| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | TrimmedAssembly_T66_contig_12 | 1 = | 0 (0.000) | 107 (0.300) +ATGGCAACGTCCTACCCTCGCAGGGAGCGATCCCCCAACTACTCTCGGCGCTAAGAAGCTT |
29/138 | 0.7 | 100% | intergenic (–/‑8) | –/rasttk_feature_creation_tool=tRNAscan‑SE | –/tRNA‑Asn‑GTT |
| ? | TrimmedAssembly_T66_contig_28 | 1 = | 0 (0.000) | intergenic (–/+125) | –/rasttk_feature_creation_tool=RNA_reps_LSU_rRNA | –/LSU rRNA ## 23S rRNA, large subunit ribosomal RNA | |||||
Only 100 of 845 total aligned reads displayed.
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCAAATATCTTCATATGAACCGGAACACCAATTACTTGGTTAAGT > TrimmedAssembly_T66_contig_28/1‑135 | cgaaccgtcgacatcttgattaacagtcaagcgctctaccaactgagctatgtcggaataatcgtatggcaacgtcctaccctcgcagggagcgatcccccaactactctcggcgctaagaagcttAACTTCtgtg < 2:2409817‑M2/10‑1 (MQ=255) accgtcgacatcttgattaacagtcaagcgctctaccaactgagctatgtcggaataatcgtatggcaacgtcctaccctcgcagggagcgatcccccaactactctcggcgctaagaagcttAACTTCTGTGTTc < 2:466774‑M2/13‑1 (MQ=255) accgtcgacatcttgattaacagtcaagcgctctaccaactgagctatgtcggaataatcgcatggcaacgtcctaccctcgcagggagcgatcccccaactactctcggcgccaagaagcttAACTTCTGTGTTc > 1:89742‑M1/124‑136 (MQ=255) gtcgacatcttgattaacagtcaagcgctctaccaactgagctatgtcggaataatcgcatggcaacgtcctaccctcgcagggagcgatcccccaactactctcggcgccaagaagcttAACTTCTGTGTTCGAc < 2:571239‑M1/16‑1 (MQ=255) acatcttgattaacagtcaagcgctctaccaactgagctatgtcggaataatcgtatggcaacgtcctaccctcgcagggagcgatcccccaactactctcggcgctaagaagcttAACTTCTGTGTTCGACATgg > 2:2112690‑M2/117‑136 (MQ=255) catcttgattaacagtcaagcgctctaccaactgagctatgtcggaataatcgtatggcaacgtcctaccctcgcagggagcgatcccccaactactctcggcgctaagaagcttAACTTCTGTGTTCGACATgg < 1:320927‑M2/20‑1 (MQ=255) cgctctaccaactgagctatgtcggaataatcgcatggcaacgtcctaccctcgcagggagcgatcccccaactactctcggcgccaagaagcttAACTTCTGTGTTc > 2:372680‑M1/96‑108 (MQ=255) gctctaccaactgagctatgtcggaataatcgcatggcaacgtcctaccctcgcagggagcgatcccccaactactctcggcgccaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGc > 1:1065830‑M1/95‑135 (MQ=255) gctctaccaactgagctatgtcggaataatcgcatggcaacgtcctaccctcgcagggagcgatcccccaactactctcggcgccaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGc > 2:1062611‑M1/95‑135 (MQ=255) gctctaccaactgagctatgtcggaataatcgcatggcaacgtcctaccctcgcagggagcgatcccccaactactctcggcgccaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGc > 2:1654577‑M1/95‑135 (MQ=255) tctaccaactgagctatgtcggaataatcgcatggcaacgtcctaccctcgcagggagcgatcccccaactactctcggcgccaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCAt > 1:563304‑M1/93‑136 (MQ=255) tctaccaactgagctatgtcggaataatcgcatggcaacgtcctaccctcgcagggagcgatcccccaactactctcggcgccaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCAt > 2:297054‑M1/93‑136 (MQ=255) tctaccaactgagatatgtcggaataatcgcatggcaacgtcctaccctcgcagggagcgatcccccaactactctcggcgccaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCAt > 2:2818793‑M1/93‑136 (MQ=255) taccaactgagctatgtcggaataatcgtatggcaacgtcctaccctcgcagggagcgatcccccaactactctcggcgctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCg < 2:2002943‑M2/46‑1 (MQ=255) taccaactgagctatgtcggaataatcgcatggcaacgtcctaccctcgcagggagcgatcccccaactactctcggcgccaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCg > 2:1934630‑M1/91‑136 (MQ=255) caactgagctatgtcggaataatcgtatggcaacgtcctaccctcgcagggagcgatcccccaactactctcggcgctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTc > 1:648203‑M2/88‑135 (MQ=255) actgagctatgtcggaataatcgcatggcaacgtcctaccctcgcagggagcgatcccccaactactctcggcgccaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTcacc > 1:1793988‑M1/86‑136 (MQ=255) atgtcggaataatcgtatggcaacgtcctaccctcgcagggagcgatcccccaactactctcggcgctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTAtt > 1:1109559‑M2/78‑136 (MQ=255) gaataatcgcatggcaacgtcctaccctcgcagggagcgatcccccaactactctcggcgccaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGaa < 1:100105‑M1/64‑1 (MQ=255) gaataatcgcatggcaacgtcctaccctcgcagggagcgatcccccaactactctcggcgccaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGaa < 1:271881‑M1/64‑1 (MQ=255) taatcgcatggcaacgtcctaccctcgcagggagcgatcccccaactactctcggcgccaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACtt < 1:2664163‑M1/68‑1 (MQ=255) atttcgcatggcgacgtcctaccctcgcagggagcgatcccccaactactctcggcgctaagaagcttAACTTCTGTGTTCGACATgg > 1:2517211‑M1/69‑88 (MQ=255) atttcgcatggcaacgtcctaccctcgcagggagcgatcccccaactactctcggcgctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCATCACCACACTAT‑GTGAAactaa < 1:358470‑M1/68‑3 (MQ=255) tgcatggcaacgtcctaccctcgcagggagcgatcccccaactactctcggcgctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGc < 2:2517981‑M2/72‑1 (MQ=255) gtatggcaacgtcctaccctcgcagggagcgatcccccaactactctcggcgctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGc > 1:2396428‑M2/64‑135 (MQ=255) gtatggcaacgtcctaccctcgcagggagcgatcccccaactactctcggcgctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGc > 2:2192038‑M2/64‑135 (MQ=255) ggcaacgtcctaccctcgcagggagcgatcccccaactactctcggcgctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCa > 2:135439‑M2/60‑136 (MQ=255) ggcaacgtcctaccctcgcagggagcgatcccccaactactctcggcgccaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCa > 1:1503935‑M1/60‑136 (MQ=255) cgtcctaccctcgcagggagcgatcccccaactactctcggcgctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACt > 2:521369‑M2/55‑136 (MQ=255) cgtcctaccctcgcagggagcgatcccccaactactctcggcgctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACt < 1:999647‑M2/82‑1 (MQ=255) cgtcctaccctcgcagggagcgatcccccaactactctcggcgctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACt > 2:918504‑M2/55‑136 (MQ=255) cgtcctaccctcgcagggagcgatcccccaactactctcggcgctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACt > 1:1473829‑M2/55‑136 (MQ=255) cctcgcagggagcgatcccccaactactctcggcgctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAata > 1:2083788‑M2/47‑136 (MQ=255) ctcgcagggagcgatcccccaactactctcggcgctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAatat < 1:774094‑M2/91‑1 (MQ=255) agggagcgatcccccaactactctcggcgctaagaagcttAACTTCTGTGTTCGACAt < 2:1395728‑M2/18‑1 (MQ=255) agggagcgatcccccaactactctcggcgctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTca < 1:432921‑M2/49‑1 (MQ=255) agggagcgatcccccaactactctcggcgctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCAAat > 1:1887836‑M2/41‑136 (MQ=255) agggagcgatcccccaactactctcggcgctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCAAat > 1:2613069‑M2/41‑136 (MQ=255) agggagcgatcccccaactactctcggcgctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCAAat > 2:894162‑M2/41‑136 (MQ=255) agggagcgatcccccaactactctcggcgctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCAAat > 1:1378328‑M2/41‑136 (MQ=255) agggagcgatcccccaactactctcggcgctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTGCTCGCCATCGTCACCACACTATTGAGAACCTTGTGCTCTCCAAACGAGACAATATCAAat > 2:150574‑M2/41‑136 (MQ=255) gggagcgatccccccactactctcggcgctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGTGAAACTTGTGCTCTCAAAACTAGACAATATCAGata > 1:2445586‑M2/40‑136 (MQ=255) gggagcgatcccccaactactctcggcgctaagaagcttAACTTCtgt < 1:473594‑M2/9‑1 (MQ=255) gggagcgatcccccaactactctcggcgctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTAt < 1:1925009‑M2/58‑1 (MQ=255) gggagcgatcccccaactactctcggcgctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACACTATCAAata > 2:1887997‑M2/40‑136 (MQ=255) gggagcgatcccccaactactctcggcgctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCAAata > 2:2615597‑M2/40‑136 (MQ=255) gggagcgatcccccaactactctcggcgctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCAAata > 1:1564705‑M2/40‑136 (MQ=255) gggagcgatcccccaactactctcggcgctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCAAata > 1:1419384‑M2/40‑136 (MQ=255) gggagcgatcccccaactactctcggcgctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCAAata > 2:611954‑M2/40‑136 (MQ=255) gggagcgatcccccaactactctcggcgctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCAAata > 1:944340‑M2/40‑136 (MQ=255) gggagcgatcccccaactactctcggcgctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCAAata > 2:1435287‑M2/40‑136 (MQ=255) gggagcgatcccccaactactctcggcgccaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTca > 1:871697‑M1/40‑88 (MQ=255) gggagcgatcccccaactactctcggcgccaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACt < 1:670518‑M1/82‑1 (MQ=255) gggagcgatcccccaactactctcggcgccaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACt > 2:670518‑M1/40‑121 (MQ=255) gggagcgatcccccaactactctcggcgccaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCAAata < 1:2329285‑M1/97‑1 (MQ=255) ggagcgatcccccaactactctcggcgctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCAAata > 1:1587305‑M2/39‑135 (MQ=255) gagcgatcccccaactactctcggcgctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCAAatat < 1:1144190‑M2/98‑1 (MQ=255) gagcgatcccccaactactctcggagctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATAGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCAAat < 1:1853843‑M2/96‑1 (MQ=255) cgatcccccaactactctcggcgccaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCAAATATCTTc < 1:2480894‑M1/102‑1 (MQ=255) gatcccccaactactctcggcgctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCAAATATCTTc < 1:2240524‑M2/102‑1 (MQ=255) gatcccccaactactctcggcgccaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCAAATATCTTCa < 1:1815439‑M1/103‑1 (MQ=255) tcccccaactactctcggcgctaagaagcttAACTTCTGTGTTCGACATgg > 1:84268‑M2/32‑51 (MQ=255) tcccccaactactctcggcgctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCAAATATCTTCat < 2:1251153‑M2/104‑1 (MQ=255) ccccaactactctcggcgctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCAAATATCTTCATATg > 1:608733‑M2/30‑136 (MQ=255) ccccaactactctcggcgctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCAAATATCTTCATATg > 2:1111648‑M2/30‑136 (MQ=255) ccccaactactctcggcgctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCAAATATCTTCATATg > 2:1164080‑M2/30‑136 (MQ=255) aactactctcggcgctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCAAATATCTTCATATGAAcc < 2:118800‑M2/111‑1 (MQ=255) aactactctcggcgccaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCAAATATCTTCATATGAAcc > 2:1333130‑M1/26‑136 (MQ=255) ctactctcggcgctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCAAATATCTTCATATGAACCgg > 1:2155913‑M2/24‑136 (MQ=255) ctactctcggcgctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCAAATATCTTCATATGAACCgg > 1:499866‑M2/24‑136 (MQ=255) ctactctcggcgccaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCAAATATCTTCATATGAACCgg < 2:2307549‑M1/113‑1 (MQ=255) actctcggcgctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCAAATATCTTCATATGAACCGGa > 1:1222648‑M2/22‑135 (MQ=255) actctcggcgccaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCAAATATCTTCATATGAACCGGa < 2:320625‑M1/114‑1 (MQ=255) ctctcggcgctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCAAATATCTTCATATGAACCGGAac < 2:1779570‑M2/116‑1 (MQ=255) ctctcggcgctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCAAATATCTTCATATGAACCGGAac < 1:279100‑M2/116‑1 (MQ=255) cggcgctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGc > 2:2757822‑M2/17‑57 (MQ=255) cggcgctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGc > 2:2447049‑M2/17‑88 (MQ=255) ggcgccaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAg < 1:1395656‑M1/84‑1 (MQ=255) gcgctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCAAATATCTTCATATGAACCGGAACACCAAt > 1:2295135‑M2/15‑136 (MQ=255) gcgctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCAAATATCTTCATATGAACCGGAACACCAAt > 2:1576909‑M2/15‑136 (MQ=255) gcgccaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCAAATATCTTCATATGAACCGGAACACCAAt < 2:2055486‑M1/122‑1 (MQ=255) cgctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCAAATATCTTCATATGAACCGGAACACCAAt < 2:1285908‑M2/122‑1 (MQ=255) cgctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCAAATATCTTCATATGAACCGGAACACCAAt < 1:1718397‑M2/122‑1 (MQ=255) gctaagaagcttAACTTCTGTGTTCGACATGGGAACAGgt < 1:1174821‑M2/28‑1 (MQ=255) gctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATcc > 2:784535‑M2/13‑46 (MQ=255) gctaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCAAATATCTTCATATGAACCGGAACACCAAtt > 1:2188688‑M2/13‑135 (MQ=255) gccaagaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCAAATATCTTCATATGAACCGGAACACCAAtt < 2:716672‑M1/123‑1 (MQ=255) gccaagaagctgAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCAAATATCTTCATATGAACCGGAACACCAAtt < 1:1627364‑M1/123‑1 (MQ=255) agaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCAAATATCTTCATATGAACCGGAACACCAATTACTTg > 2:822826‑M1/9‑136 (MQ=255) agaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCAAATATCTTCATATGAACCGGAACACCAATTACTTg > 2:2508487‑M1/9‑136 (MQ=255) agaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCAAATATCTTCATATGAACCGGAACACCAATTACTTg > 1:1985294‑M1/9‑136 (MQ=255) agaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCAAATATCTTCATATGAACCGGAACACCAATTACTTg > 1:711900‑M1/9‑136 (MQ=255) agaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCAAATATCTTCATATGAACCGGAACACCAATTACTTg > 2:1813358‑M1/9‑136 (MQ=255) agaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCAAATATCTTCATATGAACCGGAACACCAATTACTTg > 2:1741212‑M1/9‑136 (MQ=255) agaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCAAATATCTTCATATGAACCGGAACACCAATTACTTg > 1:2022018‑M1/9‑136 (MQ=255) agaagcttAACTTCTGTGTTAGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAATACTAGACAATATCAAATATCTTCATATGAACCGGAACACCAATTACTTg > 2:2348389‑M1/9‑136 (MQ=255) gaagcttAACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACt < 2:2251543‑M1/67‑1 (MQ=255) aaCTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCAAATATCTTCATATGAAcc > 2:2666692/1‑111 (MQ=255) aaCTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCAAATATCTTCATATGAACCGGAACACCAATTACTTGGTTAAGt > 1:1316864/1‑135 (MQ=255) aaCTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCAAATATCTTCATATGAACCGGAACACCAATTACTTGGTTAAGt > 1:287234/1‑135 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AACTTCTGTGTTCGACATGGGAACAGGTGTATCCTTCTCGCCATCGTCACCACACTATTGAGAAACTTGTGCTCTCAAAACTAGACAATATCAAATATCTTCATATGAACCGGAACACCAATTACTTGGTTAAGT > TrimmedAssembly_T66_contig_28/1‑135 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |