New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? Annotation_U21_Trimmed_contig_10 1 =0 (0.000)450 (0.470)
+GTTTATTCCGGCA		 62/230 0.5 84.4% noncoding (117/117 nt) rasttk_feature_creation_tool=RNA_reps_5S_rRNA 5S rRNA # 5S ribosomal RNA ‑ 3 prime truncation
?Annotation_U21_Trimmed_contig_12 = 910 185 (0.680)noncoding (8/73 nt) rasttk_feature_creation_tool=tRNAscan‑SE tRNA‑Lys‑TTT

Only 100 of 505 total aligned reads displayed.

TAAGTTAGCACAGAGTGTGGTGACGATAGTGAGAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  Annotation_U21_Trimmed_contig_10/132‑1
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TAGCTCAGTTGGTAGAGCATCTGACTTTTAATCAGAGGGTCGACAGTTCGAGCCTGTC  <  Annotation_U21_Trimmed_contig_12/910‑853
                                                                                                                                    |||||||||||||                                                          
TAAGTTAGCACAGAGTGTGGTGACGATAGTGAGAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTT                                                                      <  1:414110/135‑1
  AGTTAGCACAGAGTGTGGTGACGATAGTGAGAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTA                                                                    <  2:392148/135‑1
  AGTTAGCACAGAGTGTGGTGACGATAGTGAGAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTA                                                                    <  2:1158077/135‑1
     TAGCACAGAGTGTGGTGACGATAGTGAGAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTATTC                                                                 >  2:33522/1‑135
     TAGCACAGAGTGTGGTGACGATAGTGAGAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTATTC                                                                 >  2:196313/1‑135
       GCACAGAGTGTGGTGACGATAGTGAGAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTATTCCG                                                               <  2:1905770/135‑1
       GCACAGAGTGTGGTGACGATAGTGAGAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTATTCCG                                                               <  2:2119600/135‑1
       GCACAGAGTGTGGTGACGATAGTGAGAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCGTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTATTCCG                                                               <  2:288608/135‑1
               TGTGGTGACGATAGTGAGAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTATTCCGGCATAGCT                                                       >  1:1648608/1‑135
               TGTGGTGACGATAGTGAGAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTATTCCGGCAT                                                           <  2:2343659/131‑1
                GTGGTGACGATAGTGAGAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTATTCCGGCATAGCTC                                                      >  2:925639/1‑135
                GTGGTGACGATAGTGAGAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTATTCCGGCATAGCTC                                                      >  1:2457468/1‑135
                GTGGTGACGATAGTGAGAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTATTCCGGCATAGCTC                                                      >  2:1386711/1‑135
                GTGGTGACGATAGTGAGAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTATTCCGGCATAGCTC                                                      >  2:828806/1‑135
                GTGGTGACGATAGTGAGAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTATTCCGGCATAGCTC                                                      >  2:1661266/1‑135
                GTGGTGACGATAGTGAGAAGGATATACATGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCACCTGCGAGGGTAGGACGTTGCCATGCGTTTATTCCGGCATAGCTC                                                      >  2:149362/1‑135
                 TGGTGACGATAGTGAGAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTATTCCGGCATAGCTC                                                      <  1:1854496/134‑1
                    TGACGATAGTGAGAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTATTCCGGCATAGCTCAGTT                                                  >  1:1610692/1‑135
                      ACGATAGTGAGAAGGATCTACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTATTCCGGCATAGCTCAGTTG                                                 <  2:1246416/134‑1
                      ACGATAGTGAGAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTATTCCGGCATAGCTCAGTTGG                                                <  1:2561563/135‑1
                      ACGATAGTGAGAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTATTCCGGCATAGCTCAGTTG                                                 <  2:1610692/134‑1
                      ACGATAGTGAGAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTATTCCGGCATAGCTCAGTTG                                                 <  2:2430873/134‑1
                      ACGATAGTGAGAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTATTCCGGCATAGCTCAGTTG                                                 <  2:2478528/134‑1
                      ACGATAGTGAGAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTATTCCGGCATAGCTCAGTTG                                                 <  2:31746/134‑1
                      ACGATAGTGAGAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTATTCCGGCATAGCTCAGTTG                                                 <  2:667419/134‑1
                        GATAGTGAGAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTATTCCGGCATAGCTCAGTTGGTA                                              >  2:1785729/1‑135
                          TAGTGAGAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTATTCCGGCATAGCTCAGTTGGTAG                                             >  1:1215032/1‑134
                          TAGTGAGAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTATTCCGGCATAGCTCAGTTGGTAG                                             >  1:1752070/1‑134
                          TAGTGAGAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTATTCCGGCATAGCTCAGTTGGTAG                                             >  1:134104/1‑134
                          TAGTGAGAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTATTCCGGCATAGCTCAGTTGGTAG                                             >  1:1689496/1‑134
                            GTGAGAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTATTCCGGCATAGCTCAGTTGGTAGAGC                                          >  1:470520/1‑135
                            GTGAGAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTATTCCGGCATAGCTCAGTTGGTAGAGC                                          >  2:2008968/1‑135
                            GTGAGAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTATTCCGGCATAGCTCAGTTG                                                 <  2:1472269/128‑1
                            GTGAGAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTATTCCGGCATAGCTCA                                                     <  2:488706/124‑1
                            GTGAGAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTA                                                                    >  2:1592893/1‑109
                               AGAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTATTCCGGCATAGCTCAGTTGGTAGAGCATC                                       <  2:1331600/135‑1
                               AGAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTATTCCGGCATAGCTCAGTTGGTAGAGCA                                         <  1:847677/133‑1
                               AGAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTATTCCGGCATAGCTCAGTTGGTAGAGCA                                         <  1:2098539/133‑1
                               AGAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTATTCCGGCATAGCTCAGTTGGTAGAGCA                                         <  1:242980/133‑1
                               AGAAGGATAGACCTGTTCCCATGTCGAACACAGAATTCAAGCTTCTTAACGCCGAGAGGAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTATTCCGGCATAGCTCAGTTGGTAGAGCA                                         <  2:854091/133‑1
                                GAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTATTCCGGCATAGCTCAGTTGGTAGAGCATCT                                      >  2:64170/1‑135
                                GAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTATTC                                                                 <  1:1013950/108‑1
                                 acggcTATACCTGTTCCCATGTCGACCACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTATTCCGGCATAGCTCAGTTGGTAGAGCATCTG                                     <  2:2259361/130‑1
                                   cgcTATACCCGTTCCCCTGTCGAACACAGCCGACAAGCATCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTATTCCGGCATAGCACAGTTGGTAGAGCATCTG                                     <  2:1130453/130‑1
                                   GGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTATTCCGGCATAGCTCAGTTGGTAGAGCATCTG                                     <  2:442011/133‑1
                                       atcCCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTATTCCGGCATAGCTCAGTTGGTAGAGCATCTGACTGTT                               <  2:253509/132‑1
                                       ATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTATTCCGGCATAGCTCAGTTGGTAGAGCATCTGACTGTT                               <  2:1538154/135‑1
                                       ATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTATTCCGGCATAGCTCAGTTGGTAGAGCATCTGACTGTT                               <  1:2199626/135‑1
                                        TACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTATTCCGGCATAGCTCAGTTGGTAGAGCATCTGACTGTTA                              <  1:2002545/135‑1
                                        TACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTATTCCGGCATAGCTCAGTTGGTAGAGCATCTGACTGTTA                              <  1:2407053/135‑1
                                         ACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTATTCCGGCATAGCTCAGTTGGTAGAGCATCTGACTGTTA                              >  1:2503772/1‑134
                                         ACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTATTCCGGCATAGCTCAGTTGGTAGAGCATCTGACTGTTA                              >  1:1364647/1‑134
                                          CCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTATTCCGGCATAGCTCAGTTGGTAGAGCATCTGACTGTTAAT                            >  2:603485/1‑135
                                          CCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTATTCCGGCATAGCTCAGTTGGTAGAGCATCTGACTGTTAAT                            <  1:624099/135‑1
                                            TGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTATTCCGGCATAGCTCAGTTGGTAGAGCATCTGACTGTTAATCA                          >  1:75739/1‑135
                                            TGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTATTCCGGCATA                                                          >  1:1956033/1‑103
                                              TTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTATTCCGGCATAGCTCAGTTGGTAGAGCATCTGACTGTTAATCAGg                        >  2:1757540/1‑134
                                              TTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTATTCCGGCATAGCTCAGTTGGTAGAGCATCTGACTGTTAATCAGg                        <  1:678855/135‑2
                                                 CCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGTGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTATTCCGGCATAGCTCAGTTGGTAGAGCATCTGACTGTTAATCAGggt                      >  2:2048322/1‑131
                                                 CCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTATTCCGTCATAGCTCAGTTGGTAGAGCATCTGACTGTTAATAAGggt                      >  2:1684830/1‑131
                                                 CCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTATTCCGGCATAGCTCAGTTGGTAGAGCATCTGACTTATAATCAGgat                      >  2:889374/1‑131
                                                 CCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTATTCCGGCATAGCTCAGTTGGTAGAGCATCTGACTGTTAATCAGggt                      <  2:778633/134‑4
                                                 CCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTATTCCGGCATAGCTCAGTTGGTAGAGCATCTGACTGTTAATCAGggt                      >  2:194644/1‑131
                                                 CCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTATTCCGGCATAGCTCAGTTGGTAGAGCATCTGACTGTTAATCAGggt                      >  2:1194467/1‑131
                                                 CCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTATTCCGGCATAGCTCAGTTGGTAGAGCATCTGACTGTTAATCAGggt                      >  2:2202655/1‑131
                                                 CCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTATTCCGGCATAGCTCAGTTGGTAGAGCATCTGACTGTTAATCAGggt                      >  2:575558/1‑131
                                                 CCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTATTCCGGCATAGCTCAGTTGGTAGAGCATCTGACTGTTAATCAGggt                      >  1:2292483/1‑131
                                                 CCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTATTCCGGCATAGCTCAGTTGGTAGAGCATCTGACTGTTAATCAGggt                      >  1:108729/1‑131
                                                 CCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTATTCCGGCATAGCTCAGTTGGTAGAGCATCTGACTGTTAATCAGggt                      >  1:1284517/1‑131
                                                 CCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTATTCCGGCATAGCTCAGTTGGTAGAGCATCTGACTGTTAATCAGggt                      >  1:1508913/1‑131
                                                 CCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTATTCCGGCATAGCTCAGTTGGTAGAGCATCTGACTGTTAATCAGggt                      >  1:1596147/1‑131
                                                 CCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTATTCCGGCATAGCTCAGTTGGTAGAGCATCTGACTGTTAATCAGggt                      >  1:1786300/1‑131
                                                 CCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTATTCCGGCATAGCTCAGTTGGTAGAGCATCTGACTGTTAATCAGggt                      >  1:1827913/1‑131
                                                 CCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTATTCCGGCATAGCTCAGTTGGTAGAGCATCTGACTGTTAATCAGggt                      >  1:2343427/1‑131
                                                 CCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTATTCCGGCATAGCTCAGTTGGTAGAGCATCTGACTGTTAATCAGggt                      >  1:536408/1‑131
                                                 CCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTATTCCGGCATAGCTCAGTTGGTAGAGCATCTGACTGTTAATCAGggt                      >  2:1304771/1‑131
                                                 CCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTATTCCGGCATAGCTCAGTTGGTAGAGCATCTGACTGTTAATCAGggt                      >  2:1066497/1‑131
                                                 CCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTATTCCGGCATAGCTCAGTTGGTAGAGCATCTGACTGTTAATCAGggt                      >  2:1042469/1‑131
                                                 CCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTATTCCGGCATAGCTCAGTTGGTAGAGCATCTGACTGTTAATCAGggt                      >  1:988441/1‑131
                                                 CCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTATTCCGGCATAGCTCAGTTGGTAGAGCATCTG                                     >  1:307873/1‑119
                                                  CATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTATTCCGGCATAGCTCAGTTGGTAGAGCATCTGACTGTTAATCAGggtgt                    <  1:232439/135‑6
                                                      TCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTATTCCGGCATAGCTCAGTTGGTAGAGCATCTGACTGTTAATCAGGGTGTCGAC                >  1:1549996/1‑135
                                                      TCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTATTCCGGCATAGCTCAGTTGGTAGAGCATCTGACTGTTAATCAGGGTGTCGAC                <  2:4201/135‑1
                                                      TCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTATTCCG                                                               >  1:284837/1‑88
                                                      TCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGGTTATTCCGGCATAGCTCAGTTGGTAGAGCATCTGACTGTTAATCAGGGTGTCGAC                >  2:682230/1‑135
                                                        GAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTATTCCGGCATAGCTCAGTTGGTAGAGCATCTGACTGTTAATCAGGGTGTCGACgg              >  2:1441417/1‑133
                                                           CACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTATTCCGGCATAGCTCAGTTGGTAGAGCATCTGACTGTTAATCAGGGTGTCGACGGTTC           >  2:2155042/1‑135
                                                           CACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTATTCCGGCATAGCTCAGTTGGTAGAGCATCTGACTGTTAATCAGGGTGTCGACGGTTC           >  2:2502089/1‑135
                                                                   TCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTATTCCGGCATAGCTCAGTTGGTAGAGCATCTGACTGTTAATCAGGGTGTCGACGGTTCGAGtcc     >  1:146429/1‑130
                                                                   TCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTATTCCGGCATAGCTCAGTTGGTAGAGCATCTGACTGTTAATCAGGGTGTCGACGGTTCGAGtcc     >  1:1149974/1‑130
                                                                   TCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTATTCCGGCATAGC                                                        >  1:2136638/1‑82
                                                                   TCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGATGCCATGCGTTTATTCCGGCATAGCTCAGTTGGTAGAGCATCTGACTGTTAATCAGGGTGTCTACGGTTCGAGtcc     >  2:1851137/1‑130
                                                                     AAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTATTCCGGCATAGCTCAGTTGGTAGAGCATCTGACTGTTAATCAGGGTGTCGACGGTTCGAGtccgcc  <  1:1913521/134‑7
                                                                     AAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTATTCCGGCATAGCTCAGTTGGTAGAGCATCTGACTGTTAATCAGGGTGTCGACGGTTCGAGtccgcc  <  2:2566349/134‑7
                                                                             TAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTATTCCGGCATAGCTCAGTTGGTAGAGCATCTGACTGTTAATCAGGGTGTCGACGGTTCGAGtccgcc  <  2:731380/126‑7
                                                                              AACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTATTCCGGCATAGCTCAGTTGGTAGAGCATCTGACTGTTAATCAGGGTGTCGACGGTTCGAGtccgcc  <  2:140026/125‑7
                                                                                        GTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTATTCCGGCATAGCTCAGTTGGTAGAGCA                                         <  1:1308062/76‑1
                                                                                        GTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCGTTTATTCCGGCATAG                                                         <  1:904664/60‑1
                                                                                                         CCCTGCGAGGGTAGGACGTTGCCATGCGTTTATTCCGGCATAGCTCAGTTGGTAGAGCATCTG                                     >  1:1391632/1‑63
                                                                                                                                ATGCGTTTATTCCGGCATAGCTCAGTTGGTAGAGCATCTGACTGTTA                              <  1:33759/47‑1
                                                                                                                                    |||||||||||||                                                          
TAAGTTAGCACAGAGTGTGGTGACGATAGTGAGAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  Annotation_U21_Trimmed_contig_10/132‑1
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TAGCTCAGTTGGTAGAGCATCTGACTTTTAATCAGAGGGTCGACAGTTCGAGCCTGTC  <  Annotation_U21_Trimmed_contig_12/910‑853

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.