| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Annotation_U21_Trimmed_contig_1 | = 50 | 103 (0.330) | 53 (1.110) +AGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACAAGCTGCAACTAGC |
9/42 | 0.9 | 72.2% | coding (50/567 nt) | rasttk_feature_annotation_tool=annotate_proteins_km er_v2 | hypothetical protein |
| ? | Annotation_U21_Trimmed_contig_1 | 76 = | 160 (0.520) | coding (76/567 nt) | rasttk_feature_annotation_tool=annotate_proteins_km er_v2 | hypothetical protein | |||||
Only 100 of 249 total aligned reads displayed.
‑‑‑AGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Annotation_U21_Trimmed_contig_1/1‑50‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTAGCACCATCAAGC > Annotation_U21_Trimmed_contig_1/76‑90 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ccaAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGC < 2:1563228/132‑1ccaAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGC < 1:1224333/132‑1 caAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGag > 2:1017322/3‑133 aAGTTCAGCTTTATGTTCAGCTTCTAGATCAGTTGCACCTTCAAGTAGTGCAGTAACATCACAAGCTGAAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTAAGTTGCACCATCAAGTAGCGC < 2:2382961/134‑1 aAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGC < 1:1030946/134‑1 aAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGC < 2:1670873/134‑1 aAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGC < 1:2254163/134‑1 aAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGC < 1:1049251/134‑1 AGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCA < 2:2179373/135‑1 GTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAG < 1:1167964/135‑1 TCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTa > 2:398840/1‑134 TCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGT > 2:2261397/1‑134 TCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGT > 2:2203051/1‑134 TCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGC > 1:1970337/1‑116 TCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGAATCATCAGCTTCAAGCTCAGTTGCACCATCAAGTAGAGCAGT > 2:2325094/1‑134 TCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACAAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGT > 1:131616/1‑134 TCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGC < 2:540505/65‑1 TCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCAG > 2:1665161/1‑49 CTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCAGTAACAT < 2:1386444/135‑1 TGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACAT > 2:1707085/1‑134 TGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACAT > 1:750589/1‑134 TGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGGTGCACCATCAAGTAGCGCCGTGACAT > 2:889826/1‑134 TATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCAC > 1:2091597/1‑135 TATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCAC < 1:2203051/135‑1 TCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACAA < 1:794838/135‑1 TCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACAA < 1:2261397/135‑1 CATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGAGCAGTGACATCACA > 2:199685/1‑133 CATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGT > 1:1361794/1‑74 TCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCCGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGGATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTCACATCACAAGC > 2:836803/1‑134 TCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCATGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACAAGC > 1:1673383/1‑134 TCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACAAGC > 1:516078/1‑134 TCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACAAGC > 2:654751/1‑134 TCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGC > 2:2306546/1‑92 AGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACAAGCTGC < 1:2362846/135‑1 AGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACAAGCTGC < 1:2669998/135‑1 AGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACAAGCTGC < 1:2763/135‑1 AGCTCCAAGCGAAGTTGCACCATCAAGCAGTGCAGTAACATCACAAGCTGAATCTAGCGTAGCACCAAGTTCAGCTGTATCATCCGCTGCAATCTCAGTTGCACCATCAAGTAGCGCAGTGACATAACAAGCTGC < 1:939759/135‑1 GCTGCAAGCTCAGTTGCACCATCAAGTAGTGCCGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGGTGCACCATCAAGGAGAGCAGTGACATCACAAGCTGC > 2:2650612/1‑134 GCTGCAAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACAAGCTGC > 2:741631/1‑134 TGCAAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGC > 1:373268/1‑114 TGCAAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACAAGCTGCAAC > 1:1253727/1‑135 TGCAAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACAAGCTGCAAC > 2:2683483/1‑135 TGCAAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGGTGCACCATCAAGTAGAGCAGTGACATCACAAGCTGCAAC > 2:291189/1‑135 TGCAAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGC < 2:1899555/72‑1 CAAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACAAGCTGCAACTA < 1:2396955/135‑1 CAAGCTCAGGTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACAAGCTGCAACTA < 2:1921379/135‑1 AAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACAAGCTGCAACTAG > 2:733237/1‑135 AAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACAAGCTGCAACTAG > 1:2168661/1‑135 AAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAG > 1:457746/1‑92 AAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAG > 1:1813422/1‑80 AAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGAAACTAGAGTAGCACCAAGTTCAGCTGGATCATCAGCTGCAAGATCAGATGCACCATCAAGTAGTGCAGTCAAATCTCACGCTGCGACTAG > 2:44912/1‑135 AGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACAAGCTGCAACTAGC < 1:305793/135‑1 AGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACAAGCTGCAACTAGC < 2:1819992/135‑1 AGCTCACGTGAAACATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTTCAAGCTCAGTTGCACCATCAAGTAGCGCAGTTACATCACAAGCTGCAACTAGC < 1:901088/135‑1 GCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGt < 1:1941007/43‑2 GCTCAGTTGCACCATCAAGTAGAGAAGTAACATCACAAGCTGCAACTAGCGAAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGATGCACCATCAAGTAGAGCAGAGACATCACAAGCTGAAACAAGCG > 2:1878372/1‑135 TCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACAAGCTGCAACTAGCGT > 1:2351772/1‑134 CAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACAAGCTGCAACTAGCGTA < 1:1546719/134‑1 CAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACAAGCTGCAACTAGCGTA < 1:1076497/134‑1 AGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGTAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACAAGCTGCAACTAGCGTAGC < 2:2239336/135‑1 AGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACAAGCTGCAACTAGCGTAGC < 1:1334208/135‑1 AGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACAAGCTGCAACTAGCGTAGC < 1:2473601/135‑1 AGTTGCACCATCAAGCAGAGCAGTTACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGC < 2:1502429/135‑1 TGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACAAGCTGCAACTAGCGTAGCACC > 1:2462118/1‑135 TGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGC > 2:109559/1‑75 TGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGC < 1:109648/75‑1 CACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACAAGCTGCAACTAGCGTAGCACCAa < 2:76204/135‑2 aCATCAAGAAGTGCAGTTACATCACTATCTGCAACTAGCGTATCACCAAGTTAAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACAAGCTGCAACTAGCGTAGCACCAagt < 2:679032/134‑4 CATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACAAGCTGCAACTAGCGTAGCACCATgtt > 1:1651006/1‑132 ATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCGGTGACATCACAAGCTGAAACTAGAGTAGCACCATCAtc > 2:2091505/1‑133 TCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACAAGCTGCAACTAGCGTAGCACCAagttca < 2:2351817/135‑7 TCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTT < 2:2406994/78‑1 TCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCAACAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTTACATCACAAGCTGCAACTAGCGTAGCACCAagttca < 2:2489608/135‑7 AGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACAAGCTGCAACTAGCGTAGCACCAagttc > 1:1608620/1‑126 AGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACAAGCTGCAACTAGCGTAGCACCAagttc > 2:858938/1‑126 AGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACAAGCTGCAACTAGCGTAGCACCAagttc > 2:1291395/1‑126 AGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACAAGCTGCAACTAGCGTAGCACCAagttc > 2:553700/1‑126 AGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACAAGCTGAAACTAGCGTAGCACCAagttc > 2:591000/1‑126 AGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGGTGCACAATCAAGTAGCGCAGTGACATCACAAGCTGCAACTAGCGTAGCACCAagtaa > 2:1137233/1‑126 AGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAG > 2:1766540/1‑73 AGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAG > 2:2136470/1‑73 AGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAG < 1:2136470/73‑1 AGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTT > 2:1604648/1‑46 AGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGC > 1:1416230/1‑38 AGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACAAGCTGCAACTAGCGTAGCACCAa > 1:1000817/1‑118 AGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACAAGCTGCAACTAGCGTAGCACCAa < 2:1000817/119‑2 AGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACAA < 1:1775996/97‑1 AGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGC > 2:791430/1‑84 AGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAG < 2:2046882/65‑1 AGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGATCAG > 1:2046882/1‑65 AGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGC > 2:912645/1‑57 TAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACAAGCTGC < 2:305689/100‑1 TAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACAA > 1:661763/1‑95 TAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAG < 2:1194439/63‑1 TAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAG > 1:1194439/1‑63 TAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGC > 2:43284/1‑55 TCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACAAGCTGCAACTAGCGTAGCACC < 1:620814/110‑1 CAAGCTGTAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGAGCAGTGACATCACAAGCTGCAACTAGCGTAGC > 2:1338104/1‑104 ACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACAAGCTGC < 1:2215010/83‑1 ACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACAAGCTGC > 1:2406533/1‑72 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ‑‑‑AGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Annotation_U21_Trimmed_contig_1/1‑50‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTAGCACCATCAAGC > Annotation_U21_Trimmed_contig_1/76‑90 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |