| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | TrimmedAssembly_T66_contig_2 | 2 = | 0 (0.000) | 545 (0.990) +CCTTTGATTTTTAAAGTTGGTCCCTACCGTGACCAG |
84/188 | 0.0 | 100% | coding (1/180 nt) | rasttk_feature_annotation_tool=elepa@bvbrc | hypothetical protein |
| ? | TrimmedAssembly_T66_contig_42 | 1 = | 0 (0.000) | coding (318/318 nt) | rasttk_feature_annotation_tool=annotate_proteins_km er_v2 | Transposase, IS4 family | |||||
Only 100 of 765 total aligned reads displayed.
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ACGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTTATTTTTTGGATCATCATTTATTTATATTTATCAAAGTAACGGTCTGTTATT > TrimmedAssembly_T66_contig_2/1‑134 | gaaggcttctttacatttcaatcgattctcggtgcgaggtttcgacaaggtcaccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGt < 1:1297042‑M1/3‑1 (MQ=255) tacatttcaatcgattctcggtgcgaggtttcgacaaggtcaccaaggaagccggaatcgtaatactggcgttaaccattatgaaattggtcacggtagggaccaactttaaaaatcaatggCGTAAGCAAATggg < 2:1281484‑M1/14‑1 (MQ=255) tacatttcaatcgattctcggtgcgaggtttcgacaaggtcaccaaggaagccggaatcgtaatactggcgttaaacattatgaaattggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATggg < 1:54127‑M1/14‑1 (MQ=255) tacatttcaatcgattctcggtgcgaggtttcgacaaggtcaccaaggaagccggaatcgtaatactggcgttaaacattatgaaattggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATggg < 2:2111005‑M1/14‑1 (MQ=255) tacatttcaatcgattctcggtgcgaggtttcgacaaggtcaccaaggaagccggaatcgtaatactggcgttaaacattatgaaattggtcacggtagggaccaactttaaaaatcaaagACGTAAGCAAATggg < 2:450516‑M1/15‑1 (MQ=255) tacatttcaatcgattctcggtgcgaggtttcgacaaggtcaccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaattcaatggCGTAAGCAAATggg < 2:2163477‑M1/14‑1 (MQ=255) tacatttcaatcgattctcggtgcgaggtttcgacaaggtcaccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATggg < 2:1037899‑M1/14‑1 (MQ=255) tacatttcaatcgattctcggtgcgaggtttcgacaaggtcaccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaacattaaaaatcaaaggCGTAAGCAAATggg < 1:1650991‑M1/14‑1 (MQ=255) ttcaatcgattctcggtgcgaggtttcgacaaggtcaccaaggaagccggaatcgtaatactggcgttaaacattatgaaattggtcacggtagggaccaactttaaaaatcaaagACGTAAGCAAATGGGACgag > 1:1782879‑M1/117‑136 (MQ=255) tcaatcgattctcggtgcgaggtttcgacaaggtcaccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACgaga < 2:908730‑M1/20‑1 (MQ=255) caatcgattctcggtgcgaggtttcgacaaggtcaccaaggaagccggaatcgtaatactggcgttaaacattatgaaattggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGaa < 1:2496597‑M1/21‑1 (MQ=255) aatcgattctcggtgcgaggtttcgacaaggtcaccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGaa < 2:1922993‑M1/21‑1 (MQ=255) aatcgattctcggtgcgaggtttcgacaaggtcaccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGaa < 1:1911119‑M1/21‑1 (MQ=255) aatcgattctcggtgcgaggtttcgacaaggtcaccaaggaagccggaatcgtaatactggcgataaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGCGACGAGaa < 1:1000697‑M1/21‑1 (MQ=255) tcgattctcggtgcgaggtttcgacaaggtcaccaaggaagccggaatcgtaatactggcgttaaacattatgaaattggtcacggtagggaccaactttaaaaatcaaagACGTAAGCAAATGGGACGAGAAAcc < 2:2238330‑M1/25‑1 (MQ=255) gattctcggtgcgaggtttcgacaaggtcaccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCaa < 1:1103813‑M1/26‑1 (MQ=255) attctcggtgcgaggtttcgacaaggtcaccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCaaa < 1:1998579‑M1/27‑1 (MQ=255) ttctcggtgcgaggtttcgacaaggtcaccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCaaa > 2:534359‑M1/109‑135 (MQ=255) tctcggtgcgaggtttcgacaaggtttccaaggaagccggaatcgtaatactggcgttatacattatgaaatttgtcacggtagggaccaactttaaaaatcaaagTCGTTTGCTTATTGGACGAGAAACCAAAAt > 2:71768‑M1/107‑136 (MQ=255) ttcgacaaggtcaccaaggaagccggaatcgtaatactggcgttaaacattatgaatctggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTc > 2:380546‑M1/94‑135 (MQ=255) ttcgacaaggtcaccaaggaagccggaatcgtaatactggcgttaaacattatgaaattggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTc > 2:1664656‑M1/94‑135 (MQ=255) ttcgacaaggtcaccaaggaagccggaatcgtaatactggcgttaaacattatgaaattggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTc > 1:2233787‑M1/94‑135 (MQ=255) ttcgacaaggtcaccaaggaagccggaatcgtaatactggcgttaaacattatgaaattggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTc > 2:648471‑M1/94‑135 (MQ=255) ttcgacaaggtcaccaaggaagccggaatcgtaatactggcgttaaacattatgaaattggtcacggtagggaccaactttaaaaatcaaagACGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTc > 1:1496925‑M1/93‑135 (MQ=255) ttcgacaaggtcaccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTc > 1:449853‑M1/94‑135 (MQ=255) ttcgacaaggtcaccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTc > 2:1112021‑M1/94‑135 (MQ=255) ctcgacacggtcaccaaggaagccggaatcgtaatactggcgttaaccattatgacattggtcacggtagggaccaacattaaacatcaaacgCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTc > 1:464725‑M1/94‑135 (MQ=255) tcgactaggtcaccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTccc > 2:1746611‑M1/93‑136 (MQ=255) tcgacaaggtcaccaaggaagccggaatcgtaatactgtcgttaaacattatgaaattggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTccc > 2:2394309‑M1/93‑136 (MQ=255) tcgacaaggtcaccaaggaagccggaatcgtaatactggcgttaaacattatgaaattggtcacggtagggaccaactttaaaaatcaaagACGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTccc > 1:141461‑M1/92‑136 (MQ=255) tcgacaaggtcaccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTccc > 1:1354464‑M1/93‑136 (MQ=255) tcgacaaggtcaccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTccc < 1:158913‑M1/44‑1 (MQ=255) caaggtcaccaaggaagccggaatcgtaatactggcgttaaacattatgaaattggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCAtt > 2:1606021‑M1/89‑135 (MQ=255) caaggtcaccaaggaagccggaatcgtaatactggcgttaaacattatgaaattggtcacggtagggaccaactttaaaaatcaaagACGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCAttt < 1:1057949‑M1/49‑1 (MQ=255) caaggtcaccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTc < 1:1717696‑M1/42‑1 (MQ=255) tcaccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCACATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCtt > 2:1213936‑M1/84‑135 (MQ=255) tcaccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCtt > 1:1541912‑M1/84‑135 (MQ=255) tcaccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCtt > 1:2327888‑M1/84‑135 (MQ=255) caccaaggaagccggaatcgtaatactggcgttaaacattatgaaattggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTtat < 2:1347319‑M1/54‑1 (MQ=255) caccaaggaagccggaatcgtaatactggcgttaaacattatgaaattggtcacggtagggaccaactttaaaaatcaaagACGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTtat > 1:658986‑M1/82‑136 (MQ=255) caccaaggaagccggaatcgtaatactggcgttaaacattatgaaagtggtcacggtagggaccaactttaaaaatcaaagACGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTtat > 1:627525‑M1/82‑136 (MQ=255) caccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTtat > 2:2046433‑M1/83‑136 (MQ=255) caccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTtat > 1:1272770‑M1/83‑136 (MQ=255) caccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTtat > 1:908730‑M1/83‑136 (MQ=255) caccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTtat > 2:1641340‑M1/83‑136 (MQ=255) accaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTtat < 1:208383‑M1/54‑1 (MQ=255) accaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTtat < 1:853401‑M1/54‑1 (MQ=255) accaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTtat < 2:1775986‑M1/54‑1 (MQ=255) caaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACa > 2:888187‑M1/80‑136 (MQ=255) aaggaagccggaatcgtaatactggcgttaaacattatgaaattggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACag > 2:81716‑M1/79‑136 (MQ=255) aaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaactcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACag > 1:1823067‑M1/79‑136 (MQ=255) aaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaagtCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACag > 2:1947649‑M1/79‑136 (MQ=255) aaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACag > 2:1393904‑M1/79‑136 (MQ=255) aggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAATTTCGGTTTCTCGTCCCATTTGCTTATACaga < 2:2481631‑M1/59‑1 (MQ=255) gaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACagag < 1:269023‑M1/60‑1 (MQ=255) ccggaatcgtaatactggcgttaaacattatgaaattggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAg < 1:721609‑M1/65‑1 (MQ=255) ccggaatcgtaatactggcgttaaacattatgaaattggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAg < 1:36179‑M1/65‑1 (MQ=255) ccggaatcgtaatactggcgttaaacattatgaaattggtcacggtagggaccaactttaaaaatcaaagACGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTtat < 1:931414‑M1/55‑1 (MQ=255) ccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAg < 2:95219‑M1/65‑1 (MQ=255) ccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCAGTTGCTTATACAGAGGCTAg < 1:485782‑M1/65‑1 (MQ=255) cggaatcgtaatcctggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAATATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTa > 2:2319915‑M1/71‑134 (MQ=255) cggaatcgtaatactggcgttaaacattatgaaattggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGt < 1:1964490‑M1/66‑1 (MQ=255) cggaatcgtaatactggcgttaaacattatgaaattggtcacggtagggaccaactttaaaaatcaaagACGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTa > 1:2430971‑M1/70‑134 (MQ=255) cggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTa > 2:1466725‑M1/71‑134 (MQ=255) cggaatcgtaatactggcgttaaacattatgaaactggacacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTa > 2:2540083‑M1/71‑134 (MQ=255) ggaatcgtaatactggcgttaaacattatgaaattggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTc > 2:1823347‑M1/70‑111 (MQ=255) ggaatcgtaatactggcgttaaacattatgaaattggtcacggtagggaccaactttaaaaatcaaagACGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTtat > 2:2292438‑M1/69‑123 (MQ=255) gaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTtat < 1:1149953‑M1/54‑1 (MQ=255) gaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACaga < 1:2150865‑M1/59‑1 (MQ=255) atcgtaatactggcgttaaacattatgaaattggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATg > 1:575884‑M1/67‑136 (MQ=255) atcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaagtCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATg > 2:1998579‑M1/67‑136 (MQ=255) atcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATg > 1:1753116‑M1/67‑136 (MQ=255) tcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGt > 1:303499‑M1/66‑136 (MQ=255) cgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTc > 1:2548308‑M1/65‑136 (MQ=255) aatactggcgttaaacattatgaaattggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTcaca > 1:1861264‑M1/62‑136 (MQ=255) tactggcgttaaacattatgaaattggtcacggtagggaccaactttaaaaatcaaagACGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCTTTTGCTTATACAGAGGCTAGTTATGTCACAg < 2:1803674‑M1/77‑1 (MQ=255) tactggcgttaaacattatgaaattggtcacggtagggaccaactttaaaaatcaaagACGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTtat < 2:1526774‑M1/55‑1 (MQ=255) gttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCAcagcctcgcct > 1:1198929‑M1/53‑132 (MQ=255) ttaaacattatgaaattggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCacagcctcctttt < 1:2056420‑M1/85‑6 (MQ=255) ttaaacattatgaaattggtcacggtagggaccaactttaaaaatcaaagACGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTTAtt < 2:334235‑M1/86‑1 (MQ=255) ttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGc < 2:744069‑M1/7‑1 (MQ=255) ttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTccc > 2:186594‑M1/52‑95 (MQ=255) ttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTc < 1:2193272‑M1/42‑1 (MQ=255) ttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTcaca < 1:2398106‑M1/75‑1 (MQ=255) ttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCacagcctcgcctt < 1:2028041‑M1/85‑6 (MQ=255) ttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCacagcctcgcctt < 2:289225‑M1/85‑6 (MQ=255) ttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCacagcctcatttt < 2:1715389‑M1/85‑6 (MQ=255) ttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCctcttttc < 2:1573076‑M1/85‑4 (MQ=255) tgaaattggtcacggtagggaccaactttaaaaatcaaagACGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTTATTTTTTGGatca > 2:1162420‑M1/41‑136 (MQ=255) gaaattggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCAttt > 2:2427228‑M1/41‑88 (MQ=255) gaaattggtcacggtagggaccaactttaaaaatcaaagACGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTTATTTTTTGGatca < 1:782626‑M1/96‑1 (MQ=255) acggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCtt < 2:2349810‑M1/52‑1 (MQ=255) agtgaccaactttaaaaatcaaagACGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTTATTTTTTGGATCATCATTtatttatatt > 1:1222012‑M1/25‑135 (MQ=255) tttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGcc < 2:576144‑M1/78‑1 (MQ=255) tttaaaaatcaaagACGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTTATTTTTTGGATCATCATTTATTTATATTTATCAAAGTa < 1:2256824‑M1/121‑1 (MQ=255) taaaaatcaaagACGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTTATTTTTTGGATCATCATTTATTTATATTTATCAAAGTAACg < 1:237912‑M1/124‑1 (MQ=255) aatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTtct < 2:494079‑M1/38‑1 (MQ=255) atcaaagACGTAAGCAAATGGGACGAGAAACCAAAAGTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCGCTTATTTTTTGGATCATCATTTAGTTATATTTATCAAAGTAACgg < 1:2119152‑M1/125‑1 (MQ=255) aggcgtaAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTTcgtgttcagttgatttttgattggcggttgcaagcaattcaatctgccgca < 2:2184495‑M1/133‑52 (MQ=255) agccGTAAGCAACTGCTACGAGAAACCAAAATTCGGTTTCTAGTCCCATTTGCTTATACAGAGGATAGTTATGTCACAGCCTCTTATTTTTTGGATCATCATTTATTTATATTTATCAAAGTAACGGTCTGTTAtt < 1:995695/133‑1 (MQ=37) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ACGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTTATTTTTTGGATCATCATTTATTTATATTTATCAAAGTAACGGTCTGTTATT > TrimmedAssembly_T66_contig_2/1‑134 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |