| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | TrimmedAssembly_T66_contig_11 | = 96142 | 0 (0.000) | 164 (0.930) | 35/204 | 2.0 | 76.6% | intergenic (+314/–) | rasttk_feature_annotation_tool=elepa@bvbrc/– | hypothetical protein/– |
| ? | TrimmedAssembly_T66_contig_9 | = 72 | 100 (0.510) | intergenic (–/+187) | –/rasttk_feature_annotation_tool=elepa@bvbrc | –/hypothetical protein | |||||
Only 100 of 206 total aligned reads displayed.
TAACTTGAACTTTTCCCAGTGGGTCTAAGCTGGCTGCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > TrimmedAssembly_T66_contig_11/95982‑96142‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggtctggaaaaatcttcggatttttcCAGACCTGCTTTTGATATAATAGAAAATAAAAAAAAAAGCATCGGTCGCACCCGATACTCTACGAAATTATC‑‑‑‑‑ < TrimmedAssembly_T66_contig_9/72‑1 TAACTTGAACTTTTCCCAGTGGGTCTAAGCTGGCTGCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAG > 2:64963/1‑136TAACTTGAACTTTTCCCAGTGGGTCTAAGCTGGCTGCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACA < 1:646684/135‑1 TGAACTTTTCCCAGTGGGTCTAAGCTGGCTGCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTG > 2:1574435/1‑136 TGAACTTTTCCCAGTGGGTCTAAGCTGGCTGCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTG > 1:1316522/1‑136 TGAACTTTTCCCAGTGGGTCTAAGCTGGCTGCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTG > 1:1481420/1‑136 TGAACTTTTCCCAGTGGGTCTAAGCTGGCTGCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTG > 1:1851551/1‑136 CCAGTGGGTCTAAGCTGGCTGCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCT > 2:1799349/1‑135 CCAGTGGGTCTAAGCTGGCTGCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCT > 2:402438/1‑135 CCAGTGGGTCTAAGCTGGCTGCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCT > 2:567666/1‑135 CCAGTGGGTCTAAGCTGGCTGCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCT > 2:1225538/1‑135 AGTGGGTCTAAGCTGGCTGCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACA > 2:1713697/1‑118 AGTGGGTCTAAGCTGGCTGCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACA < 1:1713697/118‑1 AGCTGGCTTCTTTTTAACTTAAGAATCGGCACTTTTTATTCATGATTGTTTTATAACGATGAGTAATACAAAAACGAGGCTGTGACATAAGTCTATAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCA < 1:1574107/136‑1 AGCTGGCAGCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCA < 2:1427340/136‑1 TGGCTGCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAAT‑AAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGA > 2:2223780/1‑134 TGCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGt < 1:835594/136‑2 TGCTTTTGAACTTAAGAATCGGCACGATTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGt < 1:1162926/136‑2 GCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGtt > 2:2468825/1‑134 GCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGtt > 1:2532981/1‑134 GCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGtt > 1:2702848/1‑134 GCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGtt > 1:2478012/1‑134 GCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGtt > 2:2638855/1‑134 GCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGtt > 2:1044421/1‑134 GCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGtt > 2:1083317/1‑134 GCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGtt > 1:2064382/1‑134 GCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGtt > 2:153250/1‑134 GCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGtt > 2:524011/1‑134 GCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGtt > 1:2000728/1‑134 GCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAAAAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGtt > 2:1907387/1‑134 TGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGt > 2:1112563/1‑129 AACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATA > 1:2116100/1‑136 ACTTATGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACTGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATA < 2:1842/135‑1 GAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGA > 1:2321399/1‑136 GAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGA > 1:995491/1‑136 AATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTT < 2:596045/108‑1 ACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAATAAA < 1:1885734/135‑1 ACGATTTAATCATGATTGTATAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAAACTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAATAAAA < 2:1764527/136‑1 TTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAATAAAAAAAga > 2:2625650/1‑134 ATGATTGTTTAATACCGATGAGAAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAATTCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGCAACT‑AAAAAAAGAGCATCG < 1:1593861/136‑1 ATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCG < 2:2479349/136‑1 ATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCG < 1:598705/136‑1 ATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCG < 1:549174/136‑1 ATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCG < 2:2321399/136‑1 ATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCG < 1:1890718/136‑1 ATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCG < 1:1959492/136‑1 ATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCG < 2:2842449/136‑1 ATGATTGTCTAATAACGATGAGTAATAAAAAAACGAGGCTGAGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAAACTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAACAAGAGCATCG < 2:2777095/136‑1 GATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGT < 2:2103133/136‑1 TTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTC > 1:2605965/1‑135 GTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGC > 1:2331426/1‑135 GTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGC > 1:1004613/1‑135 AATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCG > 2:175280/1‑136 ACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATAC < 2:1141014/136‑1 GATGTGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTATAAACAAAACAGGACTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTC < 2:842947/136‑1 GATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATAC > 2:544562/1‑134 AGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCTACG > 1:87074/1‑136 AGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCTACG > 2:1850343/1‑136 AGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCTACG > 1:282846/1‑136 AGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCTACG > 1:2844405/1‑136 AGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCTACG > 1:1368500/1‑136 AGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCTACG > 1:1139554/1‑136 tagaacAAAAAAGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATATAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCTACGAA > 1:1651103/7‑136 tagaacAAAAAAGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCTACGAA > 1:110617/7‑136 tagaacAAAAAAGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCTACGAA > 2:1349868/7‑136 tagaacAAAAAAGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCTACGAA > 1:1689053/7‑136 tagaacAAAAAAGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCTACGAA > 1:2052303/7‑136 tagaacAAAAAAGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCTACGAA > 1:2313190/7‑136 taacAAAAAAGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCTACGAAAT < 2:918199/132‑1 cAAAAAAGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCTACGAAATTA > 1:386010/2‑135 cAAAAAAGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCTACGAAATTA > 1:567063/2‑135 cAAAAAAGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCTACGAAATTA > 2:1880046/2‑135 AAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGT > 2:2656937/1‑110 AAAAAAGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCTACGAAATTAT > 1:1533089/1‑135 tagaGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCTACGAAATTATCct < 1:674086/132‑3 tagaGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCTACGAAATTATCct < 1:769033/132‑3 tagaGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCTACGAAATTATCct < 2:2286134/132‑3 AAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCTGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCTACGAAATTATCct < 1:502391/136‑3 AAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCTACGAAATTATCct < 1:61265/136‑3 aaGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCTACGAAATTATCctcg > 2:1949904/3‑132 aaGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCTACGAAATTATCctcg > 2:1072437/3‑132 aGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCTACGAAATTATCctcga > 2:2165810/2‑131 CGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCTACGAAATTATCctcga < 1:2655973/136‑6 CGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCTACGAAATTATCctcga > 2:810963/1‑131 GAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCTACGAAATTATCctcga < 1:1748651/135‑6 AGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCA < 1:1293315/47‑1 AGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCA > 2:1293315/1‑47 TCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAATAAAAAAAgag > 2:2408463/1‑76 TCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAATAAAAAAAgag < 1:2408463/79‑4 TCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTT < 2:1894065/38‑1 AAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGC > 2:2429544/1‑84 AAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTG > 1:2226742/1‑50 AAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTG < 2:2226742/50‑1 AAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCCGTTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGT > 2:1414123/1‑81 TGGAAAAATCTTCGGATTTTTCCAGACCTGTTTTTGATA > 1:124673/1‑39 AAATCTTCGGATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGAT > 2:148564/1‑72 AAATCTTCGGATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGAT < 1:148564/72‑1 TTCGGATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCTACGAAATTATCct < 1:2219188/85‑3 TTCGGATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCTACGAAATTATCct > 1:2217624/1‑83 TTCGGATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCTACGAAATTATCct > 2:2219188/1‑83 TTCGGATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCTACGAAATTATCct < 2:2217624/85‑3 TAACTTGAACTTTTCCCAGTGGGTCTAAGCTGGCTGCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > TrimmedAssembly_T66_contig_11/95982‑96142‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggtctggaaaaatcttcggatttttcCAGACCTGCTTTTGATATAATAGAAAATAAAAAAAAAAGCATCGGTCGCACCCGATACTCTACGAAATTATC‑‑‑‑‑ < TrimmedAssembly_T66_contig_9/72‑1 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |