| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Annotation_U21_Trimmed_contig_1 | = 50 | 103 (0.330) | 53 (1.110) +AGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACAAGCTGCAACTAGC |
9/42 | 0.9 | 72.2% | coding (50/567 nt) | rasttk_feature_annotation_tool=annotate_proteins_km er_v2 | hypothetical protein |
| ? | Annotation_U21_Trimmed_contig_1 | 76 = | 160 (0.520) | coding (76/567 nt) | rasttk_feature_annotation_tool=annotate_proteins_km er_v2 | hypothetical protein | |||||
Only 100 of 430 total aligned reads displayed.
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCTTCATATGCTACACATACTAGTTCAGCTGCAACAACTACTAACACAACCAATGTTGCTAGTTCAGCTGCATCATCAAGTGCTACAACAACAACTACTCAAA > Annotation_U21_Trimmed_contig_1/1‑205 | gctcagttgcaccatcaagtagcgcagtgacatcacaagctgcaactagcgtagcaccaAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAgtg > 2:1498293‑M1/60‑135 (MQ=255)gctcagttgcaccatcaagtagcgcagtgacatcacaagctgcaactagcgtagcaccaAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAgtg < 2:2232760‑M1/76‑1 (MQ=255)gctcagttgcaccatcaagtagcgcagtgacatcacaagctgcaactagcgtagcaccaAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAgtg < 1:845053‑M1/76‑1 (MQ=255) tcagttgcaccatcaagtagtgcagtaacatcacaagctgcaactagcgtagcaccaagttcagctgtatcatcagctgcaagctcagttgcaccatcaagtagcgcagtgacatcacaagctgcaactagcGt > 1:2351772‑M2/133‑134 (MQ=255) tcagttgcaccatcaagtagtgcagtaacatcacaagctgcaactagcgtagcaccaAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAGTGTa > 1:1409499‑M1/58‑135 (MQ=255) cagttgcaccatcaagtagtgcagtgacatcacaagctgcaactagcgtagcaccaAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAGTGTa > 2:2685505‑M1/57‑134 (MQ=255) cagttgcaccatcaagtagtgcagtaacatcacaagctgcaactagcgtagcaccaagttcagctgtatcatcagctgcaagctcagttgcaccatcaagtagcgcagtgacatcacaagctgcaactagcGTa < 1:623012‑M2/3‑1 (MQ=255) cagttgcaccatcaagtagtgcagtaacatcacaagctgcaactagcgtagcaccaagttcagctgtatcatcagctgcaagctcagttgcaccatcaagtagcgcagtgacatcacaagctgcaactagcGTa < 2:2168661‑M2/3‑1 (MQ=255) cagttgcaccatcaagtagcgcagtgacatcacaagctgcaactagcgtagcacccAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTa > 1:476898‑M1/57‑134 (MQ=255) cagttgcaccatcaagtagcgcagtgacatcacaagctgcaactagcgtagcaccaAGTTCCGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAGTGTa > 2:1651006‑M1/57‑134 (MQ=255) cagttgcaccatcaagtagcgcagtgacatcacaagctgcaactagcgtagcaccaAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAGTGTa > 1:1350308‑M1/57‑134 (MQ=255) cagttgcaccatcaagtagcgcagtgacatcacaagctgcaactagcgtagcaccaAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTa > 1:2167157‑M1/57‑134 (MQ=255) cagttgcaccatcaagtagcgcagtgacatcacaagctgcaactagcgtagcaccaAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTa > 1:588832‑M1/57‑134 (MQ=255) agttgcaccatcccggagcgcagtgacatcacaagctgcaactagcgtagcaccaAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCCTCAAGTAGTGCAGTAACATCACAAGCGGCAACTAGCGTAGc > 1:1740144‑M1/56‑135 (MQ=255) agttgcaccatcaattagcgcagtgacatcacaagctgcaactagcgtagcaccaAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAATTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGc > 1:1573177‑M1/56‑135 (MQ=255) agttgcaccatcaagtagtgcagtaacatcacaagctgcaactagcgtagcaccaagttcagctgtatcatcagctgcaagctcagttgcaccatcaagtagcgcagtgacatcacaagctgcaactagcGTAGc < 1:2473601‑M2/5‑1 (MQ=255) tgcaccatcaagtagtgcagtaacatcacaagctgcaactagcgtagcaccaagttcagctgtatcatcagctgcaagctcagttgcaccatcaagtagcgcagtgacatcacaagctgcaactagcGTAGCAcc > 1:1796959‑M2/128‑135 (MQ=255) tgcaccatcaagtagtgcagtaacatcacaagctgcaactagcgtagcaccaagttcagctgtatcatcagctgcaagctcagttgcaccatcaagtagcgcagtgacatcacaagctgcaactagcGTAGCAcc > 1:148870‑M2/128‑135 (MQ=255) tgcaccatcaagtagcgcagtgacatcacaagctgcaactagcgtagcaccaAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAGTGTAGCAcc < 1:1188689‑M1/83‑1 (MQ=255) tgcaccatcaagtagcgcagtgacatcacaagctgcaactagcgtagcaccaAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGTAACTAGCGTAGCAcc < 1:2567371‑M1/83‑1 (MQ=255) gcacctgcaagcagtgcagtaacatcacaagctgtaactagcgtagcaccaagttcagctgtatcatcagctgcaagctcagttgcaccatcaagtagtgcagtaacatcacaagctgcaactagcGTAGCAcc < 1:740624‑M2/8‑1 (MQ=255) gcaccatcaagtagtgcagtaacatcacaagctgcaactagcgtagcaccaagttcagctgtatcatcagctgcaagctcagttgcaccatcaagtagcgcagtgacatcacaagctgcaactagcGTAGCAcc < 2:1008007‑M2/8‑1 (MQ=255) caccatcaagtagtgcagtaacatcacaagctgcaactagcgtagcaccaagttcagctgtatcatcagctgcaagctcagttgcaccatcaagtagcgcagtgacatcacaagctgcaactagcGTAGCACcaa < 2:276926‑M2/10‑2 (MQ=255) caccatcaagtagtgcagtaacatcacaagctgcaactagcgtagcaccaagttcagctgtatcatcagctgcaagctcagttgcaccatcaagtagcgcagtgacatcacaagctgcaactagcGTAGCACcaa < 2:76204‑M2/10‑2 (MQ=255) caccatcaagtagcgcagtgacatcacaagctgcaactagcgtagcaccaAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACcaa > 2:1778211‑M1/51‑134 (MQ=255) caacataaagtagtgcagtaacatcacaagctgcaactagcgtagcaccaagttctgctgtatcatcagctgctagctcatttgcaacatctagtagcgcagttacatcacaagctgcaactagcGTAGCACcaa < 1:2371771‑M2/10‑2 (MQ=255) cctgcaagcagtgcagtaacatcacaagctgtaactagcgtagcaccaagttcagctgtatcatcagctgcaagctcagttgcaccatcaagtagcgcagtgacatcacaagctgcaactagcGTAGCACcaa < 1:1961491‑M2/10‑2 (MQ=255) ccatcaagtagcgcagtgacatcacaagctgcaactagcgtagcaccaAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAGTGTAGCACCATc > 1:2301319‑M1/49‑134 (MQ=255) acatcaagaagtgcagttacatcactatctgcaactagcgtatcaccaagttaagctgtatcatcagctgcaagctcagttgcaccatcaagtagcgcagtgacatcacaagctgcaactagcGTAGCaccaagt < 2:679032‑M2/12‑4 (MQ=255) ctgcaagcagtgcagtaacatcacaagctgtaactagcgtagcaccaagttcagctgtatcatcagctgcaagctcagttgcaccatcaagtagtgcagtaacatcacaagctgcaactagcGTAGcaccaagtt > 1:1386444‑M2/123‑131 (MQ=255) atcaagtagtgcagtaacatcacaagctgcaactagcgtagcaccaagttcagctgtatcatcagctgcaagctcagttgcaccatcaagtagcgcggtgacatcacaagctgaaactagaGTAGCACCAtcatc > 2:2091505‑M2/122‑133 (MQ=255) atcaagtagtgcagtaacatcacaagctgcaactagcgtagcaccaagttcagctgtatcatcagctgcaagctcagttgcaccatcaagtagcgcagtgacatcacaagctgcaactagcGTAgcaccaagttc < 1:1137233‑M2/14‑6 (MQ=255) tcaagtagtgcagtaacatcacaagctgcaactagcgtagcaccaagttcagctgtatcatcagctgcaagctcagttgcaccatcaagtagcgcagtgacatcacaagctgcaactagcGTagcaccaagttca < 1:2099827‑M2/15‑7 (MQ=255) tcaagtagtgcagtaacatcacaagctgcaactagcgtagcaccaAGTTCAGCTGTATCATCAGCTGCAAGCTCAGATGCACCATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAGTGTAGCACCATCAAg < 1:1257310‑M1/89‑1 (MQ=255) tcaagtagcgcagtgacatcacaagctgcaactagcgtagcaccaAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAgcaccaagttc < 1:2424735‑M1/89‑6 (MQ=255) agtagtgcagtaacatcacaagctgcaactagcgtagcaccaagttcagctgtatcatcagctgcaagctcagttgcaccatcaagtagcgcagtgacatcacaagctgcaactagcGTAgcaccaagttc > 2:1291395‑M2/118‑126 (MQ=255) agtagtgcagtaacatcacaagctgcaactagcgtagcaccaagttcagctgtatcatcagctgcaagctcagttgcaccatcaagtagcgcagtgacatcacaagctgcaactagcGTAgcaccaagttc > 1:1608620‑M2/118‑126 (MQ=255) agtagtgcagtaacatcacaagctgcaactagcgtagcaccaagttcagctgtatcatcagctgcaagctcagttgcaccatcaagtagcgcagtgacatcacaagctgcaactagcGTAgcaccaagttc > 2:321949‑M2/118‑126 (MQ=255) agtagcgcagtgacatcacaagctgcaactagcgtagcaccaAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCGGTAACATCACACGCTGTAACTAGTGTAGCACCATCAAgcgc < 2:2728663‑M1/92‑1 (MQ=255) agtagcgcagtgacatcacaagctgcaactagcgtagcaccaAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAGTGTAGCACCATCAAgcgc < 1:435690‑M1/92‑1 (MQ=255) agtagcgcagtgacatcacaagctgcaactagcgtagcaccaAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAGTGTAGCACCATCAAgcgc < 2:876047‑M1/92‑1 (MQ=255) agcagtgcagtaacatcacaagctgtaactagcgtagcaccaagttcagctgtatcatcagctgcaagctcagttgcaccatcaagtagtgcagtaacatcacaagctgcaactagcGTAgcaccaagttc > 2:2254163‑M2/118‑126 (MQ=255) agcagtgcagtaacatcacaagctgtaactagcgtagcaccaagttcagctgtatcatcagctgcaagctcagttgcaccatcaagtagtgcagtaacatcacaagctgcaactagcGTAgcaccaagttc > 2:1925624‑M2/118‑126 (MQ=255) gcgcagtgacatcacaagctgcaactagcgtagcaccaAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTa > 1:1235703‑M1/39‑135 (MQ=255) cagtgacatcacaagctgcaactagagtagcaccaAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACa > 1:222026‑M1/36‑134 (MQ=255) agtgacatcacaagctgcaactagcgtagcaccaAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACaa < 2:1862973‑M1/100‑1 (MQ=255) agtaacatcacaagctgcaactagcgtagcaccaagttcagctgtatcatcagctgcaagctcagttgcaccatcaagtagcgcagtgacatcacaagctgcaactagcGTAGCACcaa > 1:1000817‑M2/110‑118 (MQ=255) tgacatcacaagctgcaactagcgtagcaccaAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAAc < 2:1984033‑M1/101‑1 (MQ=255) acatcacaagctgcaactagcgtagcaccaAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTcc > 1:553700‑M1/31‑134 (MQ=255) catcacaagctgcaactagcgtagcaccaAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTcc < 2:606556‑M1/104‑1 (MQ=255) atcacaagctgcaactagcgtagcaccaAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCtt > 1:709298‑M1/29‑134 (MQ=255) atcacaagctgcaactagcgtagcaccaAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCTTc < 1:2129892‑M1/107‑1 (MQ=255) cacaagctgcaactagcgtagcaccaAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCTTCat > 2:516078‑M1/27‑135 (MQ=255) caagctgtaactagcgtagcaccaagttcagctgtatcatcagctgcaagctcagttgcaccatcaagtagtgcagtaacatcacaagctgcaactagcGTAGc < 1:1307870‑M2/5‑1 (MQ=255) caagctgcaactagcgtagcaccaagttcagctgtatcatcagctgcaagctcagttgcaccatcaagtagtgcagtaacatcacaagctgcaactagcGTAGc < 1:783789‑M2/5‑1 (MQ=255) tgcaactagcgtagcaccaAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAGTGTa < 1:1632523‑M1/78‑1 (MQ=255) tgcaactagcgtagcaccaAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCTTCATATGCTa < 2:2418118‑M1/115‑1 (MQ=255) caactagcgtagcaccaAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCTTCATATGCTacac < 1:2545099‑M1/118‑1 (MQ=255) actagcgtagcaccaAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCTTCATATGCTAcaca < 2:2352137‑M1/119‑1 (MQ=255) tagcgtagcaccaAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCTTCATATGCTACACATAc < 1:93806‑M1/122‑1 (MQ=255) agcaccaAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAGTGTa > 2:807892‑M1/8‑85 (MQ=255) agcaccaAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCTTCATATGCTACACATACTAGTTc < 2:2564974‑M1/128‑1 (MQ=255) tCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCGGTAACATCACAATCAGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCTTCATATGCTACACATACTAGTTCAGCTGcaac > 1:573297/1‑134 (MQ=255) tCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAGTGTa < 2:1718977/75‑1 (MQ=255) tCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCTTCATATGCTACACATACTAGTTCAGCTGcaac > 2:573175/1‑134 (MQ=255) tCAGCTGAATCAAAAGATGCAAGCTCAGTTGCACCATCAAGTAGAGCGGTAACATCACAAGATGTAACTACTGTAGCACCAACAAGCGCTGCTACTACTCCTTCATAAGATACACAAACTAGTTCAGCTGcaac > 1:1107241/1‑134 (MQ=255) aGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCTTCATATGCTACACATACTAGTTCAGCTGcaacaa < 1:1844668/134‑1 (MQ=255) tGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAGTGTAGCACCATCAAg < 2:1825346/81‑1 (MQ=255) tGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCTTCATATGCTACACATACTAGTTCAGCTGc < 2:84933/126‑1 (MQ=255) tGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCTTCATATGCTACACATACTAGTTCAGCTGCAACAactac > 2:381365/1‑135 (MQ=255) tATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCTTCATATGCTACACATACTAGTTCAGCTGCAACAactact > 2:1594956/1‑134 (MQ=255) catcaGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCTTCATATGCTACACATACTAGTTCAGCTGCTACAACTACTAaca > 2:1215753/1‑135 (MQ=255) gCTGCAAGCTCAGTTGCACCATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCTTCATATGCTACACATACTAGTTCAGCTGCAACAACTACTAACACAAcc > 1:362533/1‑135 (MQ=255) tGCAAGCTCAGTTGCACCATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCTTCATATGCTACACATACTAGTTCAGCTGCAACAACTACTAACACAACCaa > 2:944351/1‑135 (MQ=255) aaGCTCAGTTGCACCATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCTTCATATg < 2:1079953/89‑1 (MQ=255) aaGCTCAGTTGCACCATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCTTCATATGCTACACATACTAGTTCAGCTGCAACAACTACTAACACAACCAATGt > 2:435033/1‑135 (MQ=255) gCTCAGTTGCACCATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCTTCATATGCTACACATACTAGTTCAGCTGCAACAACTACTAACACAACCAATGt > 1:2049006/1‑133 (MQ=255) cAGTTGCACCATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCTTCATATGCTACACATACTAGTTCAGCTGCAACAACTACTAACACAACCAATGTTGc < 1:2698041/133‑1 (MQ=255) gCACCATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCTTCATATGCTACACATACTAGTTCAGCTGCAACAACTACTAACACAACCAATGTTGCTAGTTCa < 2:117707/135‑1 (MQ=255) ccATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCTTCATATGCTACACATACTAGTTCAGCTGCAACAACTACTAACACAACCAATGTTGCTAGTTCAGCt < 1:368952/135‑1 (MQ=255) aTCAAGTAGTGCGGTAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCTTCATATGCTACACATACTAGTTCAGCTGCAACAACTACTAACACAACCAATGTTGCTAGTTCAGCTGc > 1:664828/1‑135 (MQ=255) tCAAGTAGTGCGGTAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCTTCATATGCTACACATACTAGTTCAGCTGCAACAACTACTAACACAACCAATGTTGCTAGTTCAGCTGc > 1:1528206/1‑134 (MQ=255) tCAAGTAGTGCGGTAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCTTCATATGCTACACATACTAGTTCAGCTGCAACAACTACTAACACAACCAATGTTGCTAGTTCAGCTGc > 2:2643300/1‑134 (MQ=255) agtagtGCGGTAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCTTCATATGCTACACATACTAGTTCAGCTGCAACAACTACTAACACAACCAATGTTGCTAGTTCAGCTGcatca < 1:882253/135‑1 (MQ=255) agtagtGCGGTAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCTTCATATGCTACACATACTAGTTCAGCTGCAACAACTACTAACACAACCAATGTTGCTAGTTCAGCTGcatc > 2:723685/1‑134 (MQ=255) agtagtGCGGTAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCTTCATATGCTACACATACTAGTTCAGCTGCAACAACTACTAACACAACCAATGTTGCTAGTTCAGCTGcatc > 1:449249/1‑134 (MQ=255) gtGCGGTAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCTTCATATGCTACACATACTAGTTCAGCTGCAACAACTACTAACACAACCAATGTTGCTAGTTCAGCTGCatcatc < 1:2683483/133‑1 (MQ=255) ggTAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCTTCATATGCTACACATACTAGTTCAGCTGCAACAACTACTAACACAACCAATGt > 2:2051721/1‑108 (MQ=255) ggTAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCTTCATATGCTACACATACTAGTTCAGCTGCAACAACTACTAACACAACCAATGTTGCTAGTTCAGCTGCATCATCAAGTGc > 2:1365576/1‑135 (MQ=255) tAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCTTCATATGCTACACATACTAGTTCAGCTGCAACAACTACTAACACAACCAATGTTGCTAGTTCAGCTGCATCATCAAGTGCTa > 1:965116/1‑135 (MQ=255) tAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCTTCATATGCTACACATACTAGTTCAGCTGCAACAACTACTAACACAACCAATGTTGCTAGTTCAGCTGCATCATCAAGTGCTa > 1:259431/1‑135 (MQ=255) tAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCTTCATATGCTACACATACTAGTTCAGCTGCAACAACTACTAACACAACCAATGTTGCTAGTTCAGCTGCATCATCAAGTGCTa > 2:2379427/1‑135 (MQ=255) tAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCTTCATATGCTACACATACTAGTTCAGCTGCAACAACTACTAACACAACCAATGTTGCTAGTTCAGCTGCATCATCAAGTGCTa > 2:1426540/1‑135 (MQ=255) tAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCTTCATAAGCTACACATACTAGTTCAGCTGCAACAACTACTAACACAACCAATGTTGCTAGTTCAGCTGCATCATCAAGTGCTa > 1:1028240/1‑135 (MQ=255) aCATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCTTCATATGCTACACATACTAGTTCAGCTGCAACAACTACTAACACAACCAATGTTGCTAGTTCAGCTGCATCATCAAGTGCTac > 2:2508807/1‑134 (MQ=255) aCATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCTTCATATGCTACACATACTAGTTCAGCTGCAACAACTACTAACACAACCAATGTTGCTAGTTCAGCTGCATCATCAAGTGCTac < 2:1528206/134‑1 (MQ=255) cATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCTTCATATGCTACACATACTAGTTCAGCTGCAACAACTACTAACACAACCAATGTTGCTAGTTCAGCTGCATCATCAAGTGCTacaa > 1:1672939/1‑135 (MQ=255) caAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCTTCATATGCTACACATACTAGTTCAGCTGCAACAACTACTAACACAACCAATGTTGCTAGTTCAGCTGCATCATCAAGTGCTacaacaaca < 2:464575/135‑1 (MQ=255) gTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCTTCATATGCTACACATACTAGTTCAGCTGCAACAACTACTAACACAACCAATGTTGCTAGTTCAGCTGCATCATCAAGTGCTACAACAACAactact < 2:1253727/135‑1 (MQ=255) aCTAGTGTAGCACCATCAAGCGCTGCTACAACTCCGTCATATGCTACACATACTAGTTCAGCTGCAACAACTACTAACACAACCAATGTTGCTAGTTCAGCTGCATCATCAAGTGCTACAACAACAACTACTCaa > 1:297644/1‑135 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCTTCATATGCTACACATACTAGTTCAGCTGCAACAACTACTAACACAACCAATGTTGCTAGTTCAGCTGCATCATCAAGTGCTACAACAACAACTACTCAAA > Annotation_U21_Trimmed_contig_1/1‑205 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |