| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | TrimmedAssembly_T66_contig_13 | = 94334 | 0 (0.000) | 211 (0.910) | 64/260 | 0.4 | 73.0% | intergenic (+21/–) | rasttk_feature_creation_tool=tRNAscan‑SE/– | tRNA‑Ala‑CGC/– |
| ? | TrimmedAssembly_T66_contig_9 | = 132 | 156 (0.700) | intergenic (–/+127) | –/rasttk_feature_annotation_tool=elepa@bvbrc | –/hypothetical protein | |||||
Only 100 of 373 total aligned reads displayed.
‑‑‑‑‑GATAATTTCGTAGAGTATCGGGTGCGACCGATGCTTTTTTTTTTATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGCTTTGTTTCTAGAGACTTATGTCACAGCCTCTTCGTATTTAACAACTGCATTGCAATTGCTAGTTGACCTTGCATCAATCAACTATGGTGACGCGATGAAATTCCTTCTGACTCAGCTCATCGCAAACAATTACACACGATTAGCCCCATCATCCGTCCTACTT > TrimmedAssembly_T66_contig_9/1‑264 | tcgaggATAATTTCGTAGAGTATCGGGTGCGACCGATGC‑TTTTTTTTTATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGCTTTGTTTCTAGAGACTTATGTCACAGCctct < 1:516989/131‑1 (MQ=255) aggATAATTTCGTAGAGTATCGGGTGCGACCGATGCTTTTTTTTTTATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGCTTTGTTTCTAGAGACTTATGTCACAGCCTCTTc > 1:2343596/3‑136 (MQ=255) aggATAATTTCGTAGAGTATCGGGTGCGACCGATGCTTTTTTTTTTATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGCTTTGTTTCTAGAGACTTATGTCACAGCCTCTTc > 1:726489/3‑136 (MQ=255) tAATTTCGTAGAGTATCGGGTGCGACCGATGCTCTTTTTTT‑ATTTTCTATTATATCAAAAACAGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGTTTTGTTTCTAGAGACTTATGTCACAGCCTCTtgttttt > 1:121170‑M2/1‑129 (MQ=255) tAATTTCGTAGAGTATCGGGTGCGACCGATGCTCTTTTTTT‑ATTTTCTATTATATCAAAAACAGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGTTTTGTTTCTAGAGACTTATGTCACAGCCTCTtgttttt > 1:1445366‑M2/1‑129 (MQ=255) tAATTTCGTAGAGTATCGGGTGCGACCGATGC‑TCTTTTTTTATTTTCTATTATATCAAAAACAGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGTTTTGTTTCTAGAGACTTATGTCACAGCCTCttttttg < 2:33590/135‑6 (MQ=25) aaTTTCGTAGAGTATCGGGTGCGACCGATGCTTTTTTTTTTATTTTCGATTATATCAAAAGCAGGTCTGGAAAAATCCGAAGATTTTTCAAGACCTGCTTTGTTTCTAGAGACGTATGTCACAGCAGCTTCGTAtt > 1:315867/1‑136 (MQ=38) cGTAGAGTATCGGGAGCGACCGATGCTCTTTTATTC‑TTTTCTCTTATATCAAAAACAGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGTTTTGTTTCTAGAGACTTATGTCACAGCCTCTtgtttttgatgtc > 2:963963‑M2/1‑123 (MQ=255) tAGAGTATCGGGTGCGACCGATGCTCTTTTTTT‑ATTTTCTATTATATCAAAAACAGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGTTTTGTTTCTAGAGACTTATGTCACAGCCTCTtgtttttgatgtcta < 1:349551‑M2/136‑16 (MQ=255) agagTATCGGGTGCGACCGATGCTTTTTTTTTTATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGCTTTGTTTCTAGAGACTTATGTCACAGCCTCTTCGTATTTAACAACt < 1:1365915/136‑1 (MQ=255) agagTATCGGGTGCGACCGATGCTTTTTTTTTTATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGCTTTGTTTCTAGAGACTTATGTCACAGCCTCTTCGTATTTAACAACt < 1:2278992/136‑1 (MQ=255) agTATCGGGTGCGACCGATGCTCTTTTTTT‑ATTTTCTATTATATCAAAAACAGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGTTTTGTTTCTAGAGACTTATGTCACAGCCTCTtgtgtttgatgtctatta < 2:670367‑M2/136‑19 (MQ=255) cGGGTGCGACCGATGCTTTTTTTTTTATTTTCTATTATATCAAATGCAGGTCTTGAAAAATCCTAAGATTTTTCCAGACCTGCTTTATTTCTAGAGACTTATGTCACAGCCTCTTCGTATTTAACAACTGCATTGc > 2:432893/1‑136 (MQ=255) cGGGTGCGACCGATGCTTTTTTTTTTATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGCTTTGTTTCTAGAGACTTATGTCACAGCCTCTTCGTATTTAACAACTGCATTGc > 1:415451/1‑136 (MQ=255) cGGGTGCGACCGATGCTCTTTTTTT‑ATTTTCTATTATATCAAAAACAGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGTTTTGTTTCTAGAGACTTATGTCACAGCCTCTtgtttttgatgtctattaaaatg < 2:1351670‑M2/136‑24 (MQ=255) gCGACCGATGCTCTTTTTTT‑ATTTTCTATTATATCAAAAACAGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGTTTTGTTTCTAGAGACTTATGTCACAGCCTCTtgtttttgatgtctattaaaatggaccc > 1:1724407‑M2/1‑108 (MQ=255) gCGACCGATGCTCTTTTTTT‑ATTTTCTATTATATCAAAAACAGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGTTTTGTTTCTAGAGACTTATGTCACAGCCTCTtgtttttgatgtctattaaaatggaccc > 2:398986‑M2/1‑108 (MQ=255) gACCGATGCTTTTTTTTTTATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGCTTTGTTTCTAGAGACTTATGTCACAGCCTCTTCGTATTTAACAACTGCATTGCAATTGCt < 1:1223535/136‑1 (MQ=255) gACCGATGCTTTTTTTTTTATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGCTTTGTTTCTAGAGACTTATGTCACAGCCTCTTCGTATTTAACAACTGCATTGCAATTGCt < 2:2210238/136‑1 (MQ=255) gACCGATGCTTTTTTTTTTATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGCTTTGTTTCTAGAGACTTATGTCACAGCCTCTTCGTATTTAACAACTGCATTGCAATTGCt < 2:854387/136‑1 (MQ=255) aCCGATGCTTTTTTTTTTATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGCTTTGTTTCTAGAGACTTATGTCACAGCCTCTTCGTATTTAACAACTGCATTGCAATTGCTa > 2:509087/1‑136 (MQ=255) aCCGATGCTCTTTTTTT‑ATTTTCTATTATATCAAAAACAGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGTTTTGTTTCTAGAGACTTATGTCACAGCCTCTtgtttttgatgtctattaaaatggacccta < 1:2132458‑M2/135‑31 (MQ=255) aCCGATGCTCTTTTTTT‑ATTTTCTATTATATCAAAAACAGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGTTTTGTTTCTAGAGACTTATGTCACAGCCTCTtgtttttgatgtctattaaaatggacccta < 2:1911046‑M2/135‑31 (MQ=255) cGATGCTTTTTTTTTTATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGCTTTGTTTCTAGAGACTTATGTCACAGCCTCTTCGTATTTAACAACTGCATTGCAATTGCTAGt > 1:1931183/1‑136 (MQ=255) cGATGCTCTTTTTTT‑ATTTTCTATTATATCAAAAACAGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGTTTTGTTTCTAGAGACTTATGTCACAGCCTCTtgtttttgatgtctattaaaatggaccctaccg < 1:1092872‑M2/136‑34 (MQ=255) cGATGCTCTTTTTTT‑ATTTTCTATTATATCAAAAACAGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGTTTTGTTTCTAGAGACTTATGTCACAGCCTCTtgtttttgatgtctattaaaatggaccctaccg < 1:2397412‑M2/136‑34 (MQ=255) tGCTTTTTTTTTTATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGCTTTGTTTCTAGAGACTTATGTCACAGCCTCTTCGTATTTAACAACTGCATTGCAATTGCTAGTTg < 2:415451/135‑1 (MQ=255) ttttttATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGCTTTGTTTCTAGAGACTTATGTCACAGCCTCTTCGTATTTAACAACTGCATTGCAATTGCTAGTTGACCTTGCa < 1:2202162/136‑1 (MQ=255) ttttttATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGCTTTGTTTCTAGAGACTTATGTCACAGCCTCTTCGTATTTAACAACTGCATTGCAATTGCTAGTTGACCTTGCa < 1:477271/136‑1 (MQ=255) ttttttATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGCTTTGTTTCTAGAGACTTATGTCACAGCCTCTTCGTATTTAACAACTGCATTGCAATTGCTAGTTGACCTTGCa < 1:1157006/136‑1 (MQ=255) tttttATTTTCTATTATATCAAAAGCAGGTCGGGAAAAATCCGAAGATTTTTCCAGACCTGCTTTGTTTCTAGAGACTTATGTCACAGCCTCTTCGTATTTAACAACTGCATTGCAATTGCTAGTTGACCTTGCat < 1:1607903/136‑1 (MQ=255) ttATTTTCTATTATATCAAAAACAGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGTTTTGTTTCTAGAGACTTATGTCACAGCCTCTtgtttttgatgtctattaaaatggaccctaccggatttgaaccgac > 1:1009786‑M2/1‑90 (MQ=255) ttATTTTCTATTATATCAAAAACAGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGTTTTGTTTCTAGAGACTTATGTCACAGCCTCTtgtttttgatgtctattaaaatggaccctaccggatttgaaccgac < 2:231538‑M2/136‑47 (MQ=255) atatCAAAAGCAGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGCTTTGTTTCTAGAGACTTATGTCACAGCCTCTTCGTATTTAACAACTGCATTGCAATTGCTAGTTGCCCTTGCATCAATCAACTATGGTg < 2:539428/136‑1 (MQ=255) atatCAAAAGCAGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGCTTTGTTTCTAGAGACTTATGTCACAGCCTCTTCGTATTTAACAACTGCATTGCAATTGCTAGTTGACCTTGCATCAATCAACTATGGTg < 2:1139699/136‑1 (MQ=255) cAAAAGCAGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGCTTTGTTTCTAGAGACTTATGTCACAGCCTCTTCGTATTTAACAACTGCATTGCAATTGCTAGTTGACCTTGCATCAATCAACTATGGTGAcgc < 1:2241742/136‑1 (MQ=255) acaGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGTTTTGTTTCTAGAGACTTATGTCACCGCCTCTtgtttttgatgtctattaaaatggaccctaccggatttgaaccgacgacctcctgcatgcgaagcag < 1:1875591‑M2/135‑68 (MQ=255) acaGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGTTTTGTTTCTAGAGACTTATGTCACAGCCTCTtgtttttgatgtctattaaaatggaccctaccggatttgaaccgacgacctcctgcatgcgaagcag < 2:2243081‑M2/135‑68 (MQ=255) tCTGGAAAAATCCGAAGATTTTTCCAGACCTGTTTTGTTTCTAGAGACTTATGTCACAGCCTCTtgtttttgatgtctattaaaatggaccctaccggatttgaaacgacgacctcctgcatgcgaagcaggcgc > 2:2495250‑M2/1‑64 (MQ=255) cTGGAAAAATCCGAAGTTTTTTCCAGACCTGTTTTGTTTCTGGAGACTTATGTCACAGCCTCTtggtgttgatgtctctttaaatggacgctacgggatttgaaccgacgacctcctgcatgcgaagcaggcgg < 2:2130650‑M2/134‑72 (MQ=255) tGGAAAAATCCGAAGATTTTTCCAGACCTGTTTTGTTTCTAGAGACTTATGTCACAGCCTCTtgtttttgatgtctattaaaatggaccctaccggatttgaaccgacgacctcctgcatgcgaagcaggcgctc < 2:1202317‑M2/135‑74 (MQ=255) aaaaaTCCGAAGATTTTTCCAGACCTGTTTTGTTTCTAGAGACTTATGTCACAGCCTCTtgtttttgatgtctattaaaatggaccctaccggatttgaaccgacgacctcctgcatgcgaagcaggcgctctcc > 2:583698‑M2/1‑59 (MQ=255) aaaaTCCGAAGATTTTTCCAGACCTGTTTTGTTTCTAGAGACTTATGTCACAGCCTCTtgtttttgatgtctattaaaatggaccctaccggatttgaaccgacgacctcctgcatgcgaagcaggcgctctccc > 1:2516650‑M2/1‑58 (MQ=255) aaaaTCAGAACATTTTTCCAGACCTTTTTTGTTTCTAGAGACTTATGTCTCAGCCTCTtgtttttgatgtctattaaaatggaccctaccggatttgaacagacgtcctactgcatgcgaagcaggcgctctccca > 1:309292‑M2/1‑58 (MQ=255) ccGAAGATTTTTCCAGACCTGTTTTGTTTCTAGAGACTTATGTCACAGCCTCTtgtttttgatgtctattaaaatggaccctaccggatttgaaccgacgacctcctgcatgcgaagcaggcgctctcccaactga > 1:1352845‑M2/1‑53 (MQ=255) cGAAGATTTTTCCAGACCTGTTTTGTTTCTAGAGACTTATGTCACAGCCTCTtgtttttgatgtctattaaaatggaccctaccggatttgaaccgacgacctcctgcatgcgaagcaggcgctctcccaactga < 2:1266898‑M2/135‑84 (MQ=255) cGAAGATTTTTCCAGACCTGCTTTGTTTCTAGAGACTTATGTCACAGCCTCTTCGTATTTAACAACTGCATTGCAATTGCTAGTTGACCTTGCATCAATCAACTATGGTGACGCGATGAAATTCCTTCTGACTCa > 2:1957919/1‑135 (MQ=255) cGAAGATTTTTCCAGACCTGCTTTGTTTCTAGAGACTTATGTCACAGCCTCTTCGTATTTAACAACTGCATTGCAATTGCTAGTTGACCTTGCATCAATCAACTATGGTGACGCGATGAAATTCCTTCTGACTCa > 1:1600355/1‑135 (MQ=255) gAAGATTTTTCCAGACCTGTTTTGTTTCTAGAGTCTTATGTCACAGCCTCTtgtttttgatgtctattaaaatggaccctaccggatttgaaccgactacctcctgcattcgaagcaggcgctctcccaactgagc > 2:1612981‑M2/1‑51 (MQ=255) gAAGATTTTTCCAGACCTGTTTTGTTTCTAGAGACTTATGTCACAGCCTCTtgtttttgatgtctattaaaatggaccctaccggatttgaaccgacgacctcctgcatgcgaagcaggcgctctcccaactgagc > 2:2346003‑M2/1‑51 (MQ=255) gAAGATTTTTCCAGACCTGTTTTGTTTCTAGAGACTTATGTCACAGCCTCTtgtttttgatgtctattaaaatggaccctaccggatttgaaccgacgacctcctgcatgcgaagcaggcgctctcccaactgagc > 1:1700205‑M2/1‑51 (MQ=255) tttttCCAGACCTGCTTTGTTTCTAGAGACTTATGTCACAGCCTCTTCGTATTTAACAACTGCATTGCAATTGCTAGTTGACCTTGCATCAATCAACTATGGTGACGCGATGAAATTCCTTCTGACTCAGCTCATc < 2:1813633/136‑1 (MQ=255) tttttCCAGACCTGCTTTGTTTCTAGAGACTTATGTCACAGCCTCTTCGTATTTAACAACTGCATTGCAATTGCTAGTTGACCTTGCATCAATCAACTATGGTGACGCGATGAAATTCCTTCTGACTCAGCTCATc < 2:1699693/136‑1 (MQ=255) tttCCAGACCTGCATTGTTTCTAGAGACTTATGTCACAGCCTCTTCGTATTTAACAACTGCATTGCAATTGCTAGTTGACCTTGCATCAATCAACTATGGTGACGCGATGAAATTCCTTCTGACTCAGCTCATCGc < 2:2451673/136‑1 (MQ=255) ccAGACCTGTTTTGTTTCTAGAGACTTATGTCACAGCCTCTtgtttttgatgtctattaaaatggtccctaccggatttgaaccgacgacctcctgcatgcgaagcaggcgctctcccaactgagctaagggccca > 1:27299‑M2/1‑41 (MQ=255) cAGACCTGTTTTGTTTCTAGAGACTTATGTCACAGCCTCTtgtttttgatgtctattaaaatggaccctaccggatttgaaccgacgacctcctgcatgcgaagcaggcgctctcccaactgagctaagggcccaa > 2:476965‑M2/1‑40 (MQ=255) ccTGCTTTGTTTCTAGAGACTTATGTCACAGCCTCTTCGTATTTAACAACTGCATTGCAATTGCTAGTTGACCTTGCATCAATCAACTATGGTGACGCGATGAAATTCCTTCTGACTCAGCTCATCGCAAACAAtt < 2:315867/136‑1 (MQ=255) ccTGCTTTGTTTCTAGAGACTTATGTCACAGCCTCTTCGTATTTAACAACTGCATTGCAATTGCTAGTTGACCTTGCATCAATCAACTATGGTGACGCGATGAAATTCCTTCTGACTCAGCTCATCGCAAACAAtt < 1:841746/136‑1 (MQ=255) ccTGCTTTGTTTCTAGAGACTTATGTCACAGCCTCTTCGTATTTAACAACTGCATTGCAATTGCTAGTTGACCTTGCATCAATCAACTATGGTGACGCGATGAAATTCCTTCTGACTCAGCTCATCGCAAACAAtt < 1:2419141/136‑1 (MQ=255) ccTGCTTTGTTTCTAGAGACTTATGTCACAGCCTCTTCGTATTTAACAACTGCATTGCAATTGCTAGTTGACCTTGCATCAATCAACTATGGTGACGCGATGAAATTCCTTCTGACTCAGCTCATCGCAAACAAtt < 1:537065/136‑1 (MQ=255) cTGCTTTGTTTCTAGAGACTTATGTCACAGCCTCTTCGTATTTAACAACTGCATTGCAATTGCTAGTTGACCTTGCATCAATCAACTATGGTGACGCGATGAAATTCCTTCTGACTCAGCTCATCGCAAACAATTa < 2:743829/136‑1 (MQ=255) gtattgttTCTAGAGACTTATGTCACAGCCTCTtgtttttgatgtctattaaaatggaccctaccggatttgaaccgacgacctcctgcatgcgaagcaggcgctctcccaactgagctaagggcccaatacactt > 1:859537‑M2/4‑33 (MQ=255) tGTTTCTAGAGACTTATGTCACAGCCTCTtgtttttgatgtctattaaaatggaccctaccggatttgaaccgacgacctcctgcatgcgaagcaggcgctctcccaactgagctaagggcccaatacacttttag < 1:67225‑M2/136‑108 (MQ=255) tGTTTCTAGAGACTTATGTCACAGCCTCTTCGTATTTAACAACTGCATTGCAATTGCTAGTTGACCTTGCATCAATCAACTATGGTGACGCGATGAAATTCCTTCTGACTCAGCTCATCGCAAACAATTACACACg > 2:152776/1‑136 (MQ=255) gTTTCTAGAGACTTATGTCACAGCCTCTtgtttttgatgtctattaaaatggaccctaccggatttgaaccgacgacctcctgcatgcgaagcaggcgctctcccaactgagctaagggcccaatacacttttagt > 2:1395394‑M2/1‑28 (MQ=255) gTTTCTAGAGACTTATGTCACAGCCTCTtgtttttgatgtctattaaaatggaacctaccggttttgaacctaagacctactgcatgcgaatcaggcgctctcactactgagcttagggcccaatacacttttagt > 2:1065302‑M2/1‑28 (MQ=255) cTAGAGACTTATGTCACAGCCTCTtgtttttgatgtctattaaaatggaccctaccggatttgaaccgacgacctcctgcatgcgaagcaggcgctctcccaactgagctaagggcccaatacacttttagtata < 1:1646754‑M2/135‑112 (MQ=255) cTAGAGACTTATGTCACAGCCTCTtgtttttgatgtctattaaaatggaccctaccggatttgaaccgacgacctcctgcatgcgaagcaggcgctctcccaactgagctaagggcccaatacacttttagtata < 1:1792871‑M2/135‑112 (MQ=255) cTAGAGACTTATGTCACAGCCTCTTCGTATTTAACAACTGCATTGCAATTGCTAGTTGACCTTGCATCAATCAACTATGGTGACGCGATGAAATTCCTTCTGACTCAGCTCATCGCAAACAATTACACACGATTa > 1:488820/1‑135 (MQ=255) agagACTTATGTCACAGCCTCTtgtttttgatgtctattaaaatggaccctaccggatttgaaccgacgacctcctgcatgcgaagcaggcgctctcccaactgagc < 1:1027116‑M2/107‑86 (MQ=255) agagACTTATGTCACAGCCTCTtgtttttgatgtctattaaaatggaccctaccggatttgaaccgacgacctcctgcatgcgaagcaggcgctctcccaactgagc > 2:1027116‑M2/1‑22 (MQ=255) agagACTTATGTCACAGCCTCTTCGTATTTAACAACTGCATTGCAATTGCTAGTTGACCTTGCATCAATCAACTATGGTGACGCGATGAAATTCCTTCTGACTCAGCTCATCGCAAACAATTACACACGATTAGc > 1:1501229/1‑135 (MQ=255) gaCTTATTTCACAGCCTCTtttttttgaggtctattaaaatggaccctaccggatttgaaccgacgacctcctgcattccaagcaggcgctctcccaacttatctaagggcacaatacacatttattataccg > 2:786188‑M2/1‑19 (MQ=255) gaCTTATGTCACAGCCTCTtgtttttgatgtctattaaaatggaccctaccggatttgaaccgacgacctcctgcatgcgaagcaggcgctctcccaactgagctaagggcccaatacacttttagtataccgcaa < 1:2440688‑M2/136‑118 (MQ=255) gaCTTATGTCACAGCCTCTtgtttttgatgtctattaaaatggaccctaccggatttgaaccgacgacctcctgcatgcgaagcaggcgctctcccaactgagctaagggcccaatacacttttagtataccgcaa < 1:563997‑M2/136‑118 (MQ=255) gaCTTATGTCACAGCCTCTTCGTATTTAACAACTGCATTGCAATTGCTAGTTGACCTTGCATCAATCAACTATGGTGACGCGATGAAATTCCTTCTGACTCAGCTCATCGCAAACAATTACACACGATTAGCCCca > 1:1462178/1‑136 (MQ=255) gaCTTATGTCACAGCCTCTTCGTATTTAACAACTGCATTGCAATTGCTAGTTGACCTTGCATCAATCAACTATGGTGACGCGATGAAATTCCTTCTGACTCAGCTCATCGCAAACAATTACACACGATTAGCCCca > 2:1447547/1‑136 (MQ=255) gaCTTATGTCACAGCCTCTTCGTATTTAACAACTGCATTGCAATTGCTAGTTGACCTTGCATCAATCAACTATGGTGACGCGATGAAATTCCTTCTGACTCAGCTCATCGCAAACAATTACACACGATTAGCCCca > 2:1652993/1‑136 (MQ=255) tATGTCACAGCCTCTTCGTATTTAACAACTGCATTGCAATTGCTAGTTGACCTTGCATCAATCAACTATGGTGACGCGATGAAATTCCTTCTGACTCAGCTCATCGCAAACAATTACACACGATTAGCCCcatcat < 2:149149/136‑1 (MQ=255) aTGTCACAGCCTCTtgtttttgatgtctattaaaatggaccctaccggatttgaaccgacgacctcctgcatgcgaagcaggcgctctcccaactgagctaagggcccaatacacttttagtataccgcaaaat < 1:1848667‑M2/134‑121 (MQ=255) tGTCACAGCCTCTTCGTATTTAACAACTGCATTGCAATTGCTAGTTGACCTTGCATCAATCAACTATGGTGACGCGATGAAATTCCTTCTGACTCAGCTCATCGCAAACAATTACACACGATTAGCCCCATCATcc < 2:1775488/136‑1 (MQ=255) acaGCCTCTtgtttttgatgtctattaaaatggaccctaccggatttgaaccgacgacctcctgcatgcgaagcaggcgctctcccaactgagctaagggcccaatacacttttagtataccgcaaaatgctagtc > 2:2059691‑M2/1‑9 (MQ=255) acaGCCTCTtgtttttgatgtctattaaaatggaccctaccggatttgaaccgacgacctcctgcatgcgaagcaggcgctctcccaactgagctaagggcccaatacacttttagtataccgcaaaatgctagtc > 2:2420541‑M2/1‑9 (MQ=255) acaGCCTCTtgtttttgatgtctattaaaatggaccctaccggatttgaaccgacgacctcctgcatgcgaagcaggcgctctcccaactgagctaagggcccaatacacttttagtataccgcaaaatgctagtc > 1:990602‑M2/1‑9 (MQ=255) acaGCCTCTtgtttttgatgtctattaaaatggaccctaccggatttgaaccgacgacctcctgcatgcgaagcaggcgctctcccaactgagctaagggcccaatacacttttagtataccgcaaaatgctagtc > 1:1633276‑M2/1‑9 (MQ=255) acaGCCTCTtgtttttgatgtctattaaaatggaccctaccggatttgaaccgacgacctcctgcatgcgaagcaggcgctctcccaactgagctaagggcccaatacacttttagtataccgcaaaatgctagtc > 1:1551244‑M2/1‑9 (MQ=255) acaGCCTCTtgtttttgatgtctattaaaatggaccctaccggatttgaaccgacgacctcctgcatgcgaagcaggcgctctcccaactgagctaagggcccaatacacttttagtataccgcaaaatgctagtc > 2:1848729‑M2/1‑9 (MQ=255) acaGCCTCTtgtttttgaagtctattaaaatggaccctaccggatttgaaccgacgacctcctgcatgcgaagcaggcgctctcccaactgagctaagggcccaatacacttttagtataccgcaaaatgctagtc > 1:2050415‑M2/1‑9 (MQ=255) acaGCCTCTTCGTATTTAACAACTGCATTGCAATTGCTAGTTGACCTTGCATCAATCAACTATGGTGACGCGATGAAATTCCTTCTGACTCAGCTCATCGCAAACAATTACACACGATTAGCCCCATCATCCGTcc < 2:907075/136‑1 (MQ=255) gCCTCTTCGTATTTAACAACTGCATTGCAATTGCTAGTTGACCTTGCATCAATCAACTATGGTGACGCGATGAAATTCCTTCTGACTCAGCTCATCGCAAACAATTACACACGATTAGCCCCATCATCCGTCCt > 1:782653/1‑134 (MQ=255) ccTCTtgtttttgatttctattaaaatggaccctaccggatttgaaccgacgacctcctgcatgcga > 2:1294343‑M2/1‑5 (MQ=255) ccTCTtgtttttgatttctattaaaatggaccctaccggatttgaaccgacgacctcctgcatgcga < 1:1294343‑M2/67‑63 (MQ=255) ccTCTtgtttttgatgtctattaaaatggaccctaccggatttgaaccgacgacctcctgcatgcgaagcaggcgctctcccaactgagctaagggcccaatacacttttagtataccgcaaaatgctagtcgtgc < 1:2008003‑M2/136‑132 (MQ=255) ccTCTtgtttttgatgtctattaaaatggaccctaccggatttgaaccgacgacctcctgcatgcgaagcaggcgctctcccaactgagctaagggcccaatacacttttagtataccgcaaaatgctagtcgtgc < 1:915166‑M2/136‑132 (MQ=255) ccTCTtgtttttgatgtctattaaaatggaccctaccggatttgaaccgacgacctcctgcatgcgaagcaggcgctctcccaactgagctaagggcccaatacacttttagtataccgcaaaatgctagtcgtgc < 1:903705‑M2/136‑132 (MQ=255) ccTCTtgtttttgatgtctattaaaatggaccctaccggatttgaaccgacgacctcctgcatgcgaagcaggcgctctcacaactgagctaagggcccaaaacacatttagtataccgcaaaatgctagacgtgc < 1:1119624‑M2/136‑132 (MQ=255) ccTCTtgtttttgatgtctattaaaatggaccctaccggatttgaacc > 1:1305962‑M2/1‑5 (MQ=255) ccTCTtgtttttgatgtctattaaaatggaccctaccggatttgaacc < 2:1305962‑M2/48‑44 (MQ=255) ccTCTTCGTATTTAACAACTGCATTGCAATTGCTAGTTGACCTTGCATCAATCAACTATGGTGACGCGATGAAATTCCTTCTGACTCAGCTCATCGCAAACAATTACACACGATTAGCCCCATCATCCGTCCTACt > 1:2103583/1‑136 (MQ=255) ctctTCGTATTTAACAACTGCATTGCAATTGCTAGTTGACCTTGCATCAATCAACTATGGTGACGCGATGAAATTCCTTCTGACTCAGCTCATCGCAAACAATTACACACGATTAGCCCCATCATCCGTCCTACtt > 2:1981149/1‑136 (MQ=255) | ‑‑‑‑‑GATAATTTCGTAGAGTATCGGGTGCGACCGATGCTTTTTTTTTTATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGCTTTGTTTCTAGAGACTTATGTCACAGCCTCTTCGTATTTAACAACTGCATTGCAATTGCTAGTTGACCTTGCATCAATCAACTATGGTGACGCGATGAAATTCCTTCTGACTCAGCTCATCGCAAACAATTACACACGATTAGCCCCATCATCCGTCCTACTT > TrimmedAssembly_T66_contig_9/1‑264 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |