| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | TrimmedAssembly_T66_contig_1 | 1 = | 0 (0.000) | 169 (0.620) | 58/262 | 0.2 | 100% | intergenic (–/‑2) | –/rasttk_feature_annotation_tool=elepa@bvbrc | –/hypothetical protein |
| ? | TrimmedAssembly_T66_contig_35 | 1 = | 0 (0.000) | intergenic (–/‑99) | –/rasttk_feature_annotation_tool=annotate_proteins_km er_v2 | –/Mobile element protein | |||||
Only 100 of 395 total aligned reads displayed.
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCGGTATGAGCTATAAACATCTTACTATAAAAGAACGTGAAA > TrimmedAssembly_T66_contig_35/1‑136 | agttatcggtttcgattaagtccaatgcgtccaagatacggcctgccggaatgaacgattccgtgaaggtctgctttttaccatcaataagtaattccatctttagtggtgtactcatagttttttccctccGGCg > 2:1515032‑M2/133‑136 (MQ=255) tatcggtttcgattaagtccaatgcgtccaagatacggcctgccggaatgaacgattccgtgaaggtctgctttttaccatcaataagtaattccatctttagtggtgtactcatagttttttccctccGGCGAAt > 2:2257140‑M2/130‑136 (MQ=255) ggtttcgattaagtccaatgcgtccaagatacggcctgccggaatgaacgattccgtgaaggtctgctttttaccatcaataagtaattccatctttagtggtgtactcatagttttttccctccGGCGAATTTAc < 1:2414754‑M2/11‑1 (MQ=255) aataatctctttcattcatagactcccccaagtctgatgaatggggttcatcaaagcccccactttgatgtttcctactccttgaccactacatccgctgatgtggtggcatttttattgccgGGCGAATTTACaa < 2:1860671‑M2/13‑1 (MQ=255) aataatcactttcattcatagactcccccaagtctgatgaatggggttcatcaaagcccccactttgatgtttcctactccttgaccactacatccgctgatgtggtggcttttttattgccgGGCGACTTTACaa > 2:2398054‑M2/124‑136 (MQ=255) aataatcactttcattcatagactcccccaagtctgatgaatggggttcatcaaagcccccactttgatgtttcctactccttgaccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACaa > 1:1166760‑M2/124‑136 (MQ=255) aataatcactttcattcatagactcccccaagtctgatgaatggggttcatcaaagcccccactttgatgtttcctactccttgaccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACaa < 2:1910545‑M2/13‑1 (MQ=255) ataatcactttcattcatagactcccccaagtctgatgaatggggttcatcaaagcccccactttgatgtttcctactccttgaccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAAt > 2:2022191‑M2/123‑136 (MQ=255) ataatcactttcattcatagactcccccaagtctgatgaatggggttcatcaaagcccccactttgatgtttcctactccttgaccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAAt > 1:600861‑M2/123‑136 (MQ=255) ataatcactttcattcatagactcccccaagtctgatgaatggggttcatcaaagcccccactttgatgtttcctactccttgaccactacatccgctgaggtggtggcttttttattgccgGGCGAATTTACAAt > 2:1470532‑M2/123‑136 (MQ=255) gattaagtccaatgcgtccaagatacggcctgccggaatgaacgattccgtgaaggtctgctttttaccatcaataagtaattccatctttagtggtgtactcatagttttttccctccGGCGAATTTACAATTGa > 2:571156‑M2/120‑136 (MQ=255) gattaagtccaatgcgtccaagatacggcctgccggaatgaacgattccgtgaaggtctgctttttaccatcaataagtaattccatctttagtggtgtactcatagttttttccctccGGCGAATTTACAATTGa > 1:2226378‑M2/120‑136 (MQ=255) tcactttcattcatagactcccccaagtctgatgaatggggttcatcaaagcccccactttgatgtttcctactccttgaccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGaa < 2:271148‑M2/18‑1 (MQ=255) caatgcgtccaagatacggcctgccggaatgaacgattccgtgaaggtctgctttttaccatcaataagtaattccatctttagtggtgtactcatagttttttccctccGGCGAATTTACaa < 1:996048‑M2/13‑1 (MQ=255) cgtccaagatacggcctgccggaatgaacgattccgtgaaggtctgctttttaccatcaataagtaattccatctttagtggtgtactcatagttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAg > 1:2526150‑M2/106‑136 (MQ=255) gtccaagatacggcctgccggaatgaacgattccgtgaaggtctgctttttaccatcaataagtaattccatctttagtggtgtactcatagttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGt > 1:2286498‑M2/105‑136 (MQ=255) ctcccccaagtctgatgaatggggttcatcaaagcccccactttgatgtttcctactccttgaccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTaaa > 1:209088‑M2/102‑136 (MQ=255) aagatacggcctgccggaatgaacgattccgtgaaggtctgctttttaccatcaataagtaattccatctttagtggtgtactcatagttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTaaaa > 1:2381202‑M2/101‑136 (MQ=255) aagatacggcctgccggaatgaacgattccgtgaaggtctgctttttaccatcaataagtaattccatctttagtggtgtactcatagttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTaaaa < 1:1816646‑M2/36‑1 (MQ=255) agatacggcctgccggaatgaacgattccgtgaaggtctgctttttaccatcaataagtaattccatctttagtggtgtactcatagttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTaaaaa > 2:819074‑M2/100‑136 (MQ=255) agatacggcctgccggaatgaacgattccgtgaaggtctgctttataccatcaataagtaattccatctttagtggtgtactcatagttttttccctccGGCGAAATTACAATTGAAATGCAACACAAAGTaaaaa > 1:235371‑M2/100‑136 (MQ=255) ccccaagtctgatgaatggggttcatcaaagcccccactttgatgtttcctactccttgaccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTaaaaaa < 1:553802‑M2/38‑1 (MQ=255) cccaagtctgatgaatggggttcatcaaagcccccactttgatgtttcctactccttgaccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTaaaaaaa > 1:1377386‑M2/98‑136 (MQ=255) tacggcctgccggaatgaacgattccgtgaaggtctgctttttaccatcaataagtaattccatctttagtggtgtactcatagttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTaaaaaa < 2:1536296‑M2/38‑1 (MQ=255) caagtctgatgaatggggttcatcaaagcccccactttgatgtttcctactccttgaccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATa > 1:25755‑M2/96‑136 (MQ=255) tctgatgaatggggttcatcaaagcccccactttgatgtttcctactccttgaccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAAc > 1:1350080‑M2/92‑135 (MQ=255) ctgccggtatgaacgattccgtgaaggtctgctttttaccatcaataagtaattccttcttttgttgtgtaatcatagttttttccctccGGCGAATTTACAATTGAAATGCAACACAATGTAAAAAAATAAAccc < 2:1345296‑M2/46‑1 (MQ=255) ctgccggaatgaacgattccgtgaaggtctgctttttaccatcaataagtaattccatctttagtggtgtactcatagttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAAccc < 1:1878368‑M2/46‑1 (MQ=255) ctgccggaatgaacgattccgtgaaggtctgctttttaccatcaataagtaattccatctttagtggtgtactcatagttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAAccc < 1:704921‑M2/46‑1 (MQ=255) ctgccggaatgaacgattccgtgaaggtctgctttttaccatcaataagtaattccatctttagtggtgtactcatagttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAAccc > 1:1269780‑M2/91‑136 (MQ=255) ctgccggaatgaacgattccgtgaaggtctgctttttaccatcaataagtaattccatctttagtggtgtactcatagttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAAccc < 2:160608‑M2/46‑1 (MQ=255) ctgatgaatggggttcatcaaagcccccactttgatgtttcctactccttgaccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAAccc < 1:1918531‑M2/46‑1 (MQ=255) ctgatgaatggggttcatcaaagcccccactttgatgtttcctactccttgaccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAAccc < 1:636697‑M2/46‑1 (MQ=255) ctgatgaatggggttcatcaaagcccccactttgatgtttcctactccttgaccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAAccc < 1:1192742‑M2/46‑1 (MQ=255) tgccggaatgaacgattccgtgaaggtctgctttttaccatcaataagtaattccatctttagtggtgtactcatagttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCa < 1:1733389‑M2/47‑1 (MQ=255) gaatggggttcatcaaagcccccactttgatgtttcctactccttgaccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATAcc > 2:2353089‑M2/86‑136 (MQ=255) gaatggggttcatcaaagcccccactttgatgtttcctactccttgaccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATAcc < 2:2232360‑M2/51‑1 (MQ=255) gaatggggttcatcaaagcccccactttgatgtttcctactccttgaccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATAcc > 1:1459321‑M2/86‑136 (MQ=255) gaatgaacggttccgtgaaggtctgctttttaccatcaataagtaattccatctttagtggtgtactcatagttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCg > 1:2482773‑M2/85‑136 (MQ=255) ggttcatcaaagcccccactttgatgtttcctactccttgaccactacatccgctgatgtggtggcttttttattgccgGGCGACTTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAg > 1:874572‑M2/80‑136 (MQ=255) tcaaagcccccactttgatgtttcctactccttgaccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATg < 2:1816151‑M2/63‑1 (MQ=255) caaagcccccactttgatgtttcctactccttgaccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGt < 2:2149587‑M2/64‑1 (MQ=255) aaagcccccactttgatgtttcctactccttgaccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACACTTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGt > 2:1503347‑M2/72‑135 (MQ=255) ccccactttgatgtttcctactccttgaccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACg > 1:540978‑M2/67‑136 (MQ=255) ctgctttttaccatcaataagtaattccatctttagtggtgtactcatagttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCa > 1:33426‑M2/63‑136 (MQ=255) ctttgatgtttcctactccttgaccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCaa > 2:632170‑M2/62‑136 (MQ=255) tttgatgtttcctactccttgaccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGt > 2:2079365‑M2/61‑124 (MQ=255) ttgatgtttcctactccttgaccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAAt < 2:179017‑M2/77‑1 (MQ=255) ttgatgtttcctactccttgaccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAAt < 1:2452899‑M2/77‑1 (MQ=255) tttttaccatcaataagtaattccatctttagtggtgtactcatagttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATc < 2:384554‑M2/78‑1 (MQ=255) gtttcctactccttgaccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAAc > 1:1522613‑M2/55‑136 (MQ=255) ttcctactccttgaccactacctccgctgatgtggtggctttattattgccgGGCGAATTTACAATTGAAATGCAACACAAATTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATcacaca < 1:1500565‑M2/83‑1 (MQ=255) ttcctactccttgaccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACaa > 1:1573209‑M2/53‑136 (MQ=255) catcaataagtaattccatctttagtggtgtactcatagttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAAt > 2:608508‑M2/52‑136 (MQ=255) atcaataagtaattccatctttagtggtgtactcatagttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATc > 1:1019829‑M2/51‑128 (MQ=255) taagtaattccatctttagtggtgtactcatagttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAgg < 1:164832‑M2/91‑1 (MQ=255) taagtaattccatctttagtggtgtactcatagttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAgg < 1:1303257‑M2/91‑1 (MQ=255) taagtaattccatctttagtggtgtactcatagttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAgg < 1:428514‑M2/91‑1 (MQ=255) cttgaccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTa > 2:534229‑M2/44‑136 (MQ=255) gaccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATcc < 2:1110979‑M2/96‑1 (MQ=255) ttccatctttagtggtgtactcatagttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCgg < 2:2044405‑M2/98‑1 (MQ=255) ttccatctttagtggtgtactcatagttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCgg < 2:157436‑M2/98‑1 (MQ=255) ccactacctccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCgg < 1:96494‑M2/98‑1 (MQ=255) ccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAg > 1:1809960‑M2/39‑69 (MQ=255) ccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCgg < 2:726995‑M2/98‑1 (MQ=255) ccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCgg < 2:932889‑M2/98‑1 (MQ=255) ccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCgg < 1:1050680‑M2/98‑1 (MQ=255) ccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCgg < 2:1402316‑M2/98‑1 (MQ=255) ccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCgg > 2:1737758‑M2/39‑136 (MQ=255) cactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCGGt > 2:2511036‑M2/38‑136 (MQ=255) ccatctgtagtggtgtactcatagttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCgg < 1:2073715‑M2/98‑1 (MQ=255) actacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCgg > 2:1049379‑M2/37‑134 (MQ=255) actacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCGGTa > 2:417282‑M2/37‑136 (MQ=255) ctacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCGGTAt < 2:2280177‑M2/101‑1 (MQ=255) catctttagtggtgtactcatagttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCGGTAt < 1:1147261‑M2/101‑1 (MQ=255) catctttagtggtgtactcatagttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCGGTAt > 1:1696931‑M2/36‑136 (MQ=255) acatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAGATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCGGTATGa < 2:2212037‑M2/103‑1 (MQ=255) catccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAgg < 2:473080‑M2/91‑1 (MQ=255) atccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACACTTCGAGGTATCCGGTAGGa > 2:974612‑M2/32‑134 (MQ=255) atccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCGGTATGa > 2:1300356‑M2/32‑134 (MQ=255) atccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCGGTATGa > 2:198380‑M2/32‑134 (MQ=255) atccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCGGTATGa > 2:1086706‑M2/32‑134 (MQ=255) gatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCGGTATGAGCTATAAAc > 1:920591‑M2/25‑136 (MQ=255) tgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCGGTATGAGCTATAAACa < 1:2170223‑M2/113‑1 (MQ=255) tgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCGGTATGAGCTATAAACa < 1:1212464‑M2/113‑1 (MQ=255) tgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCGGTATGAGCTATAAACa < 2:873931‑M2/113‑1 (MQ=255) tgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCGGTATGAGCTATAAACa < 1:838889‑M2/113‑1 (MQ=255) gtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCGGTATGAGCTATAAACa > 2:1887135‑M2/22‑134 (MQ=255) gtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCGGTATGAGCTATAAACATc < 2:2524231‑M2/115‑1 (MQ=255) tcatagttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGATGTATCCGGTATGAGCTATAAACATCtt > 2:2474045‑M2/19‑135 (MQ=255) tcatagttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCGGTATGAGCTATAAACATCtt > 2:2102746‑M2/19‑135 (MQ=255) tcatagttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCGGTATGAGCTATAAACATCtt > 1:1627033‑M2/19‑135 (MQ=255) tcatagatttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACACATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCGGTATGAGCTATAAACATCTTa > 2:121249‑M2/19‑136 (MQ=255) gcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATAcc > 1:521226‑M2/16‑66 (MQ=255) gttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCGGTATGAGCTATAAACATCTTACtata > 1:201772‑M2/14‑136 (MQ=255) tttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCg > 1:440486‑M2/12‑108 (MQ=255) tttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCGGTATGAGCTATAAACATCTTACTATaaa > 2:1369716‑M2/12‑136 (MQ=255) ttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCGGTATGAGCTATAAACATCTTACTATaaa < 1:2503948‑M2/125‑1 (MQ=255) ttgccgTGAGAATTTAAAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCGGTATGAGCTATAAACATCTTACTATAAAagatc < 1:719924‑M2/130‑3 (MQ=255) tgccgGGCGAATTTACAATTTAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCGGTATGAGCTATAAACATCTTACTATAAAAGAACg > 1:2003264‑M2/6‑136 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCGGTATGAGCTATAAACATCTTACTATAAAAGAACGTGAAA > TrimmedAssembly_T66_contig_35/1‑136 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |