| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | TrimmedAssembly_T66_contig_11 | = 96142 | 0 (0.000) | 115 (0.730) | 34/206 | 1.3 | 74.0% | intergenic (+314/–) | rasttk_feature_annotation_tool=elepa@bvbrc/– | hypothetical protein/– |
| ? | TrimmedAssembly_T66_contig_9 | = 72 | 81 (0.460) | intergenic (–/+187) | –/rasttk_feature_annotation_tool=elepa@bvbrc | –/hypothetical protein | |||||
Only 100 of 119 total aligned reads displayed.
AGCTGGCTGCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > TrimmedAssembly_T66_contig_11/96009‑96142 | aGCTGGCTGCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCca < 2:687604‑M1/136‑3 (MQ=255)aGCTGGCTGCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCCTCGGATTTTTCca < 1:859025‑M1/136‑3 (MQ=255)aGCTGGCTGCTTTTGAACCTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGACAAATCTTCGGATTTTTCca < 1:1240059‑M1/136‑3 (MQ=255) tgctTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgt < 1:1176786‑M1/136‑10 (MQ=255) tgctTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTGTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACTAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgt > 2:218872‑M1/1‑127 (MQ=255) gctTTTGTACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGTAAAATCTTCGGTTGTTTCgagacgtgtg > 2:1171581‑M1/1‑126 (MQ=255) gctTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCctgacctgtt > 1:2530146‑M1/1‑126 (MQ=255) gctTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtt > 2:551513‑M1/1‑126 (MQ=255) gctTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtt > 2:2200068‑M1/1‑126 (MQ=255) gctTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtt > 1:2460175‑M1/1‑126 (MQ=255) gctTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtt > 2:1502255‑M1/1‑126 (MQ=255) gctTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtt > 1:2115938‑M1/1‑126 (MQ=255) gctTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtt > 1:2154711‑M1/1‑126 (MQ=255) gctTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtt > 2:2412226‑M1/1‑126 (MQ=255) gctTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtt > 2:2403642‑M1/1‑126 (MQ=255) gctTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtt > 1:2266170‑M1/1‑126 (MQ=255) gctTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtt > 1:616893‑M1/1‑126 (MQ=255) gctTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtt > 1:836398‑M1/1‑126 (MQ=255) gctTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtt > 2:681731‑M1/1‑126 (MQ=255) gctTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtt > 1:185990‑M1/1‑126 (MQ=255) gctTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtt > 1:1839636‑M1/1‑126 (MQ=255) gctTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtt > 1:1824378‑M1/1‑126 (MQ=255) gctTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtt > 1:1716422‑M1/1‑126 (MQ=255) gctTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtt > 1:530209‑M1/1‑126 (MQ=255) gctTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtt > 1:2506186‑M1/1‑126 (MQ=255) gctTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtt > 1:1335541‑M1/1‑126 (MQ=255) gctTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtt > 1:127669‑M1/1‑126 (MQ=255) gctTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtt > 2:1204072‑M1/1‑126 (MQ=255) gctTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacatgtt > 1:2374661‑M1/1‑126 (MQ=255) gctTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATATTCGGATTTTTCcagacctgtt > 1:2148287‑M1/1‑126 (MQ=255) gcgtttgaaCTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAATACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtt > 2:477113‑M1/4‑126 (MQ=255) gAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgat > 1:1416306‑M1/1‑120 (MQ=255) aaTCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaa > 1:340435‑M1/1‑111 (MQ=255) aaTCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaa > 2:1856431‑M1/1‑111 (MQ=255) aTCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaa < 1:974446‑M1/135‑26 (MQ=255) aTCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaa < 1:974469‑M1/135‑26 (MQ=255) cGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaa > 2:1749167‑M1/1‑103 (MQ=255) ttAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaaga < 2:2374661‑M1/136‑38 (MQ=255) ttAATCATGATTGTTTAATAACGATGAGTAAAAAACAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaaga < 1:2293847‑M1/136‑38 (MQ=255) tAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatcgaaaataaaaaaagag < 2:266130‑M1/136‑39 (MQ=255) tAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCACTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaaga > 2:1835610‑M1/1‑98 (MQ=255) aTGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaagagcatcg < 1:602761‑M1/136‑44 (MQ=255) aTGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaagagcatcg < 2:1561376‑M1/136‑44 (MQ=255) aTGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaagagcatcg < 2:1561129‑M1/136‑44 (MQ=255) aTGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaagagcatcg < 2:682699‑M1/136‑44 (MQ=255) aTGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaagagcatcg < 2:836398‑M1/136‑44 (MQ=255) tGATTGTTTACTAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACCGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtatttgatataattgaaaataaaaaaagagcatcgg < 2:946180‑M1/136‑45 (MQ=255) gattgattAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaagagcatcggt < 2:226774‑M1/136‑46 (MQ=255) ttGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaagagcatcgttc > 2:1421233‑M1/1‑89 (MQ=255) ttGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaagagcatcggtc > 2:689107‑M1/1‑89 (MQ=255) ttGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCAGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaagagcatcggac > 2:613162‑M1/1‑89 (MQ=255) gTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaagagcatcggtcgc > 2:1976044‑M1/1‑87 (MQ=255) gTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaagagcatcggtcgc > 2:972245‑M1/1‑87 (MQ=255) gTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaagagcatcggtcgc > 2:916709‑M1/1‑87 (MQ=255) gTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaagagcatcggtcgc > 1:2114121‑M1/1‑87 (MQ=255) ttAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaagagcatcggtcgcacc < 1:1984346‑M1/136‑52 (MQ=255) aataaCGATGATTTATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACATAACAGGTCTGGATAAATCTTCGGATTTTTCcagtcctgtttttgatattatagaaaataaaaaaagagcatcggtcgcacccg < 1:613162‑M1/136‑54 (MQ=255) aataaCGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaagagcatcggtcgcacccg < 2:2209793‑M1/136‑54 (MQ=255) aataaCGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaagagcatcggtcgcacccg < 1:736792‑M1/136‑54 (MQ=255) taaCGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaagagcatcggtcgcacccgat < 2:1141998‑M1/136‑56 (MQ=255) cGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaagagcatcggtcgcacccgatac > 2:680121‑M1/1‑78 (MQ=255) aggaataaaaaAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgttttagatataatagtaaataaaaaaagagcatcggtcgcacccgatactctacg > 2:1741181‑M1/4‑73 (MQ=255) aGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaagagcatcggtcgcacccgatactctacg > 1:605480‑M1/1‑73 (MQ=255) aGTAATAAAAAAACGAGGCTGTGACAGAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgttataatataaaataaaaaaagagcatcggtcgcacccgatactctacg > 2:285718‑M1/1‑73 (MQ=255) gTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaagagcatcggtcgcacccgatactctacg < 1:35032‑M1/135‑64 (MQ=255) taaAACAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataaaagaaaataaaaaaagagcatcggtcgcacccgatactctacgaaatt < 1:1458447‑M1/136‑69 (MQ=255) taaAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcatacctgtttttgatagaatagaaaataaaaaaagagcatcggtcgcacccgatactctacgaaaat > 1:2348460‑M1/1‑68 (MQ=255) aaaaaaGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgttttagatataatagaaaataaaaaaagagcatcggtcgcacccgatactctacgaaattat > 1:2370120‑M1/1‑65 (MQ=255) aaaaCGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCca > 2:1323708‑M1/1‑64 (MQ=255) tagagaggcTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaagagcatcggtcgcacccgatactctacgaaattatcct < 2:1619817‑M1/132‑74 (MQ=255) tagagaggcTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaagagcatcggtcgcacccgatactctacgaaattatcct < 2:1911099‑M1/132‑74 (MQ=255) aaaaGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaagagcatcggtcgcacccgatactctacgaaattatcct < 1:1883536‑M1/136‑74 (MQ=255) aaaaGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaagagcatcggtcgcacccgatactctacgaaattatcct < 1:1123112‑M1/136‑74 (MQ=255) aaaCGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaagagcatcggtcgcacccgatactctacgaaattatcct < 2:1716422‑M1/136‑74 (MQ=255) aaaCGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaagagcatcggtcgcacccgatactctacgaaattatcct < 1:368206‑M1/136‑74 (MQ=255) aagagGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTTGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaagagcatcggtcgcacccgatactctacgaaattatcctcg > 2:1412176‑M1/3‑61 (MQ=255) aagagGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaagagcatcggtcgcacccgatactctacgaaattatcctcg > 1:242539‑M1/3‑61 (MQ=255) cGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataagagaaaataaaaaaagagcatcggtcgcacccgatactctacgaaattatcctcga > 2:2137655‑M1/1‑60 (MQ=255) agaGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaagagcatcggtcgcacccgatactctacgaaattatcctcga > 1:113296‑M1/2‑60 (MQ=255) agaGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaagagcatcggtcgcacccgatactctacgaaattatcctcga > 1:2461382‑M1/2‑60 (MQ=255) agaGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaagagcatcggtcgcacccgatactctacgaaattatcctcga < 1:549952‑M1/135‑77 (MQ=255) agaGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaagagcatcggtcgcacccgatactctacgaaattatcct > 1:2188860‑M1/2‑60 (MQ=255) agaGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaagagcatcggtcgcacccgatactctacgaaattatcct < 2:2188860‑M1/132‑74 (MQ=255) gAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaagagcatcggtcgcacccgatactctacgaaattatcctcgaa < 2:2266170‑M1/136‑78 (MQ=255) gAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaagagcatcggtcgcacccgatactctacgaaattatcctcgaa > 1:141007‑M1/1‑59 (MQ=255) ggCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCca > 2:831474‑M1/1‑57 (MQ=255) ggCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCca < 1:831474‑M1/59‑3 (MQ=255) gtgACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaagagcatcggtcgcacccg > 1:1326491‑M1/1‑53 (MQ=255) ctctAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgt > 2:2106564‑M1/1‑42 (MQ=255) ctctAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgt < 1:2106564‑M1/51‑10 (MQ=255) aaacaaaacaGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaagagcatcggtcgcacccgatact > 1:174403‑M1/1‑36 (MQ=255) aaacaaaacaGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaagagcatcggtcgcacccgatact < 2:174403‑M1/94‑59 (MQ=255) aaacaaaacaGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaagagcatcggtc < 1:2223860‑M1/82‑47 (MQ=255) aaacaaaacaGGTCTGGAAAAATCTTCGGATTTTTCcagacctgt < 1:1183630‑M1/45‑10 (MQ=255) aaacaaaacaGGTCTGGAAAAATCTTCGGATTTTTCcagacctgt > 2:1183630‑M1/1‑36 (MQ=255) aaacaaaacaGGTCTGGAAAAATCTTCGGATTTTTCca < 1:991871‑M1/38‑3 (MQ=255) aaaTCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaagagcatcggtcgcacccgatactctacgaaattatcct < 1:1904613‑M1/90‑74 (MQ=255) aaaTCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaagagcatcggtcgcacccgatactctacgaaattatcct > 2:1904613‑M1/1‑17 (MQ=255) aTTTTTCcagacctgcttttgatataatagaaaataaaaaaaaaagcatcggtcgcacccgatactctacgaaatt < 1:231846‑M1/76‑70 (MQ=255) aTTTTTCcagacctgcttttgatataatagaaaataaaaaaaaaagcatcggtcgcacccgatactctacgaaatt > 2:231846‑M1/1‑7 (MQ=255) | AGCTGGCTGCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > TrimmedAssembly_T66_contig_11/96009‑96142 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |