| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | TrimmedAssembly_T66_contig_1 | = 88613 | 152 (0.970) | 140 (0.900) | 51/260 | 0.7 | 64.8% | coding (224/300 nt) | rasttk_feature_annotation_tool=elepa@bvbrc | hypothetical protein |
| ? | TrimmedAssembly_T66_contig_1 | = 655835 | 0 (0.000) | intergenic (‑78/–) | rasttk_feature_annotation_tool=elepa@bvbrc/– | hypothetical protein/– | |||||
Only 100 of 140 total aligned reads displayed.
GGTAAGTTCATTCATGGGGAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTTAGAAATCTTTTGTGCGTTTACACAAGATATTTTACGCTCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > TrimmedAssembly_T66_contig_1/88482‑88613‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAATCACGAGTTAGGGGGGAGCGTCATGCGGATACGTCGACCGGTTCGGTTTTATCGCTCATTTTGGTTTTGGTTAAGCGTG < TrimmedAssembly_T66_contig_1/655835‑655701 GGTAAGTTCATTCATGGGGAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACT < 1:169897/135‑1GGTAAGTTCATTCATGGGGAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACT < 1:917480/135‑1GGTAAGTTCATTCATGGGGAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACT < 1:917472/135‑1GGTAAGTTCATTCATGGGGAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACT < 1:343755/135‑1 AAGTTCATTCATGGGGAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAAT > 1:2311717/1‑136 tgagTCATGGGGTATGCCTCGTGTGATGTTTTCTGTTGTTACTAAATATCATAAGGGAAGGCATTCACTTTTTCTATACACTTCAGAAATCTTTTTTGCTTTTACACAAGATATTTTACGCTCTCACTTAATTGC < 2:681737/131‑1 aCATTCATGGGGAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGC < 2:1811012/134‑1 TCATTCATGGGGAATGCCTCCTGTGATGTTTTCTGTTGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGC < 2:708277/135‑1 TCATTCATGGGGAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGC < 1:1143065/135‑1 TCATTCATGGGGAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGC < 1:307476/135‑1 TCATTCATGGGGAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGC < 2:389049/135‑1 TCATTCATGGGGAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGC < 1:1903419/135‑1 TCATTCATGGGGAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGC < 1:1814133/135‑1 TCATTCATGGGGAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGC < 1:1765770/135‑1 TCATTCATGGGGAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGC < 1:91094/135‑1 TCATTCATGGGGAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGC < 1:1732946/135‑1 TCATTCATGGGGAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGC < 1:1543922/135‑1 TCATTCATGGGGAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGC < 1:1502434/135‑1 TCATTCATGGGGAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGC < 2:2511749/135‑1 TCATTCATGGGGAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGC < 1:1331986/135‑1 TCATTCATGGGGAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGC < 1:1252500/135‑1 TCATTCATGGGGAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGC < 2:1571316/135‑1 TCATTCATGGGGAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCACTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGC < 2:424360/135‑1 TTCATGGGGAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCAC < 1:2018556/136‑1 TCATGGGGAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACT < 2:879196/136‑1 TCATGGGGAATGCCTACTGTGATGTTTTCTGTGGTTACTAAATATCATAAGTGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACT < 2:2481728/136‑1 CATGGGGAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATAACATAAGGGAAGTCATACCCTATTTCAATACAATTCAGAAATCTTTTATTCATTTACACAAGATATATTAAGCTCTCACTTAATTGCGCACT > 1:7899/1‑135 GAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTAT < 2:713406/135‑1 GAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTAT < 2:53072/135‑1 AATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAA > 1:1746818/1‑136 AATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAA > 2:1185146/1‑136 AATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAA > 2:1245741/1‑136 AATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCA < 1:1077132/126‑1 AATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGC < 1:84768/123‑1 AATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGC > 2:84768/1‑123 TGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCC < 2:1152178/135‑1 TTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATC < 2:2012464/136‑1 TCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACT < 1:1607667/109‑1 TGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTT > 2:922914/1‑136 TGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTT > 1:1608499/1‑136 TGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTT > 1:207461/1‑136 GGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGC < 2:2230326/99‑1 GGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGC > 1:2230326/1‑99 GGTTACGAAATATCATAAGGGAAGGCATTCCCTATTTCTATACACGTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATT < 2:1156340/136‑1 ATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAA < 2:2008529/136‑1 ATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAA < 2:1160778/136‑1 ATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAA < 2:2427157/136‑1 ATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAA < 2:387514/136‑1 ATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAATC < 2:225967/136‑1 ATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAATCACG > 2:1734039/1‑136 TAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAATCACGA > 2:15994/1‑136 AAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGACTCACGAG > 2:2460465/1‑136 AAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAATCACGAG < 2:8589/136‑1 GGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAATCACGAGTTA > 1:2219037/1‑136 GGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAATCACGAGTTAGGGG > 1:1002293/1‑136 CATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAATCACGAGTTAGGGG < 1:2197571/134‑1 CATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAATCACGAGTTAGGGG < 1:1094535/134‑1 ATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAATCACGAGTTAGGGGGGA > 2:102525/1‑136 ATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAATCACGAGTTAGGGGGGA > 1:416361/1‑136 ATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAATCACGAGTTAGGGGGGA > 2:1409286/1‑136 CCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAATCACGAGTTAGGGGGGAGCG < 1:225985/136‑1 CTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAATCACGAGTTAGGGGGGAGCGTC > 2:2045749/1‑136 TATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAATCACGAGTTAGGGGGGAGCGTCA > 2:2526111/1‑136 TATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAA > 2:335352/1‑113 TATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAA > 2:335287/1‑113 TATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAA < 1:335287/113‑1 ATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAATCACGAGTTAGGGGGGAGCGTCAT < 1:1245741/136‑1 TTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAATCACGAGTTAGGGGGGAGCGTCATG < 1:344452/136‑1 TCTATACAATTCAGAAATCTTTTAAGCATTTACACACGATATTTTACGCTCTCCCTTAATTGCGCACTGCCTATAATAGGCGTTAGTCCAATCGGGTATTTCATTGGAATCACGAGTTAGGGGGGAGCGTCATGCG < 2:2157090/136‑1 CTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTGAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAATCACGAGTTAGGGGGGAGCGTCATGCGG > 1:706682/1‑136 AATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAATCACGAGTTAGGGGGGAGCGTCATGCGGATACG > 2:2078846/1‑135 AATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAATCACGAGTTAGGGGGGAGCGTCATGCGGATACG > 1:912176/1‑135 AATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAATCACGAGTTAGGGGGGAGCGTCATGCGGATACG > 1:1888131/1‑135 AGAAATCTTTTATGCATTTACACAAGATATTTTACTCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAATCACGAGTTAGGGGGGAGCGTCATGCGGATCCGTCGACC > 2:1075234/1‑136 AGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAATCACGAGTTAGGGGGGAGTGTCATGCGGATACGTCGACC > 1:1239083/1‑136 AGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAATCACGAGTTAGGGGGGAGCGTCATGCGGATACGTCGACC > 1:1832544/1‑136 AGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAATCACGAGTTAGGGGGGAGCGTCATGCGGATACGTCGACC > 2:491283/1‑136 AGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAATCACGAGTTAGGGGGGAGCGTCATGCGGATACGTCGACC > 1:1807663/1‑136 AGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAATCACGAGTTAGGGGGGAGCGTCATGCGGATACGTCGACC > 1:229745/1‑136 AGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAATCACGAGTTAGGGGGGAGCGTCATGCGGATACGTCGACC > 2:259284/1‑136 AGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAATCACGAGTTAGGGGGGAGCGTCATGCGGATACGTCGACC > 2:2346773/1‑136 AGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAATCACGAGTTAGGGGGGAGCGTCATGCGGATACGTCGACC > 2:1908177/1‑136 AGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACT < 1:2332740/56‑1 AGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACT > 2:2332737/1‑56 AGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACT < 1:2332737/56‑1 AGAAATCTTTTATGCATTTACACAAGATATATTACGCTCTCACTAAATAGCTCACTGCCTATAATAGGCGTTATTCAAATCGGTTATTTCATTGGAATCACGAGTTAGGGGGGAGCGTCATGCTGATACGTCGACC > 2:2353073/1‑136 AATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAATCACGAGTTAGGGGGGAGCGTCATGCGGATACGTCGACCGGT > 2:14572/1‑136 AATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAATCACGAGTTAGGGGGGAGCGTCATGCGGATACGTCGACCG < 1:726638/134‑1 AATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAATCACGAG < 1:1532679/101‑1 AATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAATCACGAG > 2:1532679/1‑101 TCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAATCACGAGTTAGGGGGGAGCGTCATGCGGATACGTCGACCGGTTC > 1:227910/1‑136 TGCATTCACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAATCACGAGTTAGGGGGGAGCGTCATGCGGATACGTCGACCGGTTCGGTTTTA < 2:1740469/136‑1 aTTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAATCACGAGTTAGGGGGGAGCGTCATGCGGATACGTCGACCGGTTCGGTTTTATC > 1:1008921/2‑135 AGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAATCACGAGTTAGGGGGGAGCGTCATGCGGATACGTCGACCGGTTCGGTTTTATCGCTCATTTTG < 2:1881743/136‑1 ATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAATCACGAGTTAGGGGGGAGCGTCATGCGGATACGTCGACCGGTTCGGTTTTATCGCTCATTTTGGTTT > 1:1342832/1‑136 TTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAATCACGAGTTAGGGGGGAGCGTC < 1:2177090/89‑1 ACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAATCACGAGTTAGGGGGGAGCGTCATGCGGATACGTCGACCGGTTCGGTTTTATCGCTCATTTTGGTTTTGGTT > 1:503664/1‑136 TCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAATCACGAGTTAGGGGGGAGCGTCATGCGGATACGTCGACCGGTTCGGTTTTATCGCTCATTTTGGTTTTGGTTAAGCGT < 1:506522/136‑1 CACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAATCACGAGTTAGGGGGGAGCGTCATGCGGATACGTCGACCGGTTCGGTTTTATCGCTCATTTTGGTTTTGGTTAAGCGTG > 1:1712601/1‑136 CACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAATCACGAGTTAGGGGGGAGCGTCATGCGGATACGTCGACCGGTTCGGTTTTATCGCTCATTTTGGTTTTGGTTAAGCGTG > 1:1712452/1‑136 GGTAAGTTCATTCATGGGGAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTTAGAAATCTTTTGTGCGTTTACACAAGATATTTTACGCTCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > TrimmedAssembly_T66_contig_1/88482‑88613‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAATCACGAGTTAGGGGGGAGCGTCATGCGGATACGTCGACCGGTTCGGTTTTATCGCTCATTTTGGTTTTGGTTAAGCGTG < TrimmedAssembly_T66_contig_1/655835‑655701 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |