| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | TrimmedAssembly_T66_contig_42 | 1 = | 0 (0.000) | 101 (0.250) +CTGGTCACGGTAGGGACCAACTTTAAAAATCAAAGGCGTAAGCAAATGGGACGAGAA |
34/146 | 0.5 | 100% | coding (318/318 nt) | rasttk_feature_annotation_tool=annotate_proteins_km er_v2 | Transposase, IS4 family |
| ? | TrimmedAssembly_T66_contig_6 | 1 = | 0 (0.000) | intergenic (–/+72) | –/rasttk_feature_annotation_tool=annotate_proteins_km er_v2 | –/Pyruvate oxidase (EC 1.2.3.3) | |||||
Only 100 of 150 total aligned reads displayed.
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ACCAAAATTCGTTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTCGTTCACACTGACTATTCGACGTTGAACTCCTTGAAATAACTGGTTAGTGGTTTCAATTCGTTCGCGTCATATTT > TrimmedAssembly_T66_contig_6/1‑135 | ggtgcgaggtttcgacaaggtcaccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggcgtaagcaaatgggacgagaaACCAAAATTCGt < 1:992977‑M2/12‑1 (MQ=255) gaggtttcgacaaggtcaccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggcgtaagcaaatgggacgagaaACCAAAATTCGTTTtc > 1:1915405‑M2/120‑135 (MQ=255) ttcgacaaggtcaccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggcgtaagcaaatgggccgagaaACCAAAATTCGTTTTCTCGTc < 2:1315070‑M2/21‑1 (MQ=255) ttcgacaaggtcaccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggcgtaagcaaatgggacgagaaACCAAAATTCGTTTTCTCGTc < 2:2010713‑M2/21‑1 (MQ=255) ttcgacaaggtcaccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggcgtaagcaaatgggacgagaaACCAAAATTCGTTTTCTCGTc < 2:1966013‑M2/21‑1 (MQ=255) ttcgacaaggtcaccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggcgtaagcaaatgggacgagaaACCAAAATTCGTTTTCTCGTc < 2:1568170‑M2/21‑1 (MQ=255) ttcgacaaggtcaccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggcgtaagcaaatgggacgagaaACCAAAATTCGTTTTCTCGTc < 2:1257710‑M2/21‑1 (MQ=255) ttcgacaaggtcaccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggcgtaagcaaatgggacgagaaACCAAAATTCGTTTTCTCGTc < 1:401829‑M2/21‑1 (MQ=255) ttcgacaaggtcaccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggcgtaagcaaatgggacgagaaACCAAAATTCGTTTTCTCGTc < 1:2414476‑M2/21‑1 (MQ=255) tcgacaaggtcaccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggcgtaagcaaatgggacgagaaACCAAAATTCGTTTTCTCGTccc < 2:1943198‑M2/23‑1 (MQ=255) tcgacaaggtcaccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggcgtaagcaaatgggacgagaaACCAAAATTCGTTTTCTCGTccc < 1:1203136‑M2/23‑1 (MQ=255) tcgacaaggtcaccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggcgtaagcaaatgggacgagaaACCAAAATTCGTTTTCTCGTccc < 2:468414‑M2/23‑1 (MQ=255) caaggtcaccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggcgtaagcaaatgggacgagaaACCAAAATTCGTTTTCTCGTccc < 1:394219‑M2/23‑1 (MQ=255) caaggtcaccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggcgtaagcaaatgggacgagaaACCAAAATTCGTTTTCTCGTccc > 2:394219‑M2/110‑132 (MQ=255) caaggtcaccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggcgtaagcaaatgggacgagaaACCAAAATTCGTTTTCTCGTCCCAtt < 1:1954935‑M2/26‑1 (MQ=255) caacgtcaccaaggaagccggaatcgtaatactggcgttaaacattctgaaactggtcacggtagggaccaactttaaaaatcaaaggcgtaagcaaatgggacgagaaACCAAAATTCGTTTTCTCGTCCCAtt < 1:1499384‑M2/26‑1 (MQ=255) aggtcaccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggcgtaagcaaatgggacgcgaaACCAAAATTCGTTTTCTCGTCCCATTTGc < 1:969711‑M2/29‑1 (MQ=255) caccacggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggcgtaagcaaatgggacgagaaACCAAAATTCGTTTTCTCGTCCCATTTGCTtat < 2:221056‑M2/33‑1 (MQ=255) caccaaggcagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggcgtaagcaaaagggacgagacACCAAAATTCGTTTTCTCGTCCCATTTGCTtat < 1:2098237‑M2/33‑1 (MQ=255) caccaaggaagccggactcgtaatactggcgataaacattatgacactggtcacggtagggaccaactataacaatcaaaggcgtaagcaaatgggacgagaaACCAAAATTCGTTTTCTCGTCCCATTTGCTtat < 1:2437614‑M2/33‑1 (MQ=255) caccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggcgtaagcaaatgggacgagacACCAAAATTCGTTTTCTCGTCCCATTTGCTtat < 2:1194282‑M2/33‑1 (MQ=255) caccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggcgtaagcaaatgggacgagaaACCAAAATTCGTTTTCTCGTCCCATTTGCTtat < 2:429729‑M2/33‑1 (MQ=255) caccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggcgtaagcaaatgggacgagaaACCAAAATTCGTTTTCTCGTCCCATTTGCTtat < 2:1555734‑M2/33‑1 (MQ=255) caccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggcgtaagcaaatgggacgagaaACCAAAATTCGTTTTCTCGTCCCATTTGCTtat < 2:739303‑M2/33‑1 (MQ=255) caccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggcgtaagcaaatgggacgagaaACCAAAATTCGTTTTCTCGTCCCATTTGCTtat < 1:2098254‑M2/33‑1 (MQ=255) caccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggcgtaagcaaatgggacgagaaACCAAAATTCGTTTTCTCGTCCCATTTGCTtat < 2:512262‑M2/33‑1 (MQ=255) caccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggcgtaagcaaatgggacgagaaACCAAAATTCGTTTTCTCGTCCCATTTGCTtat < 1:2401973‑M2/33‑1 (MQ=255) accaaggaagccggactcgtaatcctggcgttaaacattatgaacctggtcacggtagggaccaactttaaaaatcacaggcgtaagcaaatgggacgagaaCCCAAAATTCGTTTTCTCGTCCCATTTGCTtat < 1:718266‑M2/33‑1 (MQ=255) accaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggcgtaagcaaattggacgagaaACCAAAATTCGTTTTCACGTCCCATTTGCTtat > 1:1347986‑M2/103‑135 (MQ=255) accaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggcgtaagcaaatgggacgagaaACCAAAATTCGTTTTCTCGTCCCATTTGCTtat > 2:258808‑M2/103‑135 (MQ=255) aaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggcgtaagcaaatgggacgagaaACCAAAATTCGTTTTCTCGTCCCATTTGCTTATACag < 2:75899‑M2/37‑1 (MQ=255) aaggaagacggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggcgtaagcaaatgggacgagaaACCAAAATTCGTTTTCTCGTCCCATTTGCTTATACag < 2:1877038‑M2/37‑1 (MQ=255) aagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggcgtaagcaaatgggacgagaaACCAAAATTCGTTTTCTCGTCCCATTTGCTTATACagag < 2:2122118‑M2/39‑1 (MQ=255) aagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggcgtaagcaaatgggacgagaaACCAAAATTCGTTTTCTCGTCCCATTTGCTTATACagag < 2:824776‑M2/39‑1 (MQ=255) cggaatcgtaatactggcgttaaacattatgaaactggtcacggtcgggaccaactttaaaaatcaaaggcgtaagcaaatgggacgagaaACCAAAATTCGTTTTCTCGTCCCATTTGCTTATACAGAGGCTAGt > 2:1432665‑M2/92‑136 (MQ=255) cggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggcgtaagcaaatgggacgagaaACCAAAATTCGTTTTCTCGTCCCATTTGCTTATACAGAGGCTa < 2:1149266‑M2/43‑1 (MQ=255) cggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggcgtaagcaaatgggacgagaaACCAAAATTCGTTTTCTCGTCCCATTTGCTTATACAGAGGCTa < 2:1149265‑M2/43‑1 (MQ=255) gaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggcgtaagcaaatgggacgagaaACCAAAATTCGTTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTa > 1:1580481‑M2/90‑136 (MQ=255) cgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggcgtaagcaaatgggacgagaaACCAAAATTCGTTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTc < 2:1353228‑M2/51‑1 (MQ=255) cgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggcgtaagcaaatgggacgagaaACCAAAATTCGTTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTc < 1:2546591‑M2/51‑1 (MQ=255) atactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggcgtaagcaaatgggacgagaaACCAAAATTCGTTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAg < 2:1894322‑M2/55‑1 (MQ=255) atactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggcgtaagcaaatgggacgagaaACCAAAATTCGTTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAg < 2:2036392‑M2/55‑1 (MQ=255) tactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggcgtaagcaaatgggacgagaaACCCAAATTCGTTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAg > 1:507407‑M2/81‑135 (MQ=255) tactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggcgtaagcaaatgggacgagaaACCAAAATTCGTTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAg > 2:884056‑M2/81‑135 (MQ=255) ctggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggcgtaagcaaatgggacgagaaACCAAAATTCGTTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGcc > 1:1484640‑M2/79‑135 (MQ=255) ggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggcgtaagcaaatgggacgagaaACCAAAATTCGTTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCctct < 1:1441115‑M2/60‑1 (MQ=255) cgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggcgtaagcaaatgggacgagaaACCAAAATTCGTTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCtctc < 2:2035607‑M2/61‑1 (MQ=255) ttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggcgtaagcaaatgggacgagaaACCAAAATTCGTTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTcac < 2:144517‑M2/53‑1 (MQ=255) ttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggcgtaagcaaatgggacgagaaACCAAAATTCGTTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTcac > 1:144517‑M2/73‑125 (MQ=255) ttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggcgtaagcaaatgggacgagaaACCAAAATTCGTTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTCGt > 1:1544487‑M2/73‑135 (MQ=255) ttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggcgtaagcaaatgggacgagaaACCAAAATTCGTTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTCGt > 1:175038‑M2/73‑135 (MQ=255) ttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggcgtaagcaaatgggacgagaaACCAAAATTCGTTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTCGt > 2:173117‑M2/73‑135 (MQ=255) ttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggcgtaagcaaatgggacgagaaACCAAAATTCGTTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTCGt > 1:2132135‑M2/73‑135 (MQ=255) ttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggcgtaagcaaatgggacgagaaACCAAAATTCGTTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTCGt > 1:2132144‑M2/73‑135 (MQ=255) ttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggcgtaagcaaatgggacgagaaACCAAAATTCGTTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTCGt > 1:219238‑M2/73‑135 (MQ=255) ttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggcgtaagcaaatgggacgagaaACCAAAATTCGTGGTCTCGTCCCATTGGCTTATACAGAGGCTAGTTAAGTCACAGCCTCTCGt > 1:568680‑M2/73‑135 (MQ=255) taaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggcgtaagcaaatgggacgagaaACCAAAATTCGTTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTCGTTc < 1:1156152‑M2/65‑1 (MQ=255) taaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggcgtaagcaaatgggacgagaaACCAAAATTCGTTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTCGTTc < 1:701610‑M2/65‑1 (MQ=255) cattatgaaactggtcacggtagggaccaactttaaaaatcaaaggcgtaagcaaatgggacgagaaACCAAAATTCGTTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTCGTTcac > 1:970872‑M2/68‑134 (MQ=255) cattatgaaactggtcacggtagggaccaactttaaaaatcaaaggcgtaagcaaatgggacgagaaACCAAAATTCGTTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTCGTTCacac < 1:1343708‑M2/69‑1 (MQ=255) tgaaactggtcacggtagggaccaactttaaaaatcaaaggcgtaagcaaatgggacgagaaACCAAAATTCGTTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTCGTTCACACTGACt > 2:716695‑M2/63‑136 (MQ=255) tgaaactggtcacggtagggaccaactttaaaaatcaaaggcgtaagcaaatgggacgagaaACCAAAATTCGTTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTCGTTCACACTGACt < 2:1103813‑M2/74‑1 (MQ=255) tgaaactggtcacggtagggaccaactttaaaaatcaaaggcgtaagcaaatgggacgagaaACCAAAATTCGTTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTCGTTCACACTGACt < 1:492825‑M2/74‑1 (MQ=255) tgaaactggtcacggtagggaccaactttaaaaatcaaaggcgtaagcaaatgggacgagaaACCAAAATTCGTTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTCGTTCACACTGACt < 1:835476‑M2/74‑1 (MQ=255) tgaaactggtcacggtagggaccaacattaaaaatcaaaggcgtaagcaaatgggacgagaaACCAAAATTCGTTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTCGTTCACACTGACt < 1:143245‑M2/74‑1 (MQ=255) gaaactggtcacggtagggaccaactttaaaaatcaaaggcgtaagcaaatgggacgataaACCAAAAATCGTTTTCTCGTCCCATTTGCTTATAAAGAGGCTAGTTATGTCACAGCCTCTCGTTCAAAATGACTa > 1:1937370‑M2/62‑136 (MQ=255) gaaactggtcacggtagggaccaactttaaaaatcaaaggcgtaagcaaatgggacgagaaACCAAAATTCGTTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTCGTTCACACTGACTa > 2:1752093‑M2/62‑136 (MQ=255) gaaactggtcacggtagggaccaactttaaaaatcaaaggcgtaagcaaatgggacgagaaACCAAAATTCGTTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTCGTTCACACTGACTa > 1:1544670‑M2/62‑136 (MQ=255) gaaactggtcacggtagggaccaactttaaaaatcaaaggcgtaagcaaatgggacgagaaACCAAAATTCGTTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTCGTTCACACTGACTa > 2:307594‑M2/62‑136 (MQ=255) gaaactggtcacggtagggaccaactttaaaaatcaaaggcgtaagcaaatgggacgagaaACCAAAATTCGTTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTCGTTCACACTGACTa > 1:892067‑M2/62‑136 (MQ=255) gaaactggtcacggtagggaccaactttaaaaatcaaaggcgtaagcaaatgggacgagaaACCAAAATTCGTTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTCGTTCACACTGACTa > 1:1852434‑M2/62‑136 (MQ=255) tcacggtagggaccaactttaaaaatcaaaggcgtaagcaaatgggacgagaaACCAAAATTCGTTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTCGTTCACACTGACTATTCGACGt > 1:620718‑M2/54‑136 (MQ=255) cacggtagggaccaactttaaaaatcaaaggcgtaagcaaatgggacgagaaCCCAAAATTCGTTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTCGTTCACACTGACTATTCGACGtt < 1:2562737‑M2/84‑1 (MQ=255) cacagtagggaccaactttaaaaatcaaaggcgtaagcaaatgggacgagaaACCAAAATTCGTTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTCGTTCACACTGACTATTCGACGtt < 1:1148213‑M2/84‑1 (MQ=255) acggtagggaccaactttaaaaatcaaaggcgtaagcaaatgggacgagaaACCAAAATTCGTTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTCGTTCACACTGACTATTCGACGTTg > 1:1115900‑M2/52‑136 (MQ=255) acggtagggaccaactttaaaaatcaaaggcgtaagcaaatgggacgagaaACCAAAATTCGTTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTCGTTCACACTGACTATTCGACGTTg > 2:931644‑M2/52‑136 (MQ=255) acggtagggaccaactttaaaaatcaaaggcgtaagcaaatgggacgagaaACCAAAATTCGTTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTCGTTCACACTGACTATTCGACGTTg > 1:699121‑M2/52‑136 (MQ=255) ccaactttaaaaatcaaaggcgtaagcaaatgggacgagaaACCAAAATTCGTTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTCGTTCACACTGACTATTCGACGTTGAACTCCTTGa < 2:970872‑M2/95‑1 (MQ=255) ccaactttaaaaatcaaaggcgtaagcaaatgggacgagaaACCAAAATTCGTTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTCGTTCACACTGACTATTCGACGTTGAACTCCTTGa < 1:323297‑M2/95‑1 (MQ=255) aactttaaaaatcaaaggcgtaagcaaatgggacgagaaACCAAAATTCGTTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTCGTTCACACTGACTATTCGACGTTGAACTCCTTGaaa < 2:991849‑M2/97‑1 (MQ=255) aactttaaaaatcaaaggcgtaagcaaatgggacgagaaACCAAAATTCGTTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTCGTTCACACTGACTATTCGACGTTGAACTCCTTGaaa < 1:1111610‑M2/97‑1 (MQ=255) tttaaaaatcaacggcgtaagcaaatgggacgagaaACCAAAATTCGTTTTCTCGTCCCATTTGCTTATACTGAGGCTAGTTATGTCACAGCCTCTCGTTCACACTGACt < 2:1453464‑M2/74‑1 (MQ=255) tttaaaaatcaaaggcgtaagcaaatgggacgagaaACCAAAATTCGTTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTCGTTCACACTGACTATTCGACGTTGAACTCCTTGAAATa > 2:1579145‑M2/37‑135 (MQ=255) tttaaaaatcaaaggcgtaagcaaatgggacgagaaACCAAAATTCGTTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTCGTTCACACTGACTATTCGACGTTGAACTCCTTGAAATa > 1:1600327‑M2/37‑135 (MQ=255) tttaaaaatcaaaggcgtaagcaaatgggacgagaaACCAAAATTCGTTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTCGTTCACACTGACTATTCGACGTTGAACTCCTTGAAATa > 1:1729747‑M2/37‑135 (MQ=255) tttaaaaatcaaaggcgtaagcaaatgggacgagaaACCAAAATTCGTTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTCGTTCACACTGACTATTCGACGTTGAACTCCTTGAAATa > 2:1260284‑M2/37‑135 (MQ=255) tttaaaaatcaaaggcgtaagcaaatgggacgagaaACCAAAATTCGTTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTCGTTCACACTGACTATTCGACGTTGAACTCCTTGAAATa > 2:2424481‑M2/37‑135 (MQ=255) tttaaaaatcaaaggcgtaagcaaatgggacgagaaACCAAAATTCGTTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTCGTTCACACTGACTATTCGACGTTGAACTCCTTGAAATa > 2:2007768‑M2/37‑135 (MQ=255) tttaaaaatcaaaggcgtaagcaaatgggacgagaaACCAAAATTCGTTTTCTCGTCCCAGTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTCGTTCACACTGACTATTCGACGTTGAACTCCTTGAAATa > 1:2492192‑M2/37‑135 (MQ=255) taaaaatcaaaggcgtaagcaaatgggacgagaaACCAAAATTCGTTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTCGTTCACACTGACt > 2:1529132‑M2/35‑108 (MQ=255) taaaaatcaaaggcgtaagcaaatgggacgagaaACCAAAATTCGTTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTCGTTCACACTGACTATTCGACGTTGAACTCCTTGAAATa > 1:327530‑M2/35‑133 (MQ=255) taaaaatcaaaggcgtaagcaaatgggacgagaaACCAAAATTCGTTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTCGTTCACACTGACTATTCGACGTTGAACTCCTTGAAATa > 2:2520311‑M2/35‑133 (MQ=255) taaaaatcaaaggcgtaagcaaatgggacgagaaACCAAAATTCGTTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTCGTTCACACTGACTATTCGACGTTGAACTCCTTGAAATa > 1:1413890‑M2/35‑133 (MQ=255) gcaaatgggacgagaaACCAAAATTCGTTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTCGTTCACACTGACTATTCGACGTTGAACTCCTTGTAATAACTGGTTAGTGGTTTCAAttc > 2:2351882‑M2/17‑136 (MQ=255) gcaaatgggacgagaaACCAAAATTCGTTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTCGTTCACACTGACTATTCGACGTTGAACTCCTTGAAATAACTGGTTAGTGGTTTCAAttc > 2:2300055‑M2/17‑136 (MQ=255) aaatgggacgagaaACCAAAATTCGTTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTCGTTCACACTGACTATTCGACGTTGAACTCCTTGAAATAACTGGTTAGTGGTTTCAAttcgt > 2:386895‑M2/15‑136 (MQ=255) aaatgggacgagaaACCAAAATTCGTTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTCGTTCACACTGACTATTCGACGTTGAACTCCTTGAAATAACTGGTTAGTGGTTTCAAttcg < 2:523969‑M2/121‑1 (MQ=255) aaatgggacgagaaACCAAAATTCGTTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTCGTTCACACTGACTATTCGACGTTGAACTCCTTGAAATAACTGGTTAGTGGTTTCAAttc < 1:235132‑M2/120‑1 (MQ=255) gaaACCAAAATTCGTTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTCGTTCACACTGACTATTCGACGTTGAACTCCTTGAAATAACTGGTTAGTGGTTTCAATTCGTTCGCGTCata < 1:1258395‑M2/132‑1 (MQ=255) aACCAAAATTCGTTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTCGTTCACACTGACTATTCGACGTTGAACTCCTTGAAATAACTGGTTAGTGGTTTCAATTCGTTCGCGTCATAttt > 1:894116‑M2/2‑136 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ACCAAAATTCGTTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTCGTTCACACTGACTATTCGACGTTGAACTCCTTGAAATAACTGGTTAGTGGTTTCAATTCGTTCGCGTCATATTT > TrimmedAssembly_T66_contig_6/1‑135 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |