New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? Annotation_U21_Trimmed_contig_11 = 17110 (0.000)356 (0.400)
+CTACTCTCAGAGCACGCGTATC		 67/212 0.0 73.6% intergenic (+53/–) rasttk_feature_creation_tool=RNA_reps_SSU_rRNA/– SSU rRNA ## 16S rRNA, small subunit ribosomal RNA/–
?Annotation_U21_Trimmed_contig_13 191 = 309 (0.980)noncoding (1/75 nt) rasttk_feature_creation_tool=tRNAscan‑SE tRNA‑Ile‑GAT

Only 100 of 463 total aligned reads displayed.

TAAGGTGGGACAGATGATTAGGGTGAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATAAACGGAAACCCACACTATGTCAAAGTTTTGTTTAGTTTTGAGAGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  Annotation_U21_Trimmed_contig_11/1580‑1711
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGGCCTATAGCTCAGCTGGTTTAGAGCGCACGCCTGATAAGCGTGAGGTCGATGGTTCGAGTCCATTTAGGCCCATTTGGA  >  Annotation_U21_Trimmed_contig_13/191‑271
                                                                                                                                    ||||||||||||||||||||||                                                                                 
       GGACAGATGATTAGGGTGAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATAAACGGAAACCCACACTATGTCAAAGTTTTGTTTAGTTTTGAGAGGTCTACTCTCAG                                                                                               >  2:1883145/1‑135
         ACAGATGATTAGGGTGAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATAAACGGAAACCCACACTATGTCAAAGTTTTGTTTAGTTTTGAGAGGTCTACTCTCAGA                                                                                              <  2:2487089/134‑1
           AGATGATTAGGGTGAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATAAACGGAAACCCACACTATGTCAAAGTTTTGTTTAGTTTTGAGAGGTCTACTCTCAGAGCA                                                                                           >  2:2194493/1‑135
               GATTAGGGTGAAGTCGTAACAAGGTAGCCGTCGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATAAACGGAAACCCACACTATGTCAAATTTTTGTTTAGTTTTGAGAGGAATACTCTCAGAGC                                                                                            <  2:1795058/130‑1
               GATTAGGGTGAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATAAACGGAACCCCACACTATGTCAAAGTTTTGTTTAGTTTTGAGAGGTCTACTCTCAGAGCACG                                                                                         <  1:527293/133‑1
               GATTAGGGTGAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATAAACGGAAACCCACACTATGTCAAAGTTTTGTTTAGTTTTGAGAGGTCTACTCTCAGAGCACGCG                                                                                       <  2:592070/135‑1
               GATTAGGGTGAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATAAACGGAAACCCACACTATGTCAAAGTTTTGTTTAGTTTTGAGAGGTCTACTCTCAGAGCACGCG                                                                                       <  1:1634360/135‑1
               GATTAGGGTGAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATAAACGGAAACCCACACTATGTCAAAGTTTTGTTTAGTTTTGAGAGGTCTACTCTCAGAGC                                                                                            <  1:2442381/130‑1
               GATTAGGGTGAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATAAACGGAAACCCACACTATGTCAAAGTTTTGTTTAGTTTTGAGAGGTCTACTCTCAGAGC                                                                                            <  2:265896/130‑1
                ATTAGGGTGAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATAAACGGAAACCCACACTATGTCAAAGTTTTGTTTAGTTTTGAGAGGTCTACTCTCAGAGCACGCGT                                                                                      <  2:680769/135‑1
                ATTAGGGTGAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATAAACGGAAACCCACACTATGTCAAAGTTTTGTTTAGTTTTGAGAGGTCTACTCTCAGAGCACGCGT                                                                                      <  1:1266571/135‑1
                ATTAGGGTGAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATAAACGGAAACCCACACTATGTCAAAGTTTTGTTTAGTTTTGAGAGGTCTACTCTCAGAGCACGCGT                                                                                      <  2:1093672/135‑1
                ATTAGGGTGAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATAAACGGAAACCCAAACTATGTCAAAGTTTTGTTTAGTTTTGAGAGGTCTACTCTCAGAGCACGCGT                                                                                      <  1:103336/135‑1
                  TAGGGTGAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATAAACGGAAACCCACACTATGTCAAAGTTTTGTTTAGTTTTGAGAGGTCTACTCTCAGAGCACGCGTAT                                                                                    <  1:757171/135‑1
                  TAGGGTGAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATAAACGGAAACCCACACTATGTCAAAGTTTTGTTTAGTTTTGAGAGGTCTACTCTCAGAGCACGCGTAT                                                                                    <  1:1683665/135‑1
                  TAGGGTGAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATAAACGGAAACCCACACTATGTCAAAGTTTTGTTTAGTTTTGAGAGGTCTACTCTCAGAGCACGCGTAT                                                                                    <  2:228043/135‑1
                  TAGGGTGAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATAAACGGAAACCCACACTATGTCAAAGTTTTGTTTAGTTTTGAGAGGTCTACTCTCAGAGCACGCGTAT                                                                                    <  1:2278290/135‑1
                     GGTGAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATAAACGGAAACCCACACTATGTCAAAGTTTTGTTTAGTTTTGAGAGGTCTACTCTCAGAGCACGCGTATCG                                                                                  >  1:711627/1‑134
                     GGTGAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATAAACGGAAACCCACACTATGTCAAAGTTTTGTTTAGTTTTGAGAGGTCTACTCTCAGAGCACGCGTATCG                                                                                  >  2:2413802/1‑134
                     GGTGAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATAAACGGAAACCCACACTATGTCAAAGTTTTGTTTAGTTTTGAGAGGTCTACTCTCAGAGCACGCGTATCG                                                                                  >  2:625587/1‑134
                     GGTGAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATAAACGGAAACCCACACTATGTCAAAGTTGTGTTTAGTTTTGAGAGGTCTACTCTCAGAGCACGCGTATCG                                                                                  >  2:2096308/1‑134
                       TGAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATAAACGGAAACCCACACTATGTCAAAGTTTTGTTTAGTTTTGAGAGGTCTACTCTCAGAGCACGCGTATCGG                                                                                 <  1:2500829/133‑1
                        GAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATAAACGGAAACCCACACTATGTCAAAGTTTTGTTTAGTTTTGAGAGGTCTACTCTCAGAGCACGCGTATCGGGC                                                                               <  2:2145899/134‑1
                          AGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATAAACGGAAACCCACACTATGTCAAAGTTTTGTTTAGTTTTGAGAGGTCTACTCTCAGAGCACGCGTATCGGGCCTA                                                                            >  2:79267/1‑135
                          AGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATAAACGGAAACCCACACTATGTCAAAGTTTTGTTTAGTTTTGAGAGGTCTACTCTCAGAGCACGCGTATCGGGCCTA                                                                            >  1:1393222/1‑135
                            TCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATAAACGGAAACCCACACTATGTCAAAGTTTTGTTTAGTTTTGAGAGGTCTACTCTCAGAGCACGCGTATCGGGCCTAT                                                                           >  2:484983/1‑134
                            TCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATAAACGGAAACCCACACTATGTCAAAGTTTTGTTTAGTTTTGAGAGGTCTACTCTCAGAGCACGCGTATCGGGCCTAT                                                                           >  1:1803545/1‑134
                            TCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATAAACGGAAACCCACACTATGTCAAAGTTTTGTGTAGTTTTGAGAGGTCTACTCTCAGAGCACGCGTATCGGGCCGAT                                                                           >  2:1148788/1‑134
                             CGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTCAGGAATAAACGGAAACCCACACTCTGTCAAAGTTGTGTTTAGTTTTGAGAGGTCTACTCTCAGAGCACGCGTATCGGGCCTAT                                                                           >  2:173016/1‑133
                               TAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATAAACGGAAACCCACACTATGTCAAAGTTTTGTTTAGTTTTGAGAGGTCTACTCTCAGAGCACGCGTATCGGGCCTATAGCT                                                                       <  1:864015/135‑1
                               TAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATAAACGGAAACCCACACTATGTCAAAGTTTTGTTTAGTTTTGAGAGGTCTACTCTCAGAGCACGCGTATCGGGCCTATAGCT                                                                       <  2:1610212/135‑1
                               TAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATAAACGGAAACCCACACTATGTCAAAGTTTTGTTTAGTTTTGAGAGGTCTACTCTCAGAGCACGCGTATCGGGCCTATAGCT                                                                       <  2:2475211/135‑1
                               TAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATAAACGGAAACCCACACTATGTCAAAGTTTTGTTTAGTTTTGAGAGGTCTACTCTCAGAGCACGCGTATCGGGCCTATAGCT                                                                       <  1:886809/135‑1
                               TAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATAAACGGAAACCCACACTATGTCAAAGTTTTGTTTAGTTTTGAGAGGTCTACTCTCAGAGCACGCGTATCGGGCCTATAGCT                                                                       <  1:1716008/135‑1
                                  CAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCGCCTCCTTTCTAAGGAATAAACGGAAACCCACACTATGTCAAAGTTTTGTTTAGTTTTGAGAGGTCTACTCTCAGAGCACGCGTATCGGGCCTATAGCTC                                                                      >  2:2392663/1‑133
                                  CAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATAAACGGAAACCCACACTATGTCAAAGTTTTGTTTAGTTTTGAGAGGTCTACTCTCAGAGCACGCGTATCGGGCCTATAGCTC                                                                      >  2:1165362/1‑133
                                  CAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATAAACGGAAACCCACACTATGTCAAAGTTTTGTTTAGTTTTGAGAGGTCTACTCTCAGAGCACGCGTATCGGGCCTATAGCTC                                                                      >  1:1464626/1‑133
                                       TAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGTAATAAACGGAAACCCACACTATGTCAAAGTTTTGTTTAGTTTTGAGAGGTCTACTCTCAGAGCACGCGTATCGGGCATATAGCTCAGCTGGT                                                               <  2:2320773/135‑1
                                        AGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATAAACGGAAACCCACACTATGTCAAAGTTTTGTTTAGTTTTGAGAGGTCTACTCTCAGAGCACGCGTATCGGGCCTATAGCTCAGCTGGT                                                               <  1:1755098/134‑1
                                        AGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATAAACGGAAACCCACACTATGTCAAAGTTTTGTTTAGTTTTGAGAGGTCTACTCTCAGAGCACGCGTATCGGGCCTATAGCTCAGCTGGT                                                               <  1:1104353/134‑1
                                        AGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATAAACGGAAACCCACACTATGTCAAAGTTTTGTTTAGTTTTGAGAGGTCTACTCTCAGAGCACGCGTATCGGGCCTATAGCTCAGCTGGT                                                               <  1:447660/134‑1
                                        AGCCGGAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATAAACGGAAACCCACACTATGTCAAAGTTTTGTTTAGTTTTGAGAGGTCTACTCTCAGAGCACGCGTATCGGGCCTATAGCTCAGCTGGT                                                               <  2:2363217/134‑1
                                            GTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATAAACGGAAACCCACACTATGTCAAAGTTTTGTTTAGTTTTGAGAGGTCTACTCTCAGAGCACGCGTATCGGGCCTATAGCTCAGCTGGTTTAGA                                                          <  2:882348/135‑1
                                            GTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATAAACGGAAACCCACACTATGTCAAAGTTTTGTTTAGTTTTGAGAGGTCTACTCTCAGAGCACGCGTATCGGGCCTATAGCTCAGCTGGTTTAGA                                                          <  2:910818/135‑1
                                             TAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATAAACGGAAACCCACACTATGTCAAAGTGTTGTTTAGTTTTGAGAGGTCTACTCTCAGAGCACGCGTATCGGGCCTATAGCTCAGCTGGTTTAGAG                                                         >  1:1318880/1‑135
                                               GGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATAAACGGAAACCCACACTATGTCAAAGTTTTGTTTAGTTTTGAGAGGTCTACTCTCAGAGCACGCGTATCGGGCCTATAGCTCAGCTGGTTTAGAGC                                                        <  1:281233/134‑1
                                               GGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATAAACGGAAACCCACACTATGTCAAAGTTTTGTTTAGTTTTGAGAGGTCTACTCTCAGAGCACGCGTATCGGGCCTATAGCTCAGCTGGTTTAGAGC                                                        <  1:1081684/134‑1
                                               GGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATAAACGGAAACCCACACTATGTCAAAGTTTTGTTTAGTTTTGAGAGGTCTACTCTCAGAGCACGCGTATCGGGCCTATAGCTCAGCTGGTTTAGAGC                                                        <  1:1380290/134‑1
                                                   AACCTGCGGCTGGATCACCTCCTTTCTAAGGAATAAACGGAAACCCACACTATGTCAAAGTTTTGTTTAGTTTTGAGAGGTCTACTCTCAGAGCACGCGTATCGGGCCTATAGCTCAGCTGGTTTAGAGCGCAC                                                    >  2:1300498/1‑134
                                                      CTGCGGCTGGATCACCTCCTTTCTAAGGAATAAACGGAAACCCACACTATGTCAAAGTTTTGTTTAGTTTTGAGAGGTCTACTCTCAGAGCACGCGTATCGGGCCTATAGCTCAGCTGGTTTAGAGCGCACGCCT                                                <  2:448732/135‑1
                                                      CTGCGGCTGGATCACCTCCTTTCTAAGGAATAAACGGAAACCCACACTATGTCAAAGTTTTGTTTAGTTTTGAGAGGTCTACTCTCAGAGCACGCGTATCGGGCCTATAGCTCAGCTGGTTTAGAGCGCACGCCT                                                >  2:802290/1‑135
                                                      CTGCGGCTGGATCACCTCCTTTCTAAGGAATAAACGGAAACCCACACTATGTCAAAGTTTTGTTTAGTTTTGAGAGGTCTACTCTCAGAGCACGCGTATCGGGCCTATAGCTCAGCTGGTTTAGAGCGCACGCCT                                                <  1:1958844/135‑1
                                                      CTGCGGCTGGATCACCTCCTTTCTAAGGAATAAACGGAAACCCACACTATGTCAAAGTTTTGTTTAGTTTTGAGAGGTCTACTCTCAGAGCACGCGTATCGGGCCTATAGCTCAGCTGGTTTAGAGCGCACGCCT                                                <  1:802290/135‑1
                                                      CTGCGGCTGGATCACCTCCTTTCTAAGGAATAAACGGAAACCCACACTATGTCAAAGTTTTGTTTAGTTTTGAGAGGTCTACTCTCAGAGCACGCGTATCGGGCCTATAGCTCAGCTGGTTTAGAGCGCACGCCT                                                <  1:2088907/135‑1
                                                      CTGCGGCTGGATCACCTCCTTTCTAAGGAATAAACGGAAACCCACACTATGTCAAAGTTTTGTTTAGTTTTGAGAGGTCTACTCTCAGAGCACGCGTATCGGGCCTATAGCTCAGCTGGTTTAGAGCGCACGCCT                                                <  2:1638255/135‑1
                                                      CTGCGGCTGGATCACCTCCTTTCTAAGGAATAAACGGAAACCCACACTATGTCAAAGTTTTGTTTAGTTTTGAGAGGTCTACTCTCAGAGCACGCGTATCGGGCCTATAGCTCAGCTGGTTTAGAGCGCACGCCT                                                <  1:613871/135‑1
                                                       TGCGGCTGGATCACCTCCTTTCTAAGGAATAAACGGAAACCCACACTATGTCAAAGTTTTGTTTAGTTTTGAGAGGTCTACTCTCAGAGCACGCGTATCGGGCCTATAGCTCAGCTGGTTTAGAGCGCACGCCTG                                               >  2:1985317/1‑135
                                                       TGCGGCTGGATCACCTCCTTTCTAAGGAATAAACGGAAACCCACACTATGTCAAAGTTTTGTTTAGTTTTGAGAGGTCTACTCTCAGAGCACGCGTATCGGGCCTATAGCTCAGCTGGTTTAGAGCGCACGCCTG                                               >  1:2013894/1‑135
                                                        GCGGCTGGATCACCTCCTTTCTAAGGAATAAACGGAAACCCACACTATGTCAAAGTTTTGTTTAGTTTTGAGAGGTCTACTCTCAGAGCACGCGTATCGGGCCTATAGCTCAGCTGGTTTAGAGCGCACGCCTGA                                              >  1:1867984/1‑135
                                                            CTGGATCACCTCCTTTCTAAGGAATAAACGGAAACCCACACTATGTCAAAGTTTTGTTTAGTTTTGAGAGGTCTACTCTCAGAGCACGCGTATCGGGCCTATAGCTCAGCTGGTTTAGAGCGCACGCCTGATAAG                                          >  2:1942461/1‑135
                                                            CTGGATCACCTCCTTTCTAAGGAATAAACGGAAACCCACACTATGTCAAAGTGTGGTTTAGTTTTGAGAGGTCTACTCTCAGAGCACGCGTATCGGGCCTATAGCTCAGCGGGTTTAGAGCGCACGCCTGATAAG                                          >  2:280575/1‑135
                                                             TGGATCACCTCCTTTCTAAGGAATAAACGGAAACCCACACTATGTCAAAGTTTTGTTTAGTTTTGAGAGGTCTACTCTCAGAGCACGCGTATCGGGCCTATAGCTCAGCTGGTTTAGAGCGCACGCCTGATAAG                                          <  1:1244044/134‑1
                                                              GGATCACCTCCTTTCTAAGGAATAAACGGAAACCCACACTATGTCAAAGTTTTGTTTAGTTTTGAGAGGTCTACTCTCAGAGCACGCGTATCGGGCCTATAGCTCAGCTGGTTTAGAGCGCACGCCTGATAAGC                                         <  2:1362023/134‑1
                                                              GGATCACCTCCTTTCTAAGGAATAAACGGAAACCCACACTATGTCAAAGTTTTGTTTAGTTTTGAGAGGTCTACTCTCAGAGCACGCGTATCGGGCCTATAGCTCAGCTGGTTTAGAGCGCACGCCTGATAAGC                                         <  2:754905/134‑1
                                                               GATCACCTCCTTTCTAAGGAATAAACGGAAACCCACACTATGTCAAAGTTTTGTTTAGTTTTGAGAGGTCTACTCTCAGAGCACGCGTATCGGGCCTATAGCTCAGCTGGTTTAGAGCGCACGCCTGATAAGCGT                                       <  1:94931/135‑1
                                                                 TCACCTCCTTTCTAAGGAATAAACGGAAACCCACACTATGTCAAAGTTTTGTTTAGTTTTGAGAGGTCTACTCTCAGAGCACGCGTATCGGGCCTATAGCTCAGCTGGTTTAGAGCGCACGCCTGATAAGCGTGA                                     >  1:2190143/1‑135
                                                                  CACCTCCTTTCTAAGGAATAAACGGAAACCCACACTATGTCAAAGTTTTGTTTAGTTTTGAGAGGTCTACTCTCAGAGCACGCGTATCGGGCCTATAGCTCAGCTGGTTTAGAGCGCACGCCTGATAAGCGTGAG                                    >  1:2367956/1‑135
                                                                  CACCTCCTTTCTAAGGAATAAACGGAAACCCACACTATGTCAAAGTTTTGTTTAGTTTTGAGAGGTCTACTCTCAGAGCACGCGTATCGGGCCTATAGCTCAGCTGG‑TTAGAGCGCACGCCTGATAAGCGTGAGG                                   <  1:1210770/135‑1
                                                                    CCTCCTTTCTAAGGAATAAACGGAAACCCACACTATGTCAAAGTTTTGTTTAGTTTTGAGAGGTCTACTCTCAGAGCACGCGTATCGGGCCTATAGCTCAGCTGGTTTAGAGCGCACGCCTGATAAGCGTGAGGT                                  <  1:1568942/135‑1
                                                                            CTAAGGAATAAACGGAAACCCACACTATGTCAAAGTTTTGTTTAGTTTTGAGAGGTCTACTCTCAGAGCACGCGTATCGGGCCTATAGCTCAGCTGGTTTAGAGCGCACGCCTGATAAGCGTGAGGTCGATGGTT                          <  2:1413694/135‑1
                                                                             TAAGGAATAAACGGAAACCCACACTATGTCACAGTTTGGTGTAGGTTTGGGAGGTCTACTCTCAGAGCACGCGTCTCGGGCCTATAGCTCAGCGGGTTTAGAGCGCACGCCGGGTAAGCGTGAGGTCGAGGGTTC                         >  2:833814/1‑135
                                                                              AAGGAATAAACGGAACCCCACACTATGTCACAGTTTTGTTTAGTTTTGAGAGGTCTACGCTCAGAGCACGCGTATCGGGCCTATAGCTCAGCTGGTTTAGAGCGCACGCCTGATAAGCGTGAGGTCGATGGTTCG                        <  2:417318/135‑1
                                                                              AAGGAATAAACGGAAACCCACACTATGTCAAAGTTTTGTTTAGTTTTGAGAGGTCTACTCTCAGAGCACGCGTATCGGGCCTATAGCTCAGCTGGTTTAGAGCGCACGCCTGATAAGCGTGAGGTCGATGGTTCG                        <  2:968509/135‑1
                                                                              AAGGAATAAACGGAAACCCACACTATGTCAAAGTTTTGTTTAGTTTTGAGAGGTCTACTCTCAGAGCACGCGTATCGGGCCTATAGCTCAGCTGGTTTAGAGCGCACGCCTGATAAGCGTGAGGTCGATGGTTCG                        <  2:155719/135‑1
                                                                              AAGGAATAAACGGAAACCCACACTATGTCAAAGTTTTGTTTAGTTTTGAGAGGTCTACTCTCAGAGCACGCGTATCGGGCCTATAGCTCAGCTGGTTTAGAGCGCACGCCTGATAAGCGTGAGGTCGATGGTTCG                        <  1:1586588/135‑1
                                                                              AAGGAATAAACGGAAACCCACACTATGTCAAAGTTTTGTTTAGTTTTGAGAGGTCTACTCTCAGAGCACGCGTATCGGGCCTATAGCTCAGCTGGTTTAGAGCGCACGCCTGATAAGCGTGAGGTCGATGGTTCG                        <  1:1673506/135‑1
                                                                              AAGGAATAAACGGAAACCCACACTATGTCAAAGTTTTGTTTAGTTTTGAGAGGTCTACTCTCAGAGCACGCGTATCGGGCCTATAGCTCAGCTGGTTTAGAGCGCACGCCTGATAAGCGTGAGGTCGATGGTTCG                        <  1:461631/135‑1
                                                                              AAGGAATAAACGGAAACCCACACTATGTCAAAGTTTTGTTTAGTTTTGAGAGGTCTACTCTCAGAGCACGCGTATCGGGCCTATAGCTCAGCTGGTTTAGAGCGCACGCCTGATAAGCGTGAGGTCGATGGTTCG                        <  2:1002196/135‑1
                                                                              AAGGAATAAACGGAAACCCACACTATGTCAAAGTTTTGTTTAGTTTTGAGAGGTCTACTCTCAGAGCACGCGTATCGGGCCTATAGCTCAGCTGGTTTAGAGCGCACGCCTGATAAGCGTGAGGTCGATGGTTCG                        <  2:1393222/135‑1
                                                                              AAGGAATAAACGGAAACCCACACTATGTCAAAGTTTTGTTTAGTTTTGAGAGGTCTACTCTCAGAGCACGCGTATCGGGCCTATAGCTCAGCGGGTTTAGAGCGCACGCCTGATAAGCGTGAGGTCGATGGTTCG                        <  2:1315801/135‑1
                                                                                  AATAAACGGAAACCCACACTATGTCAAAGTTTTGTTTAGTTTTGAGAGGTCTACTCTCAGAGCACGCGTATCGGGCCTATAGCTCAGCTGGTTTAGAGCGCACGCCTGATAAGCGTGAGGTCGATGGTTCGAGTC                    >  2:343360/1‑135
                                                                                  AATAAACGGAAACCCACACTATGTCAAAGTTTTGTTTAGTTTTGAGAGGTCTACTCTCAGAGCACGCGTATCGGGCCTATAGCTCAGCTGGTTTAGAGCGCACGCCTGATAAGCGTGAGGTCGATGGTTC                         >  1:410273/1‑130
                                                                                    TAAACGGAAACCCACACTATGTCAAAGTTTTGTTTAGTTTTGAGAGGTCTACTCTCAGAGCACGCGTATCGGGCCTATAGCTCAGCTGGTTTAGAGCGCACGCCTGATAAGCGTGAGGTCGATGGTTCGAGTCC                   <  2:251896/134‑1
                                                                                    TAAACGGAAACCCACACTATGTCAAAGTTTTGTTTAGTTTTGAGAGGTCTACTCTCAGAGCACGCGTATCGGGCCTATAGCTCAGCTGGTTTAGAGCGCACGCCTGATAAGCGTGAGGTCGATGGTTCGAGTCC                   <  1:1913192/134‑1
                                                                                    TAAACGGAAACCCACACTATGTCAAAGTTTTGTTTAGTTTTGAGAGGTCTACTCTCAGAGCACGCGTATCGGGCCTATAGCTCAGCTGGTTTAGAGCGCACGCCTGATAAGCGTGAGGTCGATGGTTCGAGTCC                   <  1:2121312/134‑1
                                                                                     AAACGGAAACCCACACTATGTCAAAGTTTTGTTTAGTTTTGAGAGGTCTACTCTCAGAGCACGCGTATCGGGCCTATAGCTCAGCTGGTTTAGAGCGCACGCCTGATAAGCGTGAGGTCGATGGTTCGAGTCCAT                 >  1:2537953/1‑135
                                                                                       ACGGAAACCCACACTATGTCAAAGTTTTGTTTAGTTTTGAGAGGTCTACTCTCAGAGCACGCGTATCGGGCCTATAGCTCAGCTGGTTTAGAGCGCACGCCTGATAAGCGTGAGGTCGATGGTTCGAGTCCATTT               >  2:1660469/1‑135
                                                                                          GAAACCCACACTATGTCAAAGTTTTGTTTAGTTTTGAGAGGTCTACTCTCAGAGCACGCGTATCGGGCCTATAGCTCAGCTGGTTTAGAGCGCACGCCTGATAAGCGTGAGGTCGATGGTTCGAGTCCATTTAG             >  2:1473271/1‑134
                                                                                              CCCACACTATGTCAAAGTTTTGTTTAGTTTTGAGAGGTCTACTCTCAGAGCACGCGTATCGGGCCTATAGCTCAGCTGGTTTAGAGCGCACGCCTGATAAGCGTGAGGTCGATGGTTCGAGTCCATTTAGGCCCA        >  2:2434030/1‑135
                                                                                               CCACACTATGTCAAAGTTTTGTTTAGTTTTGAGAGGTCTACTCTCAGAGCACGCGTATCGGGCCTATAGCTCAGCTGGTTTAGAGCGCACGCCTGATAAGCGTGAGGTCGATGGTTCGAGTCCATTTAGGCCCA        >  2:711127/1‑134
                                                                                               CCACACTATGTCAAAGTTTTGTTTAGTTTTGAGAGGTCTACTCTCAGAGCACGCGTATCGGGCCTATAGCTCAGCTGGTTTAGAGCGCACGCCTGATAAGCGTGAGGTCGATGGTTCGAGTCCATTTAGGCCCA        >  1:1499342/1‑134
                                                                                                 ACACTATGTCAAAGTTTTGTTTAGTTTTGAGAGGTCTACTCTCAGAGCACGCGTATCGGGCCTATAGCTCAGCTGGTTTAGAGCGCACGCCTGATAAGCGTGAGGTCGATGGTTCGAGTCCATTTAGGCCCATac     <  1:206361/135‑3
                                                                                                 ACACTATGTCAAAGTTTTGTTTAGTTTTGAGAGGTCTACTCTCAGAGCACGCGTATCGGGCCTATAGCTCAGCTGGTTTAGAGCGCACGCCTGATAAGCGTGAGGTCGATGGTTCGAGTCCATTTAGGCCCATac     <  1:673747/135‑3
                                                                                                  CACTATGTCAAAGTTTTGTTTAGTTTTGAGAGGTCTACTCTCAGAGCACGCGTATCGGGCCTATAGCTCAGCTGGTTTAGAGCGCACGCCTGATAAGCGTGAGGTCGATGGTTCGAGTCCATTTAGGCCCATaca    <  1:2405625/135‑4
                                                                                                    CTATGTCAAAGTTTTGTTTAGTTTTGAGAGGTCTACTCTCAGAGCACGCGTATCGGGCCTATAGCTCAGCTGGTTTAGAGCGCACGCCTGATAAGCGTGAGGTCGATGGTTCGAGTCCATTTAGGCCCATacatg  <  1:831638/135‑6
                                                                                                                    TTTAGTTTTGAGAGGTCTACTCTCAGAGCACGCGTATCGGGCCTATAGCTCAGCTGGTTTAGAGCGCACGCCTGATAAGCGTGAGGTCGATGGTTCG                        <  1:339519/97‑1
                                                                                                                                               GCACGCGTATCGGGCCTATAGCTCAGCTGGTTTAGAGCGCACGCCTGATAAGCGTGAGGTCGATG                             >  1:2235860/1‑65
                                                                                                                                               GCACGCGTATCGGGCCTATAGCTCAGCTGGTTTAGAGCGC                                                      >  1:566371/1‑40
                                                                                                                                                     GTATCGGGCCTATAGCTCAGCTGGTTTAGAGCGCACGCCTGATAAGCGTGAGGTCGATGGTTCG                        <  2:1041570/64‑1
                                                                                                                                                     GTATCGGGCCTATAGCTCAGCTGGTTTAGAGCGCACGCCTGATAAGCGTGAGGTCGATGGTTCG                        >  1:1041570/1‑64
                                                                                                                                    ||||||||||||||||||||||                                                                                 
TAAGGTGGGACAGATGATTAGGGTGAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATAAACGGAAACCCACACTATGTCAAAGTTTTGTTTAGTTTTGAGAGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  Annotation_U21_Trimmed_contig_11/1580‑1711
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGGCCTATAGCTCAGCTGGTTTAGAGCGCACGCCTGATAAGCGTGAGGTCGATGGTTCGAGTCCATTTAGGCCCATTTGGA  >  Annotation_U21_Trimmed_contig_13/191‑271

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.