134‑1 (MQ=255) gCTTGGCTAGCAACTGATTGTGAAGAAGCACTAGTAGCACTGGCACTCGTTGCAGTTGAAGCAGCTGAAGAAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTgtag > 1:763142/1‑136 (MQ=255) gCTTGGCTAGCAACTGATTGTGAAGAAGCACTAGTAGCACTGGCACTCGTTGCAGTTGAAGCAGCTGAAGAAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTgtag > 1:1672015/1‑136 (MQ=255) gaagaagcagcactcgttgcaacacttgaagtagcttggctagcagctgaagaagtagcagcagaactAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTc > 2:2539634‑M2/69‑120 (MQ=255) gaagaagcagcactcgttgcaacacttgaagtagcttggctagcagctgaagaagtagcagcagaactAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTgtagtag > 2:150901‑M2/69‑136 (MQ=255) gCTAGCAACTGATTGTGAAGAAGCACTAGTAGCACTGGCACTCTTTGCAGTTGAAGCAGCTGAAGAAGTAGCTTGGCTAGTTGCTGAGTGTGGTGCTGCACTTGTATCAGCAGAATGCGTGGTTGTTgtagtagt > 2:680876/1‑135 (MQ=255) gCTAGCAACTGATTGTGAAGAAGCACTAGTAGCACTGGCACTCGTTGCAGTTGAAGCAGCTGAAGAAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTgtagtagt > 2:641130/1‑135 (MQ=255) tAGCAACTGATTGTGAAGAAGCACTAGTAGCACTGGCACTCGTTGCAGTTGAAGCAGCTGAAGAAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTAcc > 1:2243595/1‑136 (MQ=255) tAGCAACTGATTGTGAAGAAGCACTAGTAGCACTGGCACTCGTTGCAGTTGAAGCAGCTGAAGAAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTAcc > 2:1376418/1‑136 (MQ=255) tAGCAACTGATTGTGAAGAAGCACTAGTAGCACTGGCACTCGTTGCAGTTGAAGCAGCTGAAGAAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTAc < 2:231130/135‑1 (MQ=255) tAGCAACTGATTGTGAAGAAGCACTAGTAGCACTGGCACTCGTTGCAGTTGAAGCAGCTGAAGAAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTAc < 1:308631/135‑1 (MQ=255) tAGCAACTGATTGTGAAGAAGCACTAGTAGCACTGGCACTCGTTGCAGTTGAAGCAGCTGAAGAAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTAc < 1:1822027/135‑1 (MQ=255) tAGCAACTGATTGTGAAGAAGCACTAGTAGCACTGGCACTCGTTGCAGTTGAAGCAGCTGAAGAAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTAc < 2:1677375/135‑1 (MQ=255) aGCAACTGATTGTGAAGAAGCACTAGTAGCACTGGCACTCGTTGCAGTTGAAGCAGCTGAAGAAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCa > 1:1262296/1‑136 (MQ=255) aGCAACTGATTGTGAAGAAGCACTAGTAGCACTGGCACTCGTTGCAGTTGAAGCAGCTGAAGAAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCa > 2:2415231/1‑136 (MQ=255) aGCAACTGATTGTGAAGAAGCACTAGTAGCACTGGCACTCGTTGCAGTTGAAGCAGCTGAAGAAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCa > 1:2425356/1‑136 (MQ=255) cTGATTGTGAAGAAGCACTAGTAGCACTGGCACTCGTTGCAGTTGAAGCAGCTGAAGAAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTg > 1:613071/1‑134 (MQ=255) tGATTGTGAAGAAGCACTAGTAGCACTGGCACTCGTTGCAGTTGAAGCAGCTGAAGAAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACt < 2:1792447/136‑1 (MQ=255) tGATTGTGAAGAAGCACTAGTAGCACTGGCACTCGTTGCAGTTGAAGCAGCTGAAGAAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACt < 2:894946/136‑1 (MQ=255) gtgAAGAAGCACTAGTAGCACTGGCACTCGTTGCAGTTGAAGCAGCTGAAGAATTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACTTCaa > 2:1904011/1‑135 (MQ=255) gtgAAGAAGCACTAGTAGCACTGGCACTCGTTGCAGTTGAAGCAGCTGAAGAAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTgtag < 1:1858988/117‑1 (MQ=255) gcaacacttgaagtagcttggctagcagctgaagaagtagcagcagaactAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACTTCAAGCt > 1:946498‑M2/51‑136 (MQ=255) gcaacacttgaagtagcttggctagcagctgaagaagtagcagcagaactAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACTTCAAGCt < 1:2213984‑M2/86‑1 (MQ=255) gaagaaGCACTAGTAGCACTGGCACTCGTTGCAGTTGAAGCAGCTGAAGAAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCTGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACTTCAAGCt < 2:2348348/136‑1 (MQ=255) gaagaaGCACTAGTAGCACTGGCACTCGTTGCAGTTGAAGCAGCTGAAGAAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACTTCAAGCt > 1:2068261/1‑136 (MQ=255) agaagCACTAGTAGCACTGGCACTCGTTGCAGTTGAAGCAGCTGAAGAAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACTTCAAGCTTa > 1:997053/1‑136 (MQ=255) aacacttgaagtagcttggctagcagctgaagaagtagcagcagaactAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACTTCAAGCTTa > 2:1249489‑M2/49‑136 (MQ=255) aacacttgaagtagcttggctagcagctgaagaagtagcagcagaactAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACTTCAAGCTTa > 2:771891‑M2/49‑136 (MQ=255) gtagcttggctagcagctgaagaagtagcagcagaactAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACTTCAAGCTTATCACCAATGa > 1:1626856‑M2/39‑136 (MQ=255) gtagcttggctagcagctgaagaagtagcagcagaactAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACTTCAAGCTTATCACCAATGa > 1:1993283‑M2/39‑136 (MQ=255) gtagcttggctagcagctgaagaagtagcagcagaactAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACTTCAAGCTTATCACCAATGa > 2:517301‑M2/39‑136 (MQ=255) gtagCACTGGCACTCGTTGCAGTTGAAGCAGCTGAAGAAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACTTCAAGCTTATCACCAAGGa > 2:2056890/1‑136 (MQ=255) agcttggctagcagctgaagaagtagcagcagaactAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACTTCAAGCTTATCACCAATGaa < 1:2408334‑M2/99‑1 (MQ=255) cTGGCACTCGTTGCAGTTGAAGCAGCTGAAGAAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACTTCAAGCTTATCACCAATGAAGATTa < 1:231795/136‑1 (MQ=255) tGGCACTCGTTGCAGTTGAAGCAGCTGAAGAAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACTTCAAGCTTATCACCAATGAAGATTaa > 2:557997/1‑136 (MQ=255) ggctagcagctgaagaagtagcagcagaactAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACTTc < 2:619789‑M2/81‑1 (MQ=255) ggctagcagctgaagaagtagcagcagaactAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACTTCAAGCTTATCACCAATGAAGATTaa > 2:2183255‑M2/32‑136 (MQ=255) ggctagcagctgaagaagtagcagcagaactAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACTTCAAGCTTATCACCAATGAAGATTaa > 1:2114642‑M2/32‑136 (MQ=255) aCTCGTTGCAGTTGAAGCAGCTGAAGAAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACt > 2:75716/1‑106 (MQ=255) aCTCGTTGCAGTTGAAGCAGCTGAAGAAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACTTCAAGCTTATCACCAATGAAGATTAAGTTa > 1:2286171/1‑136 (MQ=255) aCTCGTTGCAGTTGAAGCAGCTGAAGAAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACTTCAAGCTTATCACCAATGAAGATTAAGTTa > 1:1572687/1‑136 (MQ=255) aCTCGTTGCAGTTGAAGCAGCTGAAGAAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACTTCAAGCTTATCACCAATGAAGATTAAGTTa > 1:533830/1‑136 (MQ=255) tGCAGTTGAAGCAGCTGAAGAAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACTTCAAGCTTATCACCAATGAAGATTAAGTTAACATTa > 2:1596643/1‑136 (MQ=255) gCAGTTGAAGCAGCTGAAGAAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACTTCAAGCTTATCACCAATGAAGATTAAGTTAACATTa > 1:1009293/1‑135 (MQ=255) gaagtagcagcagaactAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACTTCAAGCTTATCACCAATGAAGATTAAGTTAACATTAGCTa > 1:372257‑M2/18‑136 (MQ=255) agcagcTGAAGAAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACTTCAAGCTTATCACCAATGAAGATTAAGTTAACATTAGCTAACtt < 1:640203/135‑1 (MQ=255) gcagcagaactAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACTTCAAGCTTATCACCAATGAAGATTAAGTTAACATTAGCTAactttt > 2:1967624‑M2/12‑134 (MQ=255) aaccagaagaaGTAGAAAGGCTAGTTGCTGATTGTGGAGCAGCAAATCAAGCAGCAGAAGTCTTGGTTGATGTAGTAGAACCAAAGACTAAAATCTAATCACCAATCAAGAATAAGTAAACATTAGCTAACTTGtt > 2:1298717/6‑136 (MQ=255) agcagaactAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACTTCAAGCTTATCACCAATGAAGATTAAGTTAACATTAGCTAACTTGttt > 1:236884‑M2/10‑136 (MQ=255) aagaagTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACTTCAAGCTTATCACCAATGAAGATTAAGTTAACATTAGCTAACTTGTTTGCCtt > 2:1724762/1‑136 (MQ=255) agaagTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACTTCAAGCTTATCACCAATGAAGATTAAGTTAACATTAGCTAACTTGTTTGCCttt < 1:1770672/136‑1 (MQ=255) actAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACTTCAAGCTTATCACCAATGAAGATTAAGTTAACATTAGCTAACTTGTTTGCCttt < 1:728702‑M2/133‑1 (MQ=255) tAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACTTCAAGCTTATCACCAATGAAGATTAAGTTAACATTAGCTAACTTGTTTGCCTTTTc > 2:1063536‑M2/2‑136 (MQ=255) | CACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGTAGCAGAACTAGTAGCTTGGCTAGCAACTGATTGTGAAGAAGCACTAGTAGCACTGGCACTCGTTGCAGTTGAAGCAGCTGAAGAAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACTTCAAGCTTATCACCAATGAAGATTAAGTTAACATTAGCTAACTTGTTTGCCTTTTC > TrimmedAssembly_T66_contig_3/176194‑176461 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |