New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	TrimmedAssembly_T66_contig_10	= 98898	0 (0.000)	84 (0.360)	32/262	2.6	55.1%	intergenic (+59/–)	rasttk_feature_annotation_tool=elepa@bvbrc/–	hypothetical protein/–
	?	TrimmedAssembly_T66_contig_2	= 81	137 (0.470)					coding (80/180 nt)	rasttk_feature_annotation_tool=elepa@bvbrc	hypothetical protein

GTTAGTATGAAAGACTGGTTGCAGATTGTCAGCCAATTAGCCAAAACGAATCATCATGACATGGAATTCAGTTAAATAATAACAAAGAACTAATCGTGCCAGTCAAGGTTCGCTTAGTCCAATAAGCTAAAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  TrimmedAssembly_T66_contig_10/98765‑98898 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAGGCTGTGACATAACTAGCCTCTGTATAAGCAAATGGGACGAGAAACCGAATTTTGGTTTCTCGTCCCATTTGCTTACG‑‑‑‑‑T  <  TrimmedAssembly_T66_contig_2/81‑1                                                                                                                                                                                                                              GTTAGTATGAAAGACTGGTTGCAGATTGTCAGCCAATTAGCCAAAACGAATCATCATGACATGGAATTCAGTTAAATAATAACAAAGAACTAATCGTGCCAGTCAAGGTTCGCTTAGTCCAATAAGCTAAAGGCGA                                                                                      >  1:979440/1‑136   TAGTATGAAAGACTTGTTGCAGATTGTCAGCCAATTAGCCAAAACGAATCATCATGACATGGAATTCAGTTAAATAATAACAAAGAACTAATCGTGCCAGTCAAGGTTCGCTTAGTCCAATAAGCTAAAGGCGAG                                                                                     <  2:2058649/135‑1   TAGTATGAAAGACTGGTTGCAGATTGTCAGCCAATTAGCCAAAACGAATCATCATGACATGGAATTCAGTTAAATAATAACAAAGAACTAATCGTGCCAGTCAAGGTTCGCTTAGTCCAATAAGCTAAAGGCGAG                                                                                     <  2:1192680/135‑1   TAGTATGAAAGACTGGTTGCAGATTGTCAGCCAATTAGCCAAAACGAATCATCATGACATGGAATTCAGTTAAATAATAACAAAGAACTAATCGTGCCAGTCAAGGTTCGCTTAGTCCAATAAGCTAAAGGCGAG                                                                                     <  1:2028011/135‑1   TAGTATGAAAGACTGGTTGCAGATTGTCAGCCAATTAGCCAAAACGAATCATCATGACATGGAATTCAGTTAAATAATAACAAAGAACTAATCGTGCCAGTCAAGGTTCGCTTAGTCCAATAAGCTAAAGGCGAG                                                                                     <  1:169603/135‑1      TATGAAAGACTGGTTGCAGATTGTCAGCCAATTAGCCAAAACGAATCATCATGACATGGAATTCAGTTAAATAATAACAAAGAACTAATCGTGCCAGTCAAGGTTCGCTTAGGCCAATAAGCTAAAGGCGAG                                                                                     >  2:1330779/1‑132       ttgtAAGACTGGTTGCAGATTGTCAGCCAATTAGCCAAAACGAATCATCATGACATGGAATTCAGTTAAATAATAACAAAGAACTAATCGTGCCAGTCAAGGTTCGCTTAGTCCAATAAGCTAAAGGCGAGGCTG                                                                                 <  2:627258/131‑1       ATGAAAGACTGGTTGCAGATTGTCAGCCAATTAGCCAAAACGAATCATCATGACATGGAATTCAGTTAAATAATAACAAAGAACTAATCGTGCCAGTCAAGGTTCGCTTAGTCCAATAAGCTAAAGGCGAGGCTG                                                                                 <  1:1903603/135‑1       ATGAAAGACTGGTTGCAGATTGTCAGCCAATTAGCCAAAACGAATCATCATGACATGGAATTCAGTTAAATAATAACAAAGAACTAATCGTGCCAGTCAAGGTTCGCTTAGTCCAATAAGCTAAAGGCGAGGCTG                                                                                 <  2:1085689/135‑1       ATGAAAGACTGGTTGCAGATTGTCAGCCAATTAGCCAAAACGAATCATCATGACATGGAATTCAGTTAAATAATAACAAAGAACTAATCGTGCCAGTCAAGGTTCGCTTAGTCCAATAAGCTAAAGGCGAGGCTG                                                                                 <  2:115078/135‑1       ATGAAAGACTGGTTGCAGATTGTCAGCCAATTAGCCAAAACGAATCATCATGACATGGAATTCAGTTAAATAATAACAAAGAACTAATCGTGCCAGTCAAGGTTCGCTTAGTCCAATAAGCTAAAGGCGAGGCTG                                                                                 <  2:1152821/135‑1       ATGAAAGACTGGTTGCAGATTGTCAGCCAATTAGCCAAAACGAATCATCATGACATGGAATTCAGTTAAATAATAACAAAGAACTAATCGTGCCAGTCAAGGTTCGCTTAGTCCAATAAGCTAAAGGCGAGGCTG                                                                                 <  2:41796/135‑1       ATGAAAGACTGGTTGCAGATTGTCAGCCAATTAGCCAAAACGAATCATCATGACATGGAATTCAGTTAAATAATAACAAAGAACTAATCGTGCCAGTCAAGGTTCGCTTAGTCCAATAAGCTAAAGGCGAGGCTG                                                                                 <  1:1561363/135‑1       ATGAAAGACTGGTTGCAGATTGTCAGCCAATTAGCCAAAACGAATCATCATGACATGGAATTCAGTTAAATAATAACAAAGAACTAATCGTGCCAGTCAAGGTTCGCTTAGTCCAATAAGCTAAAGGCGAGGCTG                                                                                 <  1:1388162/135‑1       ATGAAAGACTGGTTGAAGATTGTCAGCCAATTAGCCAAAACGATTCATCATGACATGGAATTCAGTTAAATAATAACAAAGAACTAATCGTGCCAGTCAAGGTTCGCTTAGTCCAATAAGCTAAAGGCGAGGCTG                                                                                 <  1:51113/135‑1         GAAAGACTGGTTGCAGATTGTCAGCCAATTAGCCAAAACGAATCATCATGACATGGAATTCAGTTAAATAATAACAAAGAACTAATCGTGCCAGTCAAGGTTCGCTTAGTCCAATAAGCTAAAGGCGAGGCTGTG                                                                               >  2:448423/1‑135         GAAAGACTGGTTGCAGATTGTCAGCCAATTAGCCAAAACGAATCATCATGACATGGAATTCAGTTAAATAATAACAAAGAACTAATCGTGCCAGTCAAGGTTCGCTTAGTCCAATAAGCTAAAGGCGAGGCTGTG                                                                               >  1:1010320/1‑135         GAAAGACTGGTTGCAGATTGTCAGCCAATTAGCCAAAACGAATCATCATGACATGGAATTCAGTTAAATAATAACAAAGAACTAATCGTGCCAGTCAAGGTTCGCTTAGTCCAATAAGCTAAAGGCGAGGCTGTG                                                                               >  1:1076843/1‑135         GAAAGACTGGTTGCAGATTGTCAGCCAATTAGCCAAAACGAATCATCATGACATGGAATTCAGTTAAATAATAACAAAGAACTAATCGTGCCAGTCAAGGTTCGCTTAGTCCAATAAGCTAAAGGCGAGGCTGTG                                                                               >  1:1076845/1‑135         GAAAGACTGGTTGCAGATTGTCAGCCAATTAGCCAAAACGAATCATCATGACATGGAATTCAGTTAAATAATAACAAAGAACTAATCGTGCCAGTCAAGGTTCGCTTAGTCCAATAAGCTAAAGGCGAGGCTGTG                                                                               >  1:1076846/1‑135         GAAAGACTGGTTGCAGATTGTCAGCCAATTAGCCAAAACGAATCATCATGACATGGAATTCAGTTAAATAATAACAAAGAACTAATCGTGCCAGTCAAGGTTCGCTTAGTCCAATAAGCTAAAGGCGAGGCTGTG                                                                               >  1:1148970/1‑135         GAAAGACTGGTTGCAGATTGTCAGCCAATTAGCCAAAACGAATCATCATGACATGGAATTCAGTTAAATAATAACAAAGAACTAATCGTGCCAGTCAAGGTTCGCTTAGTCCAATAAGCTAAAGGCGAGGCTGTG                                                                               >  1:1304856/1‑135         GAAAGACTGGTTGCAGATTGTCAGCCAATTAGCCAAAACGAATCATCATGACATGGAATTCAGTTAAATAATAACAAAGAACTAATCGTGCCAGTCAAGGTTCGCTTAGTCCAATAAGCTAAAGGCGAGGCTGTG                                                                               >  1:1546849/1‑135             GACTGGTTGCAGATTGTCAGCCAATTAGCCAAAACGAATCATCATGACATGGAATTCAGTTAAATAATAACAAAGAACTAATCGTGCCAGTCAAGGTTCGCTTAGTCCAATAAGCTAAAGGCGAGGCTGTGACATA                                                                          >  1:1971475/1‑136             GACTGGTTGCAGATTGTCAGCCAATTAGCCAAAACGAATCATCATGACATGGAATTCAGTTAAATAATAACAAAGAACTAATCGTGCCAGTCAAGGTTCGCTTAGTCCAATAAGCTAAAGGCGAGGCTGTGACATA                                                                          >  1:1634695/1‑136              ACTGGTTGCAGATTGTCAGCCAATTAGCCAAAACGAATCATCATGACATGGAATTCAGTTAAATAATAACAAAGAACTAATCGTGCCAGTCAAGGTTCGCTTAGTCCAATAAGCTAAAGGCGAGGCTGTGACATA                                                                          >  2:721662/1‑135              ACTGGTTGCAGATTGTCAGCCAATTAGCCAAAACGAATCATCATGACATGGAATTCAGTTAAATAATAACAAAGAACTAATCGTGCCAGTCAAGGTTCGCTTAGTCCAATAAGCTAAAGGCGAGGCTGTGACATA                                                                          >  2:354715/1‑135               CTGGTTGCAGATTGTCAGCCAATTAGCCAAAACGAATCATCATGACATGGAATTCAGTTAAATAATAACAAAGAACTAATCGTGCCAGTCAAGGTTCGCTTAGTCCAATAAGCTAAAGGCGAGGCTGTGACATAA                                                                         <  2:1575575/135‑1               CTGGTTGCAGATTGTCAGCCAATTAGCCAAAACGAATCATCATGACATGGAATTCAGTTAAATAATAACAAAGAACTAATCGTGCCAGTCAAGGTTCGCTTAGTCCAATAAGCTAAAGGCGAGGCTGTGACATA                                                                          <  2:2071900/134‑1                tgtTTGCAGATTGTCAGCCAATTAGCCAAAACGAATCATCATGACATGGAATTCAGTTAAATAATAACAAAGAACTAATCGTGCCAGTCAAGGTTCGCTTAGTCCAATAAGCTAAAGGCGAGGCTGTGACATAACT                                                                       <  2:1076846/133‑1                TGGTTGCAGATTGTCAGCCAATTAGCCAAAACGAATCATCATGACATGGAATTCAGTTAAATAATAACAAAGAACTAATCGTGCCAGTCAAGGTTCGCTTAGTCCAATAAGCTAAAGGCGAGGCTGTGACATAACT                                                                       <  1:35627/136‑1                TGGTTGCAGATTGTCAGCCAATTAGCCAAAACGAATCATCATGACATGGAATTCAGTTAAATAATAACAAAGAACTAATCGTGCCAGTCAAGGTTCGCTTAGTCCAATAAGCTAAAGGCGAGGCTGTGACATAACT                                                                       <  2:1076845/136‑1                TGGTTGCAGATTGTCAGCCAATTAGCCAAAACGAATCATCATGACATGGAATTCAGTTAAATAATAACAAAGAACTAATCGTGCCAGTCAAGGTTCGCTTAGTCCAATAAGCTAAAGGCGAGGCTGTGACATAACT                                                                       <  2:1076843/136‑1                 GGTTGCAGATTGTCAGCCAATTAGCCAAAACGAATCATCATGACATGGAATTCAGTTAAATAATAACAAAGAACTAATCGTGCCAGTCAAGGTTCGCTTAGTCCAATAAGCTAAAGGCGAGGCTGTGACATAACTA                                                                      <  2:1995109/136‑1                 GGTTGCAGATTGTCAGCCAATTAGCCAAAACGAATCATCATGACATGGAATTCAGTTAAATAATAACAAAGAACTAATCGTGCCAGTCAAGGTTCGCTTAGTCCAATAAGCTAAAGGCGAGGCTGTGACATAACTA                                                                      <  2:1692995/136‑1                 GGTTGCAGATTGTCAGCCAATTAGCCAAAACGAATCATCATGACATGGAATTCAGTTAAATAATAACAAAGAACTAATCGTGCCAGTCAAGGTTCGCTTAGTCCAATAAGCTAAAGGCGAGGCTGTGACATAACTA                                                                      <  1:301182/136‑1                 GGTTGCAGATTGTCAGCCAATTAGCCAAAACGAATCATCATGACATGGAATTCAGTTAAATAATAACAAAGAACTAATCGTGCCAGTCAAGGTTCGCTTAGTCCAATAAGCTAAAGGCGAGGCTGTGACATAACTA                                                                      <  2:1280471/136‑1                   TTGCAGATTGTCAGCCAATTAGCCAAAATGAATCATCATGACATGGAATTCAGTTACATAATAACAAAGAACTAATCGTGCCAGTCAAGGTTCGCTTAGTCCAATAAGCTAAAGGCGAGGCTGTGACATAACTAG                                                                     >  2:1347382/1‑135                   TTGCAGATTGTCAGCCAATTAGCCAAAACGAATCATCATGACATGGAATTCAGTTAAATAATAACAAAGAACTAATCGTGCCAGTCAAGGTTCGCTTAGTCCAATAAGCTAAAGGCGAGGCTGTGACATAACTAG                                                                     >  1:1018066/1‑135                   TTGCAGATTGTCAGCCAATTAGCCAAAACGAATCATCATGACATGGAATTCAGTTAAATAATAACAAAGAACTAATCGTGCCAGTCAAGGTTCGCTTAGTCCAATAAGCTAAAGGCGAGGCTGTGACATAACTAG                                                                     <  2:631463/135‑1                   TTGCAGATTGTCAGCCAATTAGCCAAAACGAATCATCATGACATGGAATTCAGTTAAATAATAACAAAGAACTAATCGTGCCAGTCAAGGTTCGCTTAGTCCAATAAGCTAAAGGCGAGGCTGTGACATAACTAG                                                                     >  2:452056/1‑135                   TTGCAGATTGTCAGCCAATTAGCCAAAACGAATCATCATGACATGGAATTCAGTTAAATAATAACAAAGAACTAATCGTGCCAGTCAAGGTTCGCTTAGTCCAATAAGCTAAAGGCGAGGCTGTGACATAACTAG                                                                     <  2:355544/135‑1                   TTGCAGATTGTCAGCCAATTAGCCAAAACGAATCATCATGACATGGAATTCAGTTAAATAATAACAAAGAACTAATCGTGCCAGTCAAGGTTCGCTTAGTCCAATAAGCTAAAGGCGAGGCTGTGACATAACTAG                                                                     >  2:2526148/1‑135                   TTGCAGATTGTCAGCCAATTAGCCAAAACGAATCATCATGACATGGAATTCAGTTAAATAATAACAAAGAACTAATCGTGCCAGTCAAGGTTCGCTTAGTCCAATAAGCTAAAGGCGAGGCTGTGACATAACTAG                                                                     >  2:1618460/1‑135                   TTGCAGATTGTCAGCCAATTAGCCAAAACGAATCATCATGACATGGAATTCAGTTAAATAATAACAAAGAACTAATCGTGCCAGTCAAGGTTCGCTTAGTCCAATAAGCTAAAGGCGAGGCTGTGACATAACTAG                                                                     <  1:729147/135‑1                   TTGCAGATTGTCAGCCAATTAGCCAAAACGAATCATCATGACATGGAATTCAGTTAAATAATAACAAAGAACTAATCGTGCCAGTCAAGGTTCGCTTAGTCCAATAAGCTAAAGGCGAGGCTGTGACATAACTAG                                                                     <  1:1466970/135‑1                   TTGCAGATTGTCAGCCAATTAGCCAAAACGAATCATCATGACATGGAATTCAGTTAAATAATAACAAAGAACTAATCGTGCCAGTCAAGGTTCGCTTAGTCCAATAAGCTAAAGGCGAGGCTGTGACATAACTAG                                                                     >  1:355544/1‑135                   TTGCAGATTGTCAGCCAATTAGCCAAAACGAATCATCATGACATGGAATTCAGTTAAATAATAACAAAGAACTAATCGTGCCAGTCAAGGTTCGCTTAGTCCAATAAGCTAAAGGCGAGGCTGTGACATAACTAG                                                                     >  1:268072/1‑135                   TTGCAGATTGTCAGCCAATTAGCCAAAACGAATCATCATGACATGGAATTCAGTTAAATAATAACAAAGAACTAATCGTGCCAGTCAAGGTTCGCTTAGTCCAATAAGCTAAAGGCGAGGCTGTGACATAACTAG                                                                     <  1:1605159/135‑1                   TTGCAGATTGTCAGCCAATTAGCCAAAACGAATCATCATGACATGGAATTCAGTTAAATAATAACAAAGAACTAATCGTGCCAGTCAAGGATCGCTTAGTCCAATAAGATAAAGGCGAGGCTGTGACATAACTAG                                                                     >  2:512663/1‑135                     GCAGATTGTCAGCCAATTAGCCAAAACGAATCATCATGACATGGAATTCAGTTAAATAATAACAAAGAACTAATCGTGCCAGTCAAGGTTCGCTTAGTCCAATAAGCTAAAGGCGAGGCTGTGACATAACTAGCC                                                                   >  1:1297632/1‑135                     GCAGATTGTCAGCCAATTAGCCAAAACGAATCATCATGACATGGAATTCAGTTAAATAATAACAAAGAACTAATCGTGCCAGTCAAGGTTCGCTTAGTCCAATAAGCTAAAGGCGAGGCTGTG                                                                               >  1:1688815/1‑123                     GCAGATTGTCAGCCAATTAGCCAAAACGAATCATCATGACATGGAATTCAGTTAAATAATAACAAAGAACTAATCGTGCCAGTCAAGGTTCGCTTAGTCCAATAAGCTAAAGGCGAGGCTGTG                                                                               <  2:1688815/123‑1                       AGATTGTCAGCCAATAAGCCAAAACGAATCATCATGACATGGAATTCAGTTAAATAATAACAAAGAACTAATCGTGCCAGTCAAGGTTCGCTTAGTCCAATAAGCTAAAGGCGAGGCTGTGACATAACTAGCC                                                                   >  1:1644682/1‑133                          TTGTCAGCCAATTAGCCAAAACGAATCATCATGACATGGAATTCAGTTAAATAATAACAAAGAACTAATCGTGCCAGTCAAGGTTCGCTTAGTCCAATAAGCTAAAGGCGAGGCTGTGACATAACTAGCCTCTG                                                               <  1:452056/134‑1                          TTGTCAGCCAATTAGCCAAAACGAATCATCATGACATGGAATTCAGTTAAATAATAACAAAGAACTAATCGTGCCAGTCAAGGTTCGCTTAGTCCAATAAGCTAAAGGCGAGGCTGTGACATAACTAGCCTCT                                                                <  2:516804/133‑1                           TGTCAGCCAATTAGCCAAAACGAATCATCATGACATGGAATTCAGTTAAATAATAACAAAGAACTAATCGTGCCAGTCAAGGTTCGCTTAGTCCAATAAGCTAAAGGCGAGGCTGTGACATAACTAGCCTCTGTAT                                                            <  2:899382/136‑1                               AGCCAATTAGCCAAAACGAATCATCATGACATGGAATTCAGTTAAATAATAACAAAGAACTAATCGTGCCAGTCAAGGTTCGCTTAGTCCAATAAGCTAAAGGCGAGGCTGTGACATAACTAGCCTCTGTATAAGC                                                        >  1:1507231/1‑136                               AGCCAATTAGCCAAAACGAATCATCATGACATGGAATTCAGTTAAATAATAACAAAGAACTAATCGTGCCAGTCAAGGTTCGCTTAGTCCAATAAGCTAAAGGCGAGGCTGTGACATAACTAGCCTCTGTATAAGC                                                        >  1:329325/1‑136                               AGCCAATTAGCCAAAACGAATCATCATGACATGGAATTCAGTTAAATAATAACAAAGAACTAATCGTGCCAGTCAAGGTTCGCTTAGTCCAATAAGCTAAAGGCGAGGCTGTGACATAACTAGCCTCTGTATAAGC                                                        >  2:551274/1‑136                               AGCCAATTAGCCAAAACGAATCATCATGACATGGAATTCAGTTAAATAATAACAAAGAACTAATCGTGCCAGTCAAGGTTCGCTTAGTCCAATAAGCTAAAGGCGAGGCTGTGACATAACTAGCCTCTGTATAAGC                                                        >  1:1183375/1‑136                               AGCCAATTAGCCAAAACGAATCATCATGACATGGAATTCAGTTAAATAATAACAAAGAACTAATCGTGCCAGTCAAGGTTCGCTTAGTCCAATAAGCTAAAGGCGAGGCTGTGACATAACT                                                                       <  2:1866829/121‑1                               AGCCAATTAGCCAAAACGAATCATCATGACATGGAATTCAGTTAAATAATAACAAAGAACTAATCGTGCCAGTCAAGGTTCGCTTAGTCCAATAAGCTAAAGGCGAGGCTGTGACATAACT                                                                       >  1:1866829/1‑121                                  CAATTAGCCAAAACGAATCATCATGACATGGAATTCAGTTAAATAATCACAAAGAACTAATCGTGCCAGTCAAGGTTCGCTTAGTCCAATAAGCTAAAGGCGAGGCTGTGACATAACTAGCCTCTGTATAAGC                                                        <  2:990448/133‑1                                        GCCAAAACGAATCATCATGACATGGAATTCAGGTAAATAATAACAAAGAACTGATCGTGCCAGTCAAGGTTCGCTTAGTCCAATAAGCTAAAGGCGAGGCTGTGACATAACTAGCCTCTGTATAAGCAAATGGGAC                                               >  2:1960561/1‑136                                          CAAAACGAATCATCATGACATGGAATTCAGTTAAATAATAACAAAGAACTAATCGTGCCAGTCAAGGTTCGCTTAGTCCAATAAGCTAAAGGCGAGGCTGTGACATAACTAGCCTCTGTATAAGCAAATGGGAC                                               <  1:2111421/134‑1                                                  ATCATCATGACATGGAATTCAGTTAAATAATAACAAAGAACTAATCGTGCCAGTCAAGGTTCGCTTAGTCCAATAAGCTAAAGGCGAGGCTGTGACATAACTAGCCTCTGTATAAGCAAATGGGACGAGAAACCGA                                     <  1:1448012/136‑1                                                              TGGAATTCAGTTAAATAATAACAAAGAACTAATCGTGCCAGTCAAGGTTCGCTTAGTCCAATAAGCTAAAGGCGAGGCTGTGACATAACTAGCCTCTGTATAAGCAAATGGGACGAGAAACCGAATTTTGGTTTCT                         <  2:1598928/136‑1                                                                  ATTCAGTTAAATAATAACAAAGAACTAATCGTGCCAGTCAAGGTTCGCTTAGTCCAATAAGCTAAAGGCGAGGCTGTGACATAACTAGCCTCTGTATAAGCAAATGGGACGAGAAACCGAATTTTGGTTTCTCGT                      >  1:1869975/1‑135                                                                   TTCAGTTAAATAATAACAAAGAACTAATCGTGCCAGTCAAGGTTCGCTTAGTCCAATAAGCTAAAGGCGAGGCTGTGACATAACTAGCCTCTGTATAAGCAAATGGGACGAGAAACCGAATTTTGGTTTCTCGTCC                    <  2:329325/136‑1                                                                          AAATAATAACAAAGAACTAATCGTGCCAGTCAAGGTTCGCTTAGTCCAATCAGCTAAAGGCGAGGCTGTGACATAACTAGCCTCTGTATAAGCAAATGGGACGAGAAACCGAATTTTGGTTTCTCGTCCCATTTGC             <  2:1483010/136‑1                                                                          AAATAATAACAAAGAACTAATCGTGCCAGTCAAGGTTCGCTTAGTCCAATAAGCTAAAGGCGAGGCTGTGACATAACTAGCCTCTGTATAAGCAAATGGGACGAGAAACCGAATTTTGGTTTCTCGTCCCATTTGC             <  2:1644682/136‑1                                                                              AATAACAAAGAACTAATCGTGCCAGTCAAGGTTCGCTTAGTCCAATAAGCTAAAGGCGAGGCTGTGACATAACTAGCCTCTGTATAAGCAAATGGGACGAGAAACCGAATTTTGGTTTCTCGTCCCATTTGCTTAC         >  1:2352067/1‑136                                                                              AATAACAAAGAACTAATCGTGCCAGTCAAGGTTCGCTTAGTCCAATAAGCTAAAGGCGAGGCTGTGACATAACTAGCCTCTGTATAAGCAAATGGGACGAGAAACCGAATTTTGGTTTCTCGTCCCATTTGCTTAC         >  1:433304/1‑136                                                                              AATAACAAAGAACTAATCGTGCCAGTCAAGGTTCGCTTAGTCCAATAAGCTAAAGGCGAGGCTGTGACATAACTAGCCTCTGTATAAGCAAATGGGACGAGAAACCGAATTTTGGTTTCTCGTCCCATTTGCTTAC         >  2:1347230/1‑136                                                                              AATAACAAAGAACTAATCGTGCCAGTCAAGGTTCGCTTAGTCCAATAAGCTAAAGGCGAGGCTGTGACATAACTAGCCTCTGTATAAGCAAATGGGACGAGAAACCGAATTTAGGTTTCTCGTCCCATTTGCTTAC         >  2:1366274/1‑136                                                                                 AACAAAGAACTAATCGTGCCAGTCAAGGTTCGCTTAGTCCAATAAGCTAAAGGCGAGGCTGTGACATAACTAGCCTCTGTATAAGCAAATGGGACGAGAAACCGAATTTTGGTTTCTCGTCCCATTTGCTTACGcc      <  2:2352067/136‑3                                                                                   CAAAGAACTAATCGTGCCAGTCAAGGTTCGCTTAGTCCAATAAGCTAAAGGCGAGGCTGTGACATAACTAGCCTCTGTATAAGCAAATGGGACGAGAAACCGAATTTTGGTTTCTCGTCCCATTTGCTTACGcctt    >  2:957178/1‑132                                                                                     AAGAACTAATCGTGCCAGTCAAGGTTCGCTTAGTCCAATAAGCTAAAGGCGAGGCTGTGACATAACTAGCCTCTGTATAAGCAAATGGGACGAGAAACCGAATTTTGGTTTCTCGTCCCATTTGCTTACGcctttg  >  2:2160165/1‑130                                                                                     AAGAACTAATCGTGCCAGTCAAGGTTCGCTTAGTCCAATAAGCTAAAGGCGAGGCTGTGACATAACTAGCCTCTGTATAAGCAAATGGGACGAGAAACCGAATTTTGGTTTCTCGTCCCATTTGCTTACGcctttg  >  1:567258/1‑130                                                                                                     AGTCAAGGTTCGCTTAGTCCAATAAGCTAAAGGCGAGGCTGTGACATAACTAG                                                                     <  2:828371/53‑1                                                                                                     AGTCAAGGTTCGCTTAGTCCAATAAGCTAAAGGCGAGGCTGTGACATAACTAG                                                                     <  2:828383/53‑1                                                                                                     AGTCAAGGTTCGCTTAGTCCAATAAGCTAAAGGCGAGGCTGTGACATAACTAG                                                                     >  1:828383/1‑53                                                                                                     AGTCAAGGTTCGCTTAGTCCAATAAGCTAAAGGCGAGGCTGTGACATAACTAG                                                                     >  1:828371/1‑53                                                                                                                                                                                                                              GTTAGTATGAAAGACTGGTTGCAGATTGTCAGCCAATTAGCCAAAACGAATCATCATGACATGGAATTCAGTTAAATAATAACAAAGAACTAATCGTGCCAGTCAAGGTTCGCTTAGTCCAATAAGCTAAAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  TrimmedAssembly_T66_contig_10/98765‑98898 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAGGCTGTGACATAACTAGCCTCTGTATAAGCAAATGGGACGAGAAACCGAATTTTGGTTTCTCGTCCCATTTGCTTACG‑‑‑‑‑T  <  TrimmedAssembly_T66_contig_2/81‑1

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.