| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | TrimmedAssembly_T66_contig_15 | 1 = | 0 (0.000) | 180 (0.370) +GGTAGCGTCAAGAATCTTGTGTAAATGAAATGCCTTCGTACATATAATATGTATCTAACT |
46/140 | 0.1 | 100% | intergenic (–/‑70) | –/rasttk_feature_annotation_tool=annotate_proteins_km er_v2 | –/Transcriptional regulator, RpiR family |
| ? | TrimmedAssembly_T66_contig_36 | = 864 | 0 (0.000) | intergenic (+2/–) | rasttk_feature_annotation_tool=annotate_proteins_km er_v2/– | Transposase/– | |||||
Only 100 of 275 total aligned reads displayed.
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTTTTTTAGAAGCGGTTACGCATTTATGGTAATCTAGTGAATAGATTATTAGATAGGGTGGTGGCTAACCGTGGCATTCTTTGGCTATAAGGATATCGATAAGTTATCTGGAGTAGATTTAGCAATTTATCGATTT > TrimmedAssembly_T66_contig_15/1‑136 | taacgagaagtctctgaagcggatccaccgagggttcaaaggactccaggacaccttggaagcatcatttatttaagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccg > 1:1713721‑M1/136‑136 (MQ=255) acgagaagtctctgaagcggatccaccgagggttcaaaggactccaggacaccttggaagcatcatttatttaagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccg < 1:1022011‑M1/1‑1 (MQ=255) acgagaagtctctgaagcggatccaccgagggttcaaaggactccaggacaccttggaagcatcatttatttaagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccg < 1:2410477‑M1/1‑1 (MQ=255) agtctctgaagcggatccaccgagggttcaaaggactccaggacaccttggaagcatcatttatttaagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccGTTTTTTAg > 2:389710‑M1/128‑136 (MQ=255) gactctgaatcgtatccaccgagggtacaaaggactccaggacaccttggaagcatcaattatttaagatagatacataatatatttacgaaggcatttcatttacacaagattcttgacgctaccGTTTTTTAGa < 1:2107963‑M1/10‑1 (MQ=255) tgaagcggatccaccgagggttcaaaggactccaggacaccttggaagcatcatttatttaagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccGTTTTTTAGAAGCgg > 2:2724126‑M1/122‑136 (MQ=255) tgaagcggatccaccgagggttcaaaggactccaggacaccttggaagcatcatttatttaagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccGTTTTTTAGAAGCgg > 2:2823246‑M1/122‑136 (MQ=255) tgaagcggatccaccgagggttcaaaggactccaggacaccttggaagcatcatttatttaagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccGTTTTTTAGAAGCgg > 1:2472158‑M1/122‑136 (MQ=255) tgaagcggatccaccgagggttcaaaggactccaggacaccttggaagcatcatttatttaagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccGTTTTTTAGAAGCgg > 2:2033041‑M1/122‑136 (MQ=255) ggatccaccgagggttcaaaggactccaggacaccttggaagcatcatttatttaagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccGTTTTTTAGAAGCGGTTACg > 2:1062436‑M1/116‑135 (MQ=255) ggatccaccgagggttcaaaggactccaggacaccttggaagcatcatttatttaagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccGTTTTTTAGAAGCGGTTACGc > 2:2764772‑M1/116‑136 (MQ=255) ccaccgagggttcaaaggactccaggacaccttggaagcatcatttatttaagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccGTTTTTTAGAAGCGGTTACGCAttt > 2:1571420‑M1/112‑136 (MQ=255) caccgagggttcaaaggactccaggacaccttggaagcatcatttatttaagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccGTTTTTTAGAAGCGGTTACGCATTTa < 1:1250325‑M1/26‑1 (MQ=255) ccgaggtttcaacggactccaggtcaccttggaagcatcatttatttaagttagattcatattttatgtacgatggcatttcatttacacaagattcttgacgctaccGTTTTTTAGAATCGGTTTCGCATTTATg > 2:614348‑M1/109‑136 (MQ=255) ccgagggttcaaaggactccaggacaccttggaagcatcacttatttaagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccGTTTTTTAGAAGCGGTTACGCATTTATg > 2:1508992‑M1/109‑136 (MQ=255) ggttcaaaggactccaggacaccttggaagcatcatttatttaagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccGTTTTTTAGAAGCGGTTACGCATTTATGGTaa < 1:2440033‑M1/32‑1 (MQ=255) gttcaaaggactccaggacaccttggaagcatcatttatttaagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccGTTTTTTAGAAGCGGTTACGCATTTATGGTaa < 1:416231‑M1/32‑1 (MQ=255) tcaaaggactccaggacaccttggaagcatcatttatttaagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccGTTTTTTAGAAGCGGTTACGCATTTATGGTAATCTa < 1:1645474‑M1/36‑1 (MQ=255) aaaggactccaggacaccttggaagcatcatttatttaagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccGTTTTTTAGAAGCGGTTACGCATTTATGGTAATCTAGt > 2:2440033‑M1/99‑136 (MQ=255) aggactccaggacaccttggaagcatcatttatttaagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccGTTTTTTAGAAGCGGTTACGCATTTATGGTAATCTAGTGa > 2:2534817‑M1/97‑136 (MQ=255) aggactccaggacaccttggaagcatcatttatttaagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccGTTTTTTAGAAGCGGTTACGCATTTATGGTAATCTAGTGa > 2:1250325‑M1/97‑136 (MQ=255) aggactccaggacaccttggaagcatcatttatttaagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccGTTTTTTAGAAGCGGTTACGCATTTATGGTAATCTAGTGa > 1:1142716‑M1/97‑136 (MQ=255) ctccaggacaccttggaagcatcatttatttaagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccGTTTTTTAGAAGCGGTTACGCATTTATGGTAATCTAGTGAATAg > 2:2701418‑M1/93‑136 (MQ=255) tccaggacaccttggaagcatcatttatttaagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccGTTTTTTAGAAGCGGTTACGCATTTATGGTAATCTAGTGAATAGa > 1:9396‑M1/92‑136 (MQ=255) tccaggacaccttggaagcatcatttatttaagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccGTTTTTTAGAAGCGGTTACGCATTTATGGTAATCTAGTGAATAGa > 2:851281‑M1/92‑136 (MQ=255) tccaggacaccttggaagcatcatttatttaagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccGTTTTTTAGAAGCGGTTACGCATTTATGGTAATCTAGTGAATAGa > 2:772604‑M1/92‑136 (MQ=255) aggacaccttggaagcatcatttatttaagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccGTTTTTTAGAAGCGGTTACGCATTTATGGTAATCTAGTGACTAGatta < 1:226725‑M1/48‑1 (MQ=255) aggacaccttggaagcatcatttatttaagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccGTTTTTTAGAAGCGGTTACGCATTTATGGTAATCTAGTGAATAGatta < 2:1054264‑M1/48‑1 (MQ=255) aggacaccttggaagcatcatttatttaagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccGTTTTTTAGAAGCGGTTACGCATTTATGGTAATCTAGTGAATAGatta < 1:137618‑M1/48‑1 (MQ=255) aggacaccttggaagcatcatttatttaagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccGTTTTTTAGAAGCGGTTACGCATTTATGGTAATCTAGTGAATAGatta < 2:2233331‑M1/48‑1 (MQ=255) aggacaccttggaagcatcatttatttaagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccGTTTTTTAGAAGCGGTTACGCATTTATGGTAATCTAGTGAATAGatta < 2:186295‑M1/48‑1 (MQ=255) aggacaccttggaagcatcatttatttaagttagatacatattatatgtacgaaggcatttcatttacacaagagtcttgacgctaccGTTTTTTAGAAGCGGTTACGCATTTATGGTAATCTAGTGAATAGatta < 2:479779‑M1/48‑1 (MQ=255) gacaccttggaagcatcatttatttaagttagatacatattatatgtacgaaggcctttcatttacacaagattcttgacgctaccGTTTTTTAGAAGCGGTTACGCATTTATGGTAATCTAGTGAATAGattatt < 2:1519800‑M1/50‑1 (MQ=255) acaccttggaagcatcatttatttaagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccGTTTTTTAGAAGCGGTTACGCATTTATGGTAATCTAGTGAATAGattatt > 2:1610968‑M1/86‑135 (MQ=255) acaccttggaagcatcatttatttaagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccGTTTTTTAGAAGCGGTTACGCATTTATGGTAATCTAGTGAATAGattatt > 2:666022‑M1/86‑135 (MQ=255) caccttggaagcatcatttatttaagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccGTTTTTTAGAAGCGGTTACGCATTTATGGTAATCTAGTGAATAGATTATTAg > 1:1739406‑M1/85‑136 (MQ=255) cttggaagcatcatttatttaagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccGTTTTTTAGAAGCGGTTACGCATTTATGGTAATCTAGTGAATAGATTATTAGATa < 1:2610726‑M1/55‑1 (MQ=255) cttggaagcatcatttatttaagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccGTTTTTTAGAAGCGGTTACGCATTTATGGTAATCTAGTGAATAGATTATTAGATa > 2:2171272‑M1/82‑136 (MQ=255) cttggaagcatcatttatttaagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccGTTTTTTAGAAGCGGTTACGCATTTATGGTAATCTAGTGAATAGATTATTAGATa < 2:219366‑M1/55‑1 (MQ=255) tggaatcatcatttatttaagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccGTTTTTTAGAAGCGGTTACGCATTTATGGTAATCTAGTGAATAGATTATTAGATAgg > 2:1354197‑M1/80‑136 (MQ=255) tggaagcatcatttatttaagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccGTTTTTTAGAAGCGGTTACGCATTTATGGTAATCTAGTGAATAGATTATTAGATAgg > 2:171983‑M1/80‑136 (MQ=255) tggaagcatcatttatttaagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccGTTTTTTAGAAGCGGTTACGCATTTATGGTAATCTAGTGAATAGATTATTAGATAgg > 2:193753‑M1/80‑136 (MQ=255) tggaagcatcatttatttaagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccGTTTTTTAGAAGCGGTTACGCATTTATGGTAATCTAGTGAATAGATTATTAGATAgg > 1:148101‑M1/80‑136 (MQ=255) tggaagcatcatttatttaagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccGTTTTTTAGAAGCGGTTACGCATTTATGGTAATCTAGTGAATAGATTATTAGATAgg > 2:732803‑M1/80‑136 (MQ=255) tggaagcatcatttatttaagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccGTTTTTTAGAAGCGGTTACGCATTTATGGTAATCTAGTGAATAGATTATTAGATAgg > 1:1292381‑M1/80‑136 (MQ=255) tggaagcatcatttatttaagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccGTTTTTTAGAAGCGGTTACGCATTTATGGTAATCTAGTGAATAGATTATTAGATAgg > 1:1467543‑M1/80‑136 (MQ=255) ggaagcatcatttatttaagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccGTTTTTTAGAAGCGGTTACGCATTTAt < 1:526211‑M1/27‑1 (MQ=255) ggaagcatcatttatttaagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccGTTTTTTAGAAGCGGTTACGCATTTAt > 2:526211‑M1/79‑105 (MQ=255) ggaagcatcatttatttaagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccGTTTTTTAGAAGCGGTTACGCATTTATGGTAATCTAGTGAATAGATTATTAGATAggg < 2:2036151‑M1/58‑1 (MQ=255) ggaagcatcatttatttaagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccGTTTTTTAGAAGCGGTTACGCATTTATGGTAATCTAGTGAATAGATTATTAGATAggg < 1:740448‑M1/58‑1 (MQ=255) ggaagcatcatttatttaagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccGTTTTTTAGAAGCGGTTACGCATTTATGGTAATCTAGTGAATAGATTATTAGATAggg < 2:2298411‑M1/58‑1 (MQ=255) ggaagcatcatttatttaagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccGTTTTTTAGAAGCGGTTACGCATTTATGGTAATCTAGTGAATAGATTATTAGATAggg < 2:144078‑M1/58‑1 (MQ=255) ggaagcatcatttatttaagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccGTTTTTTAGAAGCGGTTACGCATTTATGGTAATCTAGTGAATAGATTATTAGATAggg < 1:2139141‑M1/58‑1 (MQ=255) ggaagcatcatttatttaagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccGTTTTTTAGAAGCGGTTACGCATTTATGGTAATCTAGTGAATAGATTATTAGATAggg < 1:300824‑M1/58‑1 (MQ=255) ggaagcatcatttatttaagttagatacatattatatgtacgaaggcatttcatttacacaagattcatgacgctaccGTTTTTTAGAAGCGGTTACGCATTTATGGTAATCTCGTGAATAGATTATTAGATAggg < 1:800494‑M1/58‑1 (MQ=255) ggaagcatcatttatttaagttagatacatattatatgtacgaaggaatttcatttacacaagattcttgacgctaccGTTTTTTAGAAGCGGTTACGCATTTATGGTAATCTAGTGAATAGATTATTAGAtagtg < 2:634151‑M1/58‑3 (MQ=255) aagcatcatttatttaagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccGTTTTTTAGAAGCGGTTACGCATTTATGGTAATCTAGTGAATAGATTATTAGATAGggtg < 2:2382614‑M1/60‑1 (MQ=255) aagcatcatttatttaagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccGTTTTTTAGAAGCGGTTACGCATTTATGGTAATCTAGTGAATAGATTATTAGATAGggtg < 2:2630201‑M1/60‑1 (MQ=255) catttatttaagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccGTTTTTTAGAAGCGGTTACGCATTTATGGTAATCTAGTGa > 1:1545181‑M1/71‑110 (MQ=255) tttatttaagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccGTTTTTTAGAAGCGGTTACGCATTTATGGTAATCTAGTGAATAGattatt < 1:1895870‑M1/50‑1 (MQ=255) tttatttaagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccGTTTTTTAGAAGCGGTTACGCATTTATGGTAATCTAGTGAATAGAttatta < 2:1804986‑M1/51‑1 (MQ=255) tttatttaagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccGTTTTTTAGAAGCGGTTACGCATTTATGGTAATCTAGTGAATAGATTATTAGATAGGGTGGTGGCTa < 1:1616954‑M1/67‑1 (MQ=255) tttatttaagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccGTTTTTTAGAAGCGGTTACGCATTTATGGTAATCTAGTGAATAGATTATCAGATAGGGTGGTGGCTa < 2:2831621‑M1/67‑1 (MQ=255) gttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccGTTTTTTAGAAGCGGTTACGCATTTATGGTAATCTAGTGAATAGATTATTAGATAGGGTGGTGGCTAACCGTGGCAt < 1:2026652‑M1/77‑1 (MQ=255) tagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccGTTTTTTAGAAGCGGTTACGCATTTATGGTAATCTAGTGAATAGATTATTAGATAGGGTGGTGGCTAACCGTGGCAtt > 2:1126700‑M1/58‑135 (MQ=255) tagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccGTTTTTTAGAAGCGGTTACGCATTTATGGTAATCTAGTGAATAGATTATTAGATAGGGTGGTGGCTAACCGTGGCAt > 1:56762‑M1/58‑134 (MQ=255) tagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccGTTTTTTAGAAGCGGTTACGCATTTATGGTAATCTAGTGAATAGATTATTAGATAGGGTGGTGGCTAACCGTGGCAt > 1:2233331‑M1/58‑134 (MQ=255) catattatatgtacgaaggcatttcatttacacaagattcttgacgctaccGTTTTTTAGAAGCGGTTACGCATTTATGGTAATCTAGTGAATAGATTATTAGATAGGGTGGTGGCTAACCGTGGCATTCTTTg < 1:1106040‑M1/83‑1 (MQ=255) catattatatgtacgaaggcatttcatttacacaagattcttgacgctaccGTTTTTTAGAAGCGGTTACGCATTTATGGTAATCTAGTGAATAGATTATTAGATAGGGTGGTGGCTAACCGTGGCATTCTTTGGc > 1:731622‑M1/52‑136 (MQ=255) aatattatatttacgaaggcatttcatttacacaagattcttgtctctaccTTTTTTTAGAAGCGGTTACGCATTTTTGGTAATCTAGTGAATAGATTATTAGATAGGGTGGTGGCTAACCGTGGCATTCTTTGGc > 2:1331723‑M1/52‑136 (MQ=255) ttatatgtacgaaggcatttcatttacacaagattcttgacgctaccGTTTTTTAGAAGCGGTTACGCATTTATGGTAATCTAGTGAATAGATTATTAGATAGGGTGGTGGCTAACCGTGGCATTCTTTGGCtata > 1:2215514‑M1/48‑136 (MQ=255) tatatgtacgaaggcatttcatttacacaagattcttgacgctaccGTTTTTTAGAAGCGGTTACGCATTTATGGTAATCTAGTGAATAGATTATTAGATAGGGTGGTGGCTAACCGTGGCATTCTTTGGCTATaa > 2:70002‑M1/47‑136 (MQ=255) tatatgtacgaaggcatttcatttacacaagattcttgacgctaccGTTTTTTAGAAGCGGTTACGCATTTATGGTAATCTAGTGAATAGATTATTAGATAGGGTGGTGGCTAACCGTGGCATTCTTTGGCTATaa < 2:1750649‑M1/90‑1 (MQ=255) atatgtacgaaggcatttcatttacacaagattcttgacgctaccGTTTTTTAGAAGCGGTTACGCATTTATGGTAATCTAGTGAATAGATTATTAGATAGGGTGGTGGCTAACCGTGGCATTCTTTGGCTATAAg < 1:1662928‑M1/91‑1 (MQ=255) gtacgaaggcatttcatttacacaagattcttgacgctaccGTTTTTTAGAAGCGGTTACGCATTTATGGTAATCTAGTGAATAGATTATTAGATAGGGTGGTGGCTAACCGTGGCATTCttt < 2:1634327‑M1/82‑1 (MQ=255) gtacgaaggcatttcatttacacaagattcttgacgctaccGTTTTTTAGAAGCGGTTACGCATTTATGGTAATCTAGTGAATAGATTATTAGATAGGGTGGTGGCTAACCGTGGCATTCTTTGGCTATAAGGata < 2:32040‑M1/95‑1 (MQ=255) gtacgaaggcatttcatttacacaagattcttgacgctaccGTTTTTTAGAAGCGGTTACGCATTTATGGTAATCTAGTGAATAGATTATTAGATAGGGTGGTGGCTAACCGTGGCATTCTTTGGCTATAAGGata < 2:2503987‑M1/95‑1 (MQ=255) gtacgaaggcatttcatttacacaagattcttgacgctaccGTTTTTTAGAAGCGGTTACGCATTTATGGTAATCTAGTGAATAGATTATTAGATAGGGTGGTGGCTAACCGTGGCATTCTTTGGCTATAAGGata < 1:1824669‑M1/95‑1 (MQ=255) gaaggcatttcatttacacaagattcttgacgctaccGTTTTTTAGAAGCGGTTACGCATTTATg < 1:194338‑M1/28‑1 (MQ=255) gaaggcatttcatttacacaagattcttgacgctaccGTTTTTTAGAAGCGGTTACGCATTTATGGTAATCTAGTGAATAGATTATTAGATAGGGTGGTGGCTAACCGTGGCATTCTTTGGCTATAAGGATATCGa < 2:1976050‑M1/99‑1 (MQ=255) gaaggcatttcatttacacaagattcttgacgctaccGTTTTTTAGAAGCGGTTACGCATTTATGGTAATCTAGTGAATAGATTATTAGATAGGGTGGTGGCTAACCGTGGCATTCTTTGGCTATAAGGATATCGa > 2:2781151‑M1/38‑136 (MQ=255) atttcatttacacaagattcttgacgctaccGTTTTTTAGAAGCGGTTACGCATTTATGGTAATCTAGTGAATAGATTATTAGATAGGGTGGTGGCTAACCGTGGCATTCTTTGGCTATAAGGATATCGAt < 2:963086‑M1/100‑1 (MQ=255) atttcatttacacaagattcttgacgctaccGTTTTTTAGAAGCGGTTACGCATTTATGGTAATCTAGTGAATAGATTATTAGATAGGGTGGTGGCTAACCGTGGCATTCTTTGGCTATAAGGATATCGAt > 1:963086‑M1/32‑131 (MQ=255) atttcatttacacaagattcttgacgctaccGTTTTTTAGAAGCGGTTACGCATTTATGGTAATCTAGTGAATAGATTATTAGATAGGGTGGTGGCTAACCGTGGCATTCTTTGGCTATAAGGATATCGATAAGtt < 2:2710461‑M1/105‑1 (MQ=255) atttcatttacacaagattcttgacgctaccGTTTTTTAGAAGCGGTTACGCATTTATGGTAATCTAGTGAATAGATTATTAGATAGGGTGGTGGCTAACCGTGGCATTCTTTGGCTATAAGGATATCGATAAGt > 1:2708655‑M1/32‑135 (MQ=255) atttcatttacacaagattcttgacgctaccGTTTTTTAGAAGCGGTTACGCATTTATGGTAATCTAGTGAATAGATTATTAGATAGGGTGGTGGCTAACCGTGGCATTCTTTGGCTATAAGGATATCGATAAGt > 1:2770733‑M1/32‑135 (MQ=255) catttacacaagattcttgacgctaccGTTTTTTAGAAGCGGTTACGCATTTATGGTAATCTAGTGAATAGATTATTAGATAGGGTGGTGGCTAACCGTGGCATTCTTTGGCTATAAGGATATCGATAAGTTATCt > 2:2599817‑M1/28‑136 (MQ=255) catttacacaagattcttgacgctaccGTTTTTTAGAAGCGGTTACGCATTTATGGTAATCTAGTGAATAGATTATTAGATAGGGTGGTGGCTAACCGTGGCATTCTTTGGCTATAAGGATATCGATAAGTTATCt > 1:2820438‑M1/28‑136 (MQ=255) acaagattcttgacgctaccGTTTTTTAGAAGCGGTTACGCATTTATGGTAATCTAGTGAATAGATTATTAGATAGGGTGGTGGCTAACCGTGGCATTCTTTGGCTATAAGGATATCGATAAGTTATCTGGAGTAg < 1:628346‑M1/116‑1 (MQ=255) tcttgacgctaccGTTTTTTAGAAGCGGTTACGCATTTATGGTAATCTAGTGAATAGATTATTAGATAGGGTGGTGGCTAACCGTGGCATTCTTTGGCTATAAGGATATCGATAAGTTATCTGGAGTAGATTTAGc < 2:1957335‑M1/123‑1 (MQ=255) tgacgctaccGTTTTTTAGAAGCGGTTACGCATTTATGGTAATCTAGTGAATAGATTATTAGATAGGGTGGTGGCTAACCGTGGCATTCTTTGGCTATAAGGATATCGATAAGTTATCTGGAGTAGATTTAGCAAt > 1:1796457‑M1/11‑136 (MQ=255) acgctaccGTTTTTTAGAAGCGGTTACGCATTTATGGTAATCTAGTGAATAGATTATTAGATAGGGTGGTGGCTAACCGTGGCATTCTTTGGCTATaa < 2:1294684‑M1/90‑1 (MQ=255) taccGTTTTTTAGAAGCGGTTACGCATTTATGGTAATCTAGTGAATAGATTATTAGATAGGGTGGTGGCTAACCGTGGCATTCTTTGGCTATAAGGATATCGATAAGTTATCTGGAGTAGATTTAGCAATTTATc > 1:700268‑M1/5‑135 (MQ=255) taccGTTTTTTAGAAGCGGTTACGCATTTATGGTAATCTAGTGAATAGATTATTAGATAGGGTGGTGGCTAACCGTGGCATTCTTTGGCTATAAGGATATCGATAAGTTATCTGGAGTAGATTTAGCAATTTATCg > 1:2503987‑M1/5‑136 (MQ=255) gaccGTTTTTTAGAAGCGGTTACGCATTTATGGTAATCTAGTGAATAGATTATTAGATAGGGTGGTGGCTAACCGTGGCATTCTTTGGCTATAAGGATATCGATAAGTTATCTGGAGTAGATTTAGCAATTTATc > 1:1193643‑M1/5‑135 (MQ=255) accGTTTTTTAGAAGCGGTTACGCATTTATGGTAATCTAGTGAATAGATTATTAGATAGGGTGGTGGCTAACCGTGGCATTCTTTGGCTATAAGGATATCGATAAGTTATCTGGAGTAGATTTAGCAATTTATCGa < 1:1269526‑M1/133‑1 (MQ=255) ccGTTTTTTAGAAGCGGTTACGCATTTATGGTAATCTAGTGAATAGATTATTAGATAGGGTGGTGGCTAACCGTGGCATTCTTTGGCTATAAGGATATCGATAAGTTATCTGGAGTAGATTTAGCAATTTATCGAt > 2:442787‑M1/3‑136 (MQ=255) ccGTTTTTTAGAAGCGGTTACGCATTTATGGTAATCTAGTGAATAGATTATTAGATAGGGTGGTGGCTAACCGTGGCATTCTTTGGCTATAAGGATATCGATAAGTTATCTGGAGTAGATTTAGCAATTTATCGAt > 2:1824669‑M1/3‑136 (MQ=255) cGTTTTTTAGAAGCGGTTACGCATTTATGGTAATCTAGTGAATAGATTATTAGATAGGGTGGTGGCTAACCGTGGCATTCTTTGGCTATAAGGATATCGATAAGTTATCTGGAGTAGATTTAGCAATTTATCGAtt < 1:992734‑M1/135‑1 (MQ=255) cGTTTTTTAGAAGCGGTTACGCATTTATGGTAATCTAGTGAATAGATTATTAGATAGGGTGGTGGCTAACCGTGGCATTCTTTGGCTATAAGGATATCGATAAGTTATCTGGAGTAGATTTAGCAATTTATCGAtt < 2:1675528‑M1/135‑1 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTTTTTTAGAAGCGGTTACGCATTTATGGTAATCTAGTGAATAGATTATTAGATAGGGTGGTGGCTAACCGTGGCATTCTTTGGCTATAAGGATATCGATAAGTTATCTGGAGTAGATTTAGCAATTTATCGATTT > TrimmedAssembly_T66_contig_15/1‑136 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |