| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | TrimmedAssembly_T66_contig_3 | = 176241 | 261 (1.020) | 319 (1.350) +CAGCAGAACT |
94/242 | 0.0 | 58.6% | coding (374/804 nt) | rasttk_feature_annotation_tool=annotate_proteins_km er_v2 | hypothetical protein |
| ? | TrimmedAssembly_T66_contig_3 | 176327 = | 228 (0.890) | coding (288/804 nt) | rasttk_feature_annotation_tool=annotate_proteins_km er_v2 | hypothetical protein | |||||
Only 100 of 367 total aligned reads displayed.
AGCACTTGATGAAGCTTGACTAGTGGTTGCAGCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > TrimmedAssembly_T66_contig_3/176108‑176241‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACTTCAAGCTTATCACCAATGAAGATTAAGTTAACATTAGCTAACTTGTTTGCCTTTTC > TrimmedAssembly_T66_contig_3/176327‑176461 |||||||||| AGCACTTGATGAAGCTTGACTAGTGGTTGCAGCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGC < 1:1896415/135‑1AGCACTTGATGAAGCTTGACTAGTGGTTGCAGCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGC < 1:1658821/135‑1 GCACTTGATGAAGCTTGACTAGTGGTTGCAGCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCA > 2:2140900/1‑135 CACTTGATGAAGCTTGACTAGTGGTTGCAGCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGC > 2:2217179/1‑136 ACTTGATGAAGCTTGACTAGTGGTTGCAGCAGAACTTGAAGCTTGGCTAGCATCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCA > 2:1270507/1‑136 GATGAAGCTTGACTAGTGGTTGCAGCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGA > 2:1819875/1‑134 GATGAAGCTTGACTAGTGGTTGCAGCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGA > 2:1687484/1‑134 ATGAAGCTTGACTAGTGGTTGCAGCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACT > 2:59877/1‑136 AAGCTTGACTAGTGGTTGCAGCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGT > 1:2420519/1‑136 AGCTTGACTAGTGGTTGCAGCAGAACATGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGT < 2:1419886/135‑1 TTGACTAGTGGTTGCAGCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGC < 2:2270357/135‑1 TGACTAGTGGTTGCAGCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTT < 2:134718/136‑1 TGACTAGTGGTTGCAGCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTT < 1:804241/136‑1 GACTAGTGGTTGCAGCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTG > 1:2515456/1‑136 CTAGTGGTTGCAGCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGC < 1:574100/136‑1 AGTGGTTGCAGCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTA > 1:782959/1‑136 GGTTGCAGCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAG < 2:345636/134‑1 TTGCAGCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTCGTT > 2:1989815/1‑134 TTGCAGCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTT > 1:1859532/1‑134 TTGCAGCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTT > 1:892835/1‑134 TTGCAGCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTT > 1:1307679/1‑134 TTGCAGCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTT > 1:756239/1‑134 TTGCAGCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTT > 1:2385598/1‑134 TGCAGCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGC < 2:1931569/135‑1 TGCAGCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGC < 2:302373/135‑1 TGCAGCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTT > 1:1055970/1‑133 AGCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGA < 1:1978858/135‑1 AGCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGA < 1:385199/135‑1 AGCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGA < 1:2455828/135‑1 AGCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGA < 2:1262177/135‑1 AGCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGA < 1:220333/135‑1 AGCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGA < 1:2112631/135‑1 GCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGAgt > 1:2270026/1‑134 GCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATT > 2:2023299/1‑136 GCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATT > 1:1404664/1‑136 GCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATT > 2:61118/1‑136 ACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGT < 1:1009774/136‑1 ACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGT < 2:1004787/133‑1 TTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGC > 1:1738495/1‑136 GCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGC > 1:2172236/1‑134 TTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACT < 2:2428474/135‑1 TTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACT < 1:1004398/135‑1 GGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGT < 1:351999/136‑1 TAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAATTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAAATAGTAGCTTGGCTAGTTGATGATTGTGGTGCAGCACTTGTAGC > 2:1081921/1‑136 TAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGC > 2:2396941/1‑136 TAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGC > 1:277099/1‑136 TGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGA > 2:2178618/1‑108 GCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGT > 1:926020/1‑136 GCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGT < 1:962452/110‑1 GTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGG < 1:449493/136‑1 TGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTT < 1:1625547/136‑1 GAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTG < 1:1928378/136‑1 GAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTG < 1:488041/136‑1 GAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTG < 2:76668/136‑1 GCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTTAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGATGATGATTGTGGTGCAGCACTTGAAGCAGCAGAAGTCGTGGTTGTT > 2:1548718/1‑136 TTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTG < 1:1373607/135‑1 TTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTG < 2:120350/135‑1 GCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTGGGCTAGCAGCTGAAGAAGTAGCAGCAGATCTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAG < 2:903813/136‑1 GAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAG > 2:805946/1‑136 GAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAG > 1:651093/1‑136 GAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACT < 2:500735/104‑1 GAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAG > 1:2323584/1‑61 GAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAG < 2:2323615/61‑1 AGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCTGCTGAAGATGTTGCAGCAGTACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACC < 1:1547125/135‑1 AGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCA > 1:474736/1‑136 AGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACC < 2:1022412/135‑1 AGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTAC < 2:558145/134‑1 GCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCAT > 1:86122/1‑136 ACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACT < 1:599323/136‑1 TGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACTTCAAG < 2:2050238/135‑1 GCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACTTCAAGCT > 2:175867/1‑136 AACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTC > 2:868098/1‑100 ACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACTTCAAGCTTATC > 1:2047500/1‑135 ACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTT < 2:1912559/82‑1 TGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACTTCAAGCTTATCACCA < 2:701859/136‑1 AAGTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACTTCAAGCTTATCACCAAT > 1:115490/1‑136 GTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACTTCAAGCTTATCACCAATGA > 2:1650806/1‑136 GTAGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACTTCAAGCTTATCACCA < 2:274932/132‑1 AGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACTTCAAGCTTATCACCAATGAAG < 2:161996/136‑1 AGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACTTCAAGCTTATCACCAATGAAG < 2:1154320/136‑1 AGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACTTCAAGCTTATCACCAATGAA < 2:964257/135‑1 AGCTTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACTTCAAGCTTATCACCAATGAA < 1:144224/135‑1 TTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACTTCAAGCTTATCACCAATGAAGATT < 2:1881802/136‑1 TTGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACTTCAAGCTTATCACCAATGAAGATT < 1:1123580/136‑1 TGGCTAGCAGCTGAAGAAGTAGCAGCAGAGCTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACTTCAAGCTTATCACCAATGAAGATTA > 1:148747/1‑136 TGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACTTCAAGCTTATCACCAATGAAGATTA > 1:2216523/1‑136 TGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACTTCAAGCTTATCACCAATGAAGATTA > 2:919967/1‑136 TGGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTG > 1:1226101/1‑94 GGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACTTCAAGCTTATCACCAATGAAGATTAA > 2:2372354/1‑136 GGCTAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTT < 1:1764256/47‑1 TAGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGT > 2:386955/1‑85 AGCAGCTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACTTCAAGCTTATCACCAATGAAGATTAAGTTA > 1:2123303/1‑136 CTGAAGAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACTTCAAGCTTATCACCAATGAAGATTAAGTTAACATT > 2:368967/1‑136 GAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACTTCAAGCTTATCACCAATGAAGATTAAGTTAACATTAGCTA > 1:308947/1‑136 GAAGTAGCAGCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACTTCAAGCTTATCACCAATGAAGATTAAGTTAACATTAGCTA > 1:537558/1‑136 GCAGAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACTTCAAGCTTATCACCAATGAAGATTAAGTTAACATTAGCTAACTTGTTT > 2:337356/1‑135 GAACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACTTCAAGCTTATCACCAATGAAGATTAAGTTAACATTAGCTAACTTGTTTGCCT > 2:472155/1‑136 ACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACTTCTAGCTTATCACCAATGAAGATTAAGTTAACATTAGCTAACTTGTTTGCCATT < 2:1226379/136‑1 ACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACTTCAAGCTTATCACCAATGAAGATTAAGTTAACATTAGCTAACTTGTTTGCCTTT < 2:1959553/136‑1 ACTAGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACTTCAAGCTTATCACCAATGAAGATTAAGTTAACATTAGCTAACTTGTTTGCCTTT < 2:1211021/136‑1 |||||||||| AGCACTTGATGAAGCTTGACTAGTGGTTGCAGCAGAACTTGAAGCTTGGCTAGCAGCTGATTGCGTTGAGCTTGCTGAAGAAGCAGCACTCGTTGCAACACTTGAAGTAGCTTGGCTAGCAGCTGAAGAAGTAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > TrimmedAssembly_T66_contig_3/176108‑176241‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AGTAGCTTGGCTAGTTGCTGATTGTGGTGCAGCACTTGTAGCAGCAGAAGTCGTGGTTGTTGTAGTAGTACCATTGACTTCAAGCTTATCACCAATGAAGATTAAGTTAACATTAGCTAACTTGTTTGCCTTTTC > TrimmedAssembly_T66_contig_3/176327‑176461 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |