| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | TrimmedAssembly_T66_contig_40 | = 631 | 0 (0.000) | 196 (0.500) | 59/262 | 0.1 | 100% | coding (1/420 nt) | rasttk_feature_annotation_tool=annotate_proteins_km er_v2 | Mobile element protein |
| ? | TrimmedAssembly_T66_contig_41 | = 437 | 0 (0.000) | coding (435/435 nt) | rasttk_feature_annotation_tool=annotate_proteins_km er_v2 | Mobile element protein | |||||
Only 100 of 196 total aligned reads displayed.
TTGGGGACCGAAGGCCCCCATAAACTTGCCAAAGGCGGTGTTTAGAGCCTTAGCCGTTCTATTAGGGGCTTTGATAGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > TrimmedAssembly_T66_contig_40/497‑631‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCCGTTGTTCGATGGAAGTCCCACTTGTAAATTTCCCACGATTTTCGCTCACTCGGTGCTGGCGGACATT < TrimmedAssembly_T66_contig_41/437‑303 TTGGGGACCGAAGGCCCCCATAAACTTGCCAAAGGCGGTGTTTAGAGCCTTAGCCGTTCTATTAGGGGCTTTGATAGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACTT < 2:639998/136‑1 GACCGAAGGCCCCCATAAACTTGCCAAAGGCGGTGTTTAGAGCCTTAGCCGTTCTATTAGGGGCTTTGATAGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACTTCGACT > 2:1306895/1‑136 GACCGAAGGCCCCCATAAACTTGCCAAAGGCGGTGTTTAGAGCCTTAGCCGTTCTATTAGGGGCTTTGATAGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACTTCGACT > 1:2143117/1‑136 GACCGAAGGCCCCCATAAACTTGCCAAAGGCGGTGTTTAGAGCCTTAGCCGTTCTATTAGGGGCTTTGATAGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACTTCGACT > 1:2084768/1‑136 GACCGAAGGCCCCCATAAACTTGCCAAAGGCGGTGTTTAGAGCCTTAGCCGTTCTATTAGGGGCTTTGATAGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACTTCGACT > 1:2221710/1‑136 ACCGAAGGCCCCCATAAACTTGCCAAAGGCGGTGTTTAGAGCCTTAGCCGTTCTATTAGGGGCTTTGATAGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACTTCGACT < 2:1052445/135‑1 ACCGAAGGCCCCCATAAACTTGCCAAAGGCGGTGTTTAGAGCCTTAGCCGTTCTATTAGGGGCTTTGATAGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACTTCGACT < 2:441284/135‑1 ACCGAAGGCCCCCATAAACTTGCCAAAGGCGGTGTTTAGAGCCTTAGCCGTTCTATTAGGGGCTTTGATAGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACTTCGACT < 1:2388093/135‑1 CGAAGGCCCCCATAAACTTGCCAAAGGCGGTGTTTAGAGCCTTAGCCGTTCTATTAGGGGCTTTGATAGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACTTCGACTAGA < 2:489555/136‑1 GAAGGCCCCCATAAACTTGCCAAAGGCGGTGTTTAGAGCCTTAGCCGTTCTATTAGGGGCTTTGATAGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACTTCGACTAGAA < 1:88605/136‑1 CCCATAAACTTGCCAAAGGCGGTGTTTAGAGCCTTAGCCGTTCTATTAGGGGCTTTGATAGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACTTCGACTAGAAAGCACCG < 2:556378/136‑1 AAACTTGCCAAAGGCGGTGTTTAGAGCCTTAGCCGTTCTATTAGGGGCTTTGATAGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACTTCGACTAGAAAGCACCGTATCT > 1:327949/1‑136 TGCCAAAGGCGGTGTTTAGAGCCTTAGCCGTTCTATTAGGGGCTTTGATAGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACTTCGACTAGAAAGCACCGTATCTACTTC < 2:1502423/136‑1 AAAGGCGGTGTTTAGAGCCTTAGCCGTTCTATTAGGGGCTTTGATAGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACTTCGACTAGAAAGCACCGTATCTACTTCCCAA > 1:1166294/1‑136 AAAGGCGGTGTTTAGAGCCTTAGCCGTTCTATTAGGGGCTTTGATAGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACTTCGACTAGAAAGCACCGTATCTACTTCCCAA > 1:2336136/1‑136 AAGGCGGTGTTTAGAGCCTTAGCCGTTCTATTAGGGGCTTTGATAGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACTTCGACTAGAAAGCACCGTATCTACTTCCCAAT > 2:2038230/1‑136 CGGTGTTTAGAGCCTTAGCCGTTCTATTAGGGGCTTTGATAGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACTTCGACTAGAAAGCACCGTATCTACTTCCCAATGAC < 1:1676527/135‑1 GTTTAGAGCCTTAGCCGTTCTATTAGGGGCTTTGATAGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACTTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAA < 2:802940/136‑1 GCCTTAGCCGTTCTATTAGGGGCTTTGATAGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACTTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAA < 1:1762097/134‑1 CTTAGCCGTTCTATTAGGGGCTTTGATAGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACTTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGT > 1:1077167/1‑136 CCGTTCTATTAGGGGCTTTGATAGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACTTCGACTAGAAAGCACCGTATCTCCTTCCCAATGACCAAAAGCTAACCGTTGATT > 2:1090148/1‑136 CCGTTCTATTAGGGGCTTTGATAGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACTTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATT > 2:2302607/1‑136 CCGTTCTATTAGGGGCTTTGATAGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACTTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATT > 1:1046552/1‑136 CCGTTCTATTAGGGGCTTTGATAGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACTTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATT > 1:226558/1‑136 CCGTTCTATTAGGGGCTTTGATAGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACTTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATT > 2:1457561/1‑136 CCGTTCTATTAGGGGCTTTGATAGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACTTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATT > 1:735308/1‑136 CCGTTCTATTAGGGGCTTTGATAGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACTTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATT > 1:2068685/1‑136 CCGTTCTATTAGGGGCTTTGATAGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACTTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATT > 2:450716/1‑136 CCGTTCTATTAGGGGCTTTGATAGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACTTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATT > 2:730242/1‑136 CCGTTCTATTAGGGGCTTTGATAGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACTTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAAACGTTGATT > 1:660134/1‑136 CCGTTCTATTAGGGGCTTTGATAGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACTTCGACT < 1:1911503/88‑1 CCGTTCTATTAGGGGCTTTGATAGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACTT > 2:37099/1‑83 CCGTTCTATTAGGGGCTTTGATAGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACTT < 1:37099/83‑1 CGTTCTATTAGGGGCTTTGATAGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGTTCGTGACTCACTTCGACTAGAAAGCACCGTATCTAATTCCCAATGACCAAAAGCTAACCGTTGAT < 1:1746528/134‑1 CGTTCTATTAGGGGCTTTGATAGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACTTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGAT < 1:1213368/134‑1 ATTAGGGGCTTTGATAGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACTTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTT > 2:313246/1‑136 ATTAGGGGCTTTGATAGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACTTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTT > 1:52016/1‑136 ATTAGGGGCTTTGATAGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACTTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTT > 1:47100/1‑136 ATTAGGGGCTTTGATAGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACTTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTT > 1:1428708/1‑136 ATTAGGGGCTTTGATAGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACTTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTT > 1:1498165/1‑136 ATTAGGGGCTTTGATAGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACTTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTT > 1:1680793/1‑136 ATTAGGGGCTTTGATAGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACTTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTT > 2:1350915/1‑136 ATTAGGGGCTTTGATAGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACTTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTT > 1:180413/1‑136 ATTAGGGGCTTTGATAGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACTTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTT > 1:2311424/1‑136 ATTAGGGGCTTTGATAGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACTTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTT > 2:2465390/1‑136 ATTAGGGGCTTTGATAGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACATCGACTAGAAATCACCGAATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTT > 2:1225967/1‑136 TTAGGGGCTTTGATAGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACTTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTG > 2:929220/1‑136 GGCTTTGATAGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACTTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGG < 2:180413/135‑1 TTTGATAGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACTTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCCGT > 1:2040908/1‑136 TTGATAGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACTTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCCGTT < 1:1330973/136‑1 GATAGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACTTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCCGTTGT > 2:457351/1‑136 GATAGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACTTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCCGTTGT > 1:503243/1‑136 GATAGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACTTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCCGTTGT > 1:2229262/1‑136 GATAGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACTTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCCGTTGT > 1:643749/1‑136 GATAGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACTTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCCGTTGT > 2:2428423/1‑136 GATAGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACTTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGAT > 2:703434/1‑116 GATAGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACTTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGAT < 1:703434/116‑1 TAGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACTTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCCGTTGTTC > 2:2178383/1‑136 TAGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACTTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCCGTTGTTC > 1:451885/1‑136 TAGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACTTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCCGTTGTTC > 1:1286400/1‑136 TAGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACTTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCCGTTGTTC > 1:962992/1‑136 TAGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACTTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCCGTTGTTC > 1:26752/1‑136 TAGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACTTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCCGTTGTTC > 1:2201384/1‑136 AGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACTTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCCGTTGTTCG < 1:1550625/136‑1 ATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACTTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAGCCGTTGATTAACAGTTGTGGGCCGTTGTGCGATGGA > 1:1029969/1‑136 ATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACTTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCCGTTGTTCGATGGA > 1:975759/1‑136 AGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACTTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCCGTTGTTCGATGGAAG < 1:2428423/136‑1 AGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGAGCGTGACTCACTTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGGTGATTAACAGTTGTTGGCCGTTGTTCGATGGAAG > 2:290165/1‑136 GGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACTTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCCGTTGTTCGATGGAAGTCCCACTT > 2:1604015/1‑136 GGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACTTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCCGTTGTTCGATGGAAGTCCCACTT > 2:1838671/1‑136 GGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACTTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCCGTTGTTCGATGGAAGTCCCACTT > 1:1991185/1‑136 GGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACTGCGACTAGAAAGCACCGTATCTACTTCCAAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCCGATGTTCGATGGAGGTCCCACTg > 2:2018352/1‑135 CGTTCTACGAATGTAACCAGACATGATCGTGACTCACTTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCCGTTGTTCGATGGAAGTCCCACTTGTAAATT > 2:1868195/1‑136 TTCTACGAATGTAACCAGACATGATCGTGACTCACTTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCCGTTGTTCGATGGAAGTCCCACTTGTAAATTT > 1:977328/1‑135 TCTACGAATGTAACCAGACATGATCGTGACTCACTTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCCGTTGTTCGATGGAAGTCCCACTTGTAAATTTC > 1:2505713/1‑135 CGAATGTAACCAGACATGATCGTGACTCACTTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCCGTTGTTCGATGGAAGTCCCACTTGTAAATTTCCCACG > 1:2257621/1‑136 CGAATGTAACCAGACATGATCGTGACTCACTTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCCGTTGTTCGATGGAAGTCCCACTTGTAAATTTCCCACG > 2:25637/1‑136 GAATGTAACCAGACATGATCGTGACTCACTTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCCGTTGTTCGATGGAAGTCCCACTTGTAAATTTCCCACGA > 2:1707229/1‑136 GAATGTAACCAGACATGATCGTGACTCACTTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAA > 2:206012/1‑75 TGTAACCAGACATGATCGTGACTCACTTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCCGTTGTTCGATGGAAGTCCCACTTGTAAATTTCCCACGATTT < 2:2168103/136‑1 GTAACCAGACATGATCGTGACTCACTTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCCGTTGTTCGATGGAAGTCCCACTTGTAAATTTCCCACGATTTT < 2:2143117/136‑1 AACCAGACATGATCGTGACTCACTTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCCGTTGTTCGATGGAAGTCCCACTTGTAAATTTCCCACGATTTTC < 1:298914/135‑1 CCAGACATGATCGTGACTCACTTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCCGTT < 2:2356938/93‑1 CAGACATGATCGTGACTCACTTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCCGTTGTTCGATGGAAGTCCCACTTGTAAATTTCCCACGATTTTCGCTC < 1:2242537/136‑1 CAGACATGATCGTGACTCACTTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCCGTTGTTCGATGGAAGTCCCACTTGTAAATTTCCCACGATTTTCGCTC < 2:891258/136‑1 CAGACATGATCGTGACTCACTTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCCGTTGTTCGATGGAAGTCCCACTTGTAAATTTCCCACGATTTTCGCTC < 2:2221710/136‑1 AGACATGATCGTGACTCACTTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCCGTTGTTCGATGGAAGTCCCACTTGTAAATTTCCCACGATTTTCGCTC > 2:715222/1‑135 CATGATCGTGACTCACTTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCCGTTGTTCGATGGAAGTCCCACTTGTAAATTTCCCACGATTTTCGCTCACTC < 1:2038229/136‑1 ATGATCGTGACTCACTTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCCGTTGTTCGATGGAAGTCCCACTTGTAAATTTCCCACGATTTTCGCTCACTCG < 1:88179/136‑1 TGATCGTGACTCACTTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCCGTTGTTCGATGGAAGTCCCACTTGTAAATTTCCCACGATTTTCGCTCACTCGG > 2:2404509/1‑136 TGATCGTGACTCACTTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCAGTTGTTCTATGGAAGTCACACTTGTAAATTTCCCACGATTTTCGATCAC > 2:1720242/1‑132 GTGACTCACTTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCCGTTGTTCGATGGAAGTCCCACTTGTAAATTTCCCACGATTTTCGCTCACTCGGTGCTG < 2:1262830/136‑1 GTGACTCACTTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCCGTTGTTCGATGGAAGTCCCACTTGTAAATTTCCCACGATTTTCGCTCACTCGGTGCTG < 2:2226987/136‑1 GACTCACTTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCCGTTGTTCGATGGAAGTCCCACTTGTAAATTTCCCACGATTTTCGCTCACTCGGTGCTGGC < 1:2501204/136‑1 GACTCACTTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCCGTTGTTCGATGGAAGTCCCACTTGTAAATTTCCCACGATTTTCGCTCACTCGGTGCTGGC > 2:672103/1‑136 CTCACTTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCCGTTGTTCGATGGAAGTCCCACTTGTAAATTTCCCACGATTTTCGCTCACTCGGTGCTGTCGG > 2:1150688/1‑136 TCACTTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCCGTTGTTCGATGGAAGTCCCACTTGTAAATTTCCCACGATTTTCGCTCACTCGGTGCTGGCGGA < 2:601386/136‑1 TCACTTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCCGTTGTTCGATGGAAGTCCCACTTGTAAATTTCCCACGATTTTCGCTCACTCGGTGCTGGCGGA < 1:2357124/136‑1 TCACTTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCCGTTGTTCGATGGAAGTCCCACTTGTAAATTTCCCACGATTTTCGCTCACTCGGTGCTGGCGG > 1:1795291/1‑135 TTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCCGTTGTTCGATGGAAGTCCCACTTGTAAATTTCCCACGATTTTCGCTCACTCGGTGCTGGCGGACATT < 2:1481707/136‑1 TTGGGGACCGAAGGCCCCCATAAACTTGCCAAAGGCGGTGTTTAGAGCCTTAGCCGTTCTATTAGGGGCTTTGATAGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > TrimmedAssembly_T66_contig_40/497‑631‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCCGTTGTTCGATGGAAGTCCCACTTGTAAATTTCCCACGATTTTCGCTCACTCGGTGCTGGCGGACATT < TrimmedAssembly_T66_contig_41/437‑303 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |