| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | TrimmedAssembly_T66_contig_3 | = 262583 | 0 (0.000) | 107 (0.230) +GGTAGCGTCAAGAATCTTGTGTAAATGAAATGCCTTCGTATATATAATATGTATCTAACT |
36/140 | 0.6 | 100% | intergenic (+2/–) | rasttk_feature_annotation_tool=elepa@bvbrc/– | hypothetical protein/– |
| ? | TrimmedAssembly_T66_contig_36 | = 864 | 0 (0.000) | intergenic (+2/–) | rasttk_feature_annotation_tool=annotate_proteins_km er_v2/– | Transposase/– | |||||
Only 100 of 1444 total aligned reads displayed.
AAGAACAATTTCCAACGGAAGATTCACTGGATCGCTTCCTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > TrimmedAssembly_T66_contig_36/729‑864 | aaGAACAATTTCCAACGGAAGATTCACTGGATCGCTTCCTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCAtttattta < 1:446725/136‑1 (MQ=40)aaGAACAATTTCCAACGGAAGATTCACTGGATCGCTTCCTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCAtttattta < 1:2087015/136‑1 (MQ=40)aaGAACAATTTCCAACGGAAGATTCACTGGATCGCTTCCTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCAtttattta < 1:967878/136‑1 (MQ=40) gAACAATTTCCAACGGAAGATTCACTGGATCGCTTCCTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAag < 1:2275312‑M2/136‑3 (MQ=255) aCAATTTCCAACGGAAGATTCACTGGATCGCTTCCTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagtt > 1:117540‑M2/1‑132 (MQ=255) aCAATTTCCAACGGAAGATTCACTGGATCGCTTCCTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagtt < 2:2544252‑M2/136‑5 (MQ=255) aCAATTTCCAACGGAAGATTCACTGGATCGCTTCCTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagtt < 1:1920235‑M2/136‑5 (MQ=255) aCAATTTCCAACGGAAGATTCACTGGATCGCTTCCTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagtt < 1:1699637‑M2/136‑5 (MQ=255) aCAATTTCCAACGGAAGATTCACTGGATCGCTTCCTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagtt < 1:1503799‑M2/136‑5 (MQ=255) aCAATTTCCAACGGAAGATTAACTGGATCGCTTCCTGGTTTCTCAGTATAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagtt < 1:1085135‑M2/136‑5 (MQ=255) aCAATGTCCAACGGAAGATTCACTGGATCGCTTCCTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGATACCATGGAAGCATCATTTATTTAagtt > 2:1632350‑M2/1‑132 (MQ=255) cAATTTCCAACGGAAGATTCACTGGATCGCTTCCTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagtta > 2:2377029‑M2/1‑131 (MQ=255) tttCAAACTGATTATTAACTGGATCTCTTCCTGGTTTCTCAGTTTTATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGTTGGTTCAAAGGACTCCAGGACACCTTGGAAGCATAATTTATTTAagttagat > 2:1915513‑M2/1‑128 (MQ=255) tCCAACGGAAGATTCACTGGATCGCTTCCTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatac > 1:1225189‑M2/1‑126 (MQ=255) tCCAACGGAAGATTCACTGGATCGCTTCCTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatac > 2:2005541‑M2/1‑126 (MQ=255) ccAACGGAAGATTCACTGGATCGCTTCCTGGTTTCTCAGTTTCATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGACGCATCATTTATTTAagttagataca < 2:2244433‑M2/136‑12 (MQ=255) aCGGAAGATTCACTGGATCGCTTCCTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatat > 1:326‑M2/1‑122 (MQ=255) ttCACTGGATCGCTTCCTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatata < 2:333254‑M1/136‑23 (MQ=255) ttCACTGGATCGCTTCCTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatat < 1:1994158‑M1/135‑22 (MQ=255) ggATCGCTTCCTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatatacgaagg < 1:250223‑M1/136‑29 (MQ=255) tCGCTTCCTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatatacgaaggcat > 1:2223392‑M1/1‑105 (MQ=255) cTTCCTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttc < 1:1135474‑M2/136‑35 (MQ=255) cTTCCTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttc < 1:1278413‑M2/136‑35 (MQ=255) ttCCTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttc > 2:1469240‑M2/1‑101 (MQ=255) cTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcattt > 2:479487‑M2/1‑98 (MQ=255) ggTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttac < 2:1293844‑M2/136‑41 (MQ=255) ggTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttac > 2:1526806‑M2/1‑96 (MQ=255) ggTTTCTCAGTTTAATGTTTATAAAGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattaaattaacgaaggcatttcatttac < 2:626135‑M2/136‑41 (MQ=255) tcAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGTACTCCAGGACACCTTGGAAGCATCATTTATTTAatttagatacatattatatgtacgaaggaatttcatttacacaaga < 2:1425929‑M2/136‑47 (MQ=255) cAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagtta > 2:1954191‑M2/1‑89 (MQ=255) aGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagat < 2:358063‑M2/135‑48 (MQ=255) aGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatac < 2:2196312‑M2/98‑11 (MQ=255) ttAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattct > 1:2342023‑M2/1‑85 (MQ=255) tAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttg < 1:1803873‑M1/136‑53 (MQ=255) tGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacg < 1:1557245‑M1/136‑56 (MQ=255) tGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacg < 2:2507553‑M1/136‑56 (MQ=255) taACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctaccg > 1:1891654‑M2/1‑75 (MQ=255) aaCGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccaa > 2:1203403‑M1/1‑74 (MQ=255) aCGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgtt < 1:497374‑M2/136‑64 (MQ=255) aCGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctacctga > 1:299944‑M1/1‑73 (MQ=255) aGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctacctgaaatc < 1:1370841‑M1/134‑68 (MQ=255) gTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttac > 2:1578279‑M2/1‑66 (MQ=255) gTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctaccgattgttaat < 2:1245240‑M2/136‑71 (MQ=255) tctcTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgaaaagttca < 1:103355‑M2/135‑71 (MQ=255) ctctGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgcctcccgat > 1:581859‑M2/1‑64 (MQ=255) ctctGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgcctcccgat > 1:790746‑M2/1‑64 (MQ=255) ctctGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgaaaagttcat > 2:1108554‑M2/1‑64 (MQ=255) ctctGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctacctgaaatcaaac < 2:1145256‑M1/135‑72 (MQ=255) tGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgttttttagaagcgg > 2:445190‑M2/1‑61 (MQ=255) tGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgcctcccgattagtc > 2:836731‑M2/1‑61 (MQ=255) aGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACCCCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgaaaagttcatcatcatt < 2:2469137‑M2/136‑79 (MQ=255) ggATCCACCGAGGTTTCAAATGACTACAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgcctcccgattagtcacatc > 2:2320562‑M2/1‑55 (MQ=255) ggATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgcctcccgattagtcacatc > 2:1688375‑M2/1‑55 (MQ=255) ggATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgcctcccgattagtcacatc > 2:2094811‑M2/1‑55 (MQ=255) ggATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgcctcccgattagtcacatc > 2:409208‑M2/1‑55 (MQ=255) ccACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccaattaagtacaagctctgaatactc > 2:950030‑M1/1‑51 (MQ=255) cACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgcctcccgattagtcacatcattcag < 1:142086‑M2/136‑87 (MQ=255) cGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctaccgattgttaataacgtaataatatacaaaa > 2:1327500‑M2/1‑47 (MQ=255) cGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctaccgattgttaataacgtaataatatacaaaa > 1:2448014‑M2/1‑47 (MQ=255) gggTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgttttttagaagcggttacgcatttatggta > 2:1878774‑M2/1‑44 (MQ=255) tCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcattt < 2:789671‑M2/78‑39 (MQ=255) tCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctaccgtgtaatactgtacacccatcaggttagagacatt > 1:165905‑M2/1‑40 (MQ=255) tCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctaccgattgttaataacgtaataatatacaaaatatctgt < 1:626600‑M2/136‑97 (MQ=255) aaaGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgttttttagaagcggttacgcatttatggtaatctagt < 1:662130‑M2/136‑99 (MQ=255) aaaGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgttttttagaagcggttacgcatttatggtaatctagt > 1:349315‑M2/1‑38 (MQ=255) aaaGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctaccgtgtaatactgtacacccatcaggttagagacattata > 2:203631‑M2/1‑38 (MQ=255) aaGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgcctcccgattagtcacatcattcagttctaacttatcc > 1:184394‑M2/1‑37 (MQ=255) aGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgttttttagaagcggttacgcatttatggtaatctagtga > 2:1845019‑M2/1‑36 (MQ=255) aGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctacca < 2:1009299‑M1/97‑62 (MQ=255) aCTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctacctgaaatcaaaaggtgtgggaaaaattattatttccgaagtcg < 1:879967‑M1/135‑103 (MQ=255) tCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctacctgaaatcaaaaggtgtgggaaaaattattatatccgaagtcgtaa < 1:2407146‑M1/136‑106 (MQ=255) aGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgttttttagaagcggttacgcatttatggtagtctagtgaatagatta < 2:868757‑M2/136‑109 (MQ=255) aGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgttttttagaagcggttacgcatttatggtaatctagtgaatagatta < 2:1799936‑M2/136‑109 (MQ=255) aGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccaattaagtacaagctctgaatactcaaatccaacgtttaagctacaat > 1:1956524‑M1/1‑28 (MQ=255) aGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctacctgaaatcaaaaggtgtgggaaaaattattatatcagaagtcgtaaagc > 2:684947‑M1/1‑28 (MQ=255) aGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctaccgtgtaatactgtacacccatcaggttagagacattatacaatcctcta < 2:71247‑M2/136‑109 (MQ=255) acacCTTGGAATCATCATTTATTTAagttagatacatattatatgtacgaaggaatttcatttacacaagattcttgacgctaccgcctcccgattagtcacatcattcagttctaacttatccaactcatc > 1:1750826‑M2/1‑25 (MQ=255) acacCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgttttttagaagcggttacgcatttatggtaatctagtgaatagattatt > 1:1007562‑M2/1‑25 (MQ=255) tGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgttttttagaagcggttacgcatttatggtaatctagtgaatagattattagatagg > 2:2417092‑M2/1‑19 (MQ=255) ggAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgttttttagaagcggttacgcatttatggtaatctagtgaatagattattagataggg < 1:2368015‑M2/136‑119 (MQ=255) ggAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgttttttagaagcggttacgcatttatggtaatctagtgaatagattattagataggg < 2:583520‑M2/136‑119 (MQ=255) ggAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgcctcccgattagtcacatcattcagttctaacttatccaactcatcaacaagtg < 1:1335585‑M2/133‑116 (MQ=255) ggAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgcctcccgattagtcacatcattcagttctaacttatccaactcatcaacaagtg < 2:304294‑M2/133‑116 (MQ=255) ggAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccaattaagtacaagctctgaatactcaaatccaacgtttaagctacaattcataaccga > 2:1374506‑M1/1‑18 (MQ=255) ggAAGCATCATTTATTTAagttagatacatattatatgaacgaaggcatttcatttacacaagattcttgacgctaccgcctcccgattagtcacatcattcagttctaacttatccaactcatcaacaagtg < 1:1616146‑M2/133‑116 (MQ=255) aaGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgttttttagaagcggttacgc < 1:5272‑M2/97‑82 (MQ=255) aaGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccaattaagtacaagctctgaatactcaaatccaacgtttaagctacaattcataaccgatt > 2:1734794‑M1/1‑16 (MQ=255) atcatTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgcctcccgattagtcacatcattcagttctaacttatccaactcatcaacaagtgtctgggtat > 1:2160653‑M2/1‑12 (MQ=255) tcatTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgttttttagaagcggttacgcatttatggtaatctagtgaatagattattagatagggtggtggc > 1:930861‑M2/1‑11 (MQ=255) tcatTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctaccgtgtaatactgtacacccatcaggttagagacattatacaatcctctaacactcattcttcctag > 1:71247‑M2/1‑11 (MQ=255) atttatttAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgcctcccgattagtc < 1:756424‑M2/84‑76 (MQ=255) atttatttAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgcctcccgattagtc > 2:756424‑M2/1‑9 (MQ=255) tttatttaagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgaaaagttcatcatcattactattagtatcaagttgactatcaacgtagtctgcaattcgctttgct < 2:2289810‑M2/135‑128 (MQ=255) tttatttaagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccaattaagtacaagctctgaatactcaaatccaacgtttaagctacaattcataaccgattacgtttgt > 1:2027484‑M1/1‑8 (MQ=255) tttatttaagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctacctgaaatcaaaaggtgtgggaaaaattattatatccgaagtcgtaaagcgcgggtagaactaacagtca > 2:527493‑M1/1‑8 (MQ=255) tttatttaagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctacctgaaatcaaaaggtgtgggaaaaattattatatccgaagtcgtaaagcgcgggtagaactaacagtca > 1:2532887‑M1/1‑8 (MQ=255) tttatttaagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctaccgtgtaatactgtacacccatcaggttagagacattatacaatcctctaacactcattcttcctagaaa > 1:406069‑M2/1‑8 (MQ=255) tttatttaagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctaccgattgttaataacgtaataatatacaaaatatctgttcatattactgaagccaacaaaaaagagccaa < 2:1069698‑M2/136‑129 (MQ=255) tatttaagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctaccgattgttaataacgtaataatatacaaaatatctgttcatattactgaagccaacaaaaaagagccaaat > 1:1454192‑M2/1‑6 (MQ=255) tttaagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgaaaagttcatcatcattactattagtatcaagttgactatcaacgtagtctgcaattcgctttgctaccaa > 2:216192‑M2/1‑4 (MQ=255) | AAGAACAATTTCCAACGGAAGATTCACTGGATCGCTTCCTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > TrimmedAssembly_T66_contig_36/729‑864 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |