| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | TrimmedAssembly_T66_contig_11 | = 96142 | 0 (0.000) | 164 (0.930) | 35/204 | 2.0 | 76.6% | intergenic (+314/–) | rasttk_feature_annotation_tool=elepa@bvbrc/– | hypothetical protein/– |
| ? | TrimmedAssembly_T66_contig_9 | = 72 | 100 (0.510) | intergenic (–/+187) | –/rasttk_feature_annotation_tool=elepa@bvbrc | –/hypothetical protein | |||||
Only 100 of 173 total aligned reads displayed.
AGCTGGCTGCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > TrimmedAssembly_T66_contig_11/96009‑96142 | aGCTGGCTTCTTTTTAACTTAAGAATCGGCACTTTTTATTCATGATTGTTTTATAACGATGAGTAATACAAAAACGAGGCTGTGACATAAGTCTATAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCca < 1:1574107‑M1/136‑3 (MQ=255)aGCTGGCTGCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCca < 2:1427348‑M1/136‑3 (MQ=255) tggctgCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcaga > 2:189924‑M1/1‑131 (MQ=255) tggctgCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAAT‑AAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcaga > 2:2223780‑M1/1‑130 (MQ=255) tgctTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgt < 1:835581‑M1/136‑10 (MQ=255) tgctTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgt > 2:2478025‑M1/1‑127 (MQ=255) tgctTTTGAACTTAAGAATCGGCACGATTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgt < 1:1162926‑M1/136‑10 (MQ=255) gctTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtt > 1:1813545‑M1/1‑126 (MQ=255) gctTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtt > 1:2064382‑M1/1‑126 (MQ=255) gctTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtt > 1:1913681‑M1/1‑126 (MQ=255) gctTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtt > 1:229091‑M1/1‑126 (MQ=255) gctTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtt > 1:2478012‑M1/1‑126 (MQ=255) gctTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtt > 1:2702848‑M1/1‑126 (MQ=255) gctTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtt > 2:153250‑M1/1‑126 (MQ=255) gctTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtt > 2:1306538‑M1/1‑126 (MQ=255) gctTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtt > 2:1083317‑M1/1‑126 (MQ=255) gctTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtt > 2:1044421‑M1/1‑126 (MQ=255) gctTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtt > 1:1082721‑M1/1‑126 (MQ=255) gctTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtt > 2:549174‑M1/1‑126 (MQ=255) gctTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtt > 2:524011‑M1/1‑126 (MQ=255) gctTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtt > 2:2468650‑M1/1‑126 (MQ=255) gctTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtt > 2:2655973‑M1/1‑126 (MQ=255) gctTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtt > 2:2638855‑M1/1‑126 (MQ=255) gctTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAAAAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtt > 2:1907387‑M1/1‑126 (MQ=255) gctTTTGAACTTAAGAATCGGCACGTTTTAATCATAATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtt > 2:8666‑M1/1‑126 (MQ=255) ctTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgttt > 2:109338‑M1/1‑125 (MQ=255) ctTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgttt > 2:1757773‑M1/1‑125 (MQ=255) tGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgt < 1:1112563‑M1/130‑10 (MQ=255) aaCTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgata > 1:2116100‑M1/1‑119 (MQ=255) aCTTATGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACTGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgata < 2:1842‑M1/135‑18 (MQ=255) gAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataataga > 1:2321399‑M1/1‑112 (MQ=255) gAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataataga > 1:995491‑M1/1‑112 (MQ=255) aaTCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaa > 2:838209‑M1/1‑111 (MQ=255) aCGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaa < 1:1885734‑M1/135‑32 (MQ=255) aCGATTTAATCATGATTGTATAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAAACTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaa < 2:1764527‑M1/136‑33 (MQ=255) cGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaa > 2:2268041‑M1/1‑103 (MQ=255) ttAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAACCAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgattttgatataatagaaaataaaaaaaga < 2:2318440‑M1/136‑38 (MQ=255) ttAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaaga > 2:2625650‑M1/1‑99 (MQ=255) aTGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaagagcatcg < 2:2842449‑M1/136‑44 (MQ=255) aTGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaagagcatcg < 1:1361777‑M1/136‑44 (MQ=255) aTGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaagagcatcg < 1:549174‑M1/136‑44 (MQ=255) aTGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaagagcatcg < 2:2479349‑M1/136‑44 (MQ=255) aTGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaagagcatcg < 1:598705‑M1/136‑44 (MQ=255) aTGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaagagcatcg < 1:1890393‑M1/136‑44 (MQ=255) aTGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaagagcatcg < 2:1851551‑M1/136‑44 (MQ=255) gATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaagagcatcggt < 2:2103133‑M1/136‑46 (MQ=255) ttGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaagagcatcggtc > 1:2605965‑M1/1‑89 (MQ=255) ttGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaagagcatcggtc > 2:2391220‑M1/1‑89 (MQ=255) tGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaagagcatcggtcgc < 1:838209‑M1/136‑49 (MQ=255) gTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaagagcatcggtcgc > 1:1004613‑M1/1‑87 (MQ=255) gTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaagagcatcggtcgc > 2:61265‑M1/1‑87 (MQ=255) gTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaagagcatcggtcgc > 1:1526783‑M1/1‑87 (MQ=255) gTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaagagcatcggtcgc > 1:1565415‑M1/1‑87 (MQ=255) gTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaagagcatcggtcgc > 1:1621749‑M1/1‑87 (MQ=255) gTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaagagcatcggtcgc > 1:2331426‑M1/1‑87 (MQ=255) aataaCGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaagagcatcggtcgcacccg > 2:2193897‑M1/1‑83 (MQ=255) aataaCGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaagagcatcggtcgcacccg > 1:1141014‑M1/1‑83 (MQ=255) aataaCGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaagagcatcggtcgcacccg > 1:2560563‑M1/1‑83 (MQ=255) aCGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaagagcatcggtcgcacccgatac < 2:1141014‑M1/136‑58 (MQ=255) cGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaagagcatcggtcgcacccgatact < 2:951781‑M1/136‑59 (MQ=255) gAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaagagcatcggtcgcacccgatactctac > 1:2829517‑M1/1‑74 (MQ=255) aGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaagagcatcggtcgcacccgatactctacg > 1:1368500‑M1/1‑73 (MQ=255) aGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaagagcatcggtcgcacccgatactctacg > 1:1992992‑M1/1‑73 (MQ=255) aGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaagagcatcggtcgcacccgatactctacg > 1:2189235‑M1/1‑73 (MQ=255) aGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaagaaaaaaagtgcatcggtcgcacccgatactctacg > 2:465695‑M1/1‑73 (MQ=255) aGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTGTCcagacctgtttttgatataatagacaataaaaaaagagcttcggtcgcacccgatactctacg > 2:1688115‑M1/1‑73 (MQ=255) aGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGACTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaagagcatcggtcgcacccgatactctacg > 2:1420649‑M1/1‑73 (MQ=255) tagaacaaaaaagaggctGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaagagcatcggtcgcacccgatactctacgaa > 1:2052303‑M1/7‑71 (MQ=255) tagaacaaaaaagaggctGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaagagcatcggtcgcacccgatactctacgaa > 1:1689053‑M1/7‑71 (MQ=255) tagaacaaaaaagaggctGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaagagcatcggtcgcacccgatactctacgaa > 1:2032704‑M1/7‑71 (MQ=255) tagaacaaaaaagaggctGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaagagcatcggtcgcacccgatactctacgaa > 1:2313190‑M1/7‑71 (MQ=255) tagaacaaaaaagaggctGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaagagcatcggtcgcacccgatactctacgaa > 2:1349868‑M1/7‑71 (MQ=255) taaAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaagagcatcggtcgcacccgatactctacgaaatt > 1:880832‑M1/1‑68 (MQ=255) caaaaaagAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaagagcatcggtcgcacccgatactctacgaaatta > 1:567063‑M1/2‑66 (MQ=255) caaaaaagAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaagagcatcggtcgcacccgatactctacgaaatta > 1:386010‑M1/2‑66 (MQ=255) caaaaaagAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaagagcatcggtcgcacccgatactctacgaaatta > 1:1680082‑M1/2‑66 (MQ=255) aaaaaCGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaagagcatcggt < 1:2656937‑M1/110‑46 (MQ=255) ctagagaggctGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaagagcatcggtcgcacccgatactctacgaaattat > 2:2714182‑M1/6‑64 (MQ=255) tagagaggcTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaagagcatcggtcgcacccgatactctacgaaattatcct < 1:674086‑M1/132‑74 (MQ=255) tagagaggcTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaagagcatcggtcgcacccgatactctacgaaattatcct < 1:769033‑M1/132‑74 (MQ=255) aaaCGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCctgacctgtttttgatataatagaaaataaaaaaagagcatcggtcgcacccgatactctacgaaattatcct < 1:502391‑M1/136‑74 (MQ=255) aaaCGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaagagcatcggtcgcacccgatactctacgaaattatcct < 1:61265‑M1/136‑74 (MQ=255) aagagGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaagagcatcggtcgcacccgatactctacgaaattatcctcg > 2:1949904‑M1/3‑61 (MQ=255) aagagGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaagagcatcggtcgcacccgatactctacgaaattatcctcg > 2:1072437‑M1/3‑61 (MQ=255) aagagGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaagagcatcggtcgcacccgatact < 1:287225‑M1/117‑59 (MQ=255) cGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaagagcatcggtcgcacccgatactctacgaaattatcctcga > 2:810963‑M1/1‑60 (MQ=255) agaGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaagagcatcggtcgcacccgatactctacgaaattatcctcga > 1:1485063‑M1/2‑60 (MQ=255) gAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaagagcatcggtcgcacccgatactctacgaaattatcctcga < 1:1748651‑M1/135‑77 (MQ=255) aGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCca < 1:1293315‑M1/47‑3 (MQ=255) tctAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaagag > 2:2408463‑M1/1‑41 (MQ=255) aaacaaaacaGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaagagcatcggtcgc < 1:2429544‑M1/84‑49 (MQ=255) aaacaaaacaGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttgatataatagaaaataaaaaaagagcatcggtcgc > 2:2429544‑M1/1‑36 (MQ=255) aaacaaaacaGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttg > 1:2226704‑M1/1‑36 (MQ=255) aaacaaaacaGGTCTGGAAAAATCTTCGGATTTTTCcagacctgtttttg < 2:2226704‑M1/50‑15 (MQ=255) aacaaaacaGGTCTGGAAAAATCTTCGGATTTTTCcaga < 2:124673‑M1/39‑5 (MQ=255) tGGAAAAATCTTCGGATTTTTCcagacctgtttttgata > 1:124673‑M1/1‑22 (MQ=255) aaaTCTTCGGATTTTTCcagacctgcttttgatataatagaaaataaaaaaagagcatcggtcgcacccgat > 2:148564‑M1/1‑17 (MQ=255) ttCGGATTTTTCcagacctgcttttgatataatagaaaataaaaaaagagcatcggtcgcacccgatactctacgaaattatcct > 2:2219188‑M1/1‑12 (MQ=255) ttCGGATTTTTCcagacctgcttttgatataatagaaaataaaaaaagagcatcggtcgcacccgatactctacgaaattatcct < 2:2217624‑M1/85‑74 (MQ=255) ttCGGATTTTTCcagacctgcttttgatataatagaaaataaaaaaagagcatcggtcgcacccgatactctacgaaattatcct < 1:2219158‑M1/85‑74 (MQ=255) | AGCTGGCTGCTTTTGAACTTAAGAATCGGCACGTTTTAATCATGATTGTTTAATAACGATGAGTAATAAAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAACAGGTCTGGAAAAATCTTCGGATTTTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > TrimmedAssembly_T66_contig_11/96009‑96142 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |