New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? Annotation_U21_Trimmed_contig_10 1 =0 (0.000)399 (0.310) 91/256 0.2 100% noncoding (117/117 nt) rasttk_feature_creation_tool=RNA_reps_5S_rRNA 5S rRNA # 5S ribosomal RNA ‑ 3 prime truncation
?Annotation_U21_Trimmed_contig_12 = 1004 0 (0.000)intergenic (‑5/–) rasttk_feature_creation_tool=tRNAscan‑SE/– tRNA‑Val‑TAC/–

Only 100 of 399 total aligned reads displayed.

CGTAAGTTAGCACAGAGTGTGGTGACGATAGTGAGAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  Annotation_U21_Trimmed_contig_10/134‑1
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGGTTCGAGCCCTGTATCCCCCATTATATTTTGAGCCGTTAGCTCAGTTGGTAGAGCATCTGACTTTTAATCAGAGGGT  <  Annotation_U21_Trimmed_contig_12/1004‑871
                                                                                                                                                                                                                                                                            
CGTAAGTTAGCACAGAGTGTGGTGACGATAGTGAGAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCT                                                                                                                                       <  1:1779258/135‑1
 GTAAGTTAGCACAGAGTGTGGTGACGATTGTGAGAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCTAGAGTAGTTGGGGGATCTCCCCCTGCGAGGGTAGGACGTTGCCATGCTA                                                                                                                                      <  1:2535018/135‑1
    AGTTAGCACAGAGTGTGGTGACGATAGTGAGAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAA                                                                                                                                    <  1:2039372/134‑1
             AGAGTGTGGTGACGATAGTGAGAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATT                                                                                                                           >  2:183691/1‑134
             AGAGTGTGGTGACGATAGTGAGAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATT                                                                                                                           >  2:1905370/1‑134
                 TGTGGTGACGATAGTGAGAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTA                                                                                                                          <  1:770720/131‑1
                  GTGGTGACGATAGTGAGAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCA                                                                                                                     >  2:2119371/1‑135
                  GTGGTGACGATAGTGAGAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCA                                                                                                                     >  1:2110561/1‑135
                  GTGGTGACGATAGTGAGAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCA                                                                                                                     >  2:2631481/1‑135
                  GTGGTGACGATAGTGAGAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCA                                                                                                                     >  2:1476297/1‑135
                  GTGGTGACGATAGTGAGAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCA                                                                                                                     >  1:525419/1‑135
                  GTGGTGACGATAGTGAGAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCA                                                                                                                     >  2:673238/1‑135
                   TGGTGACGATAGTGAGAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTC                                                                                                                      <  1:1470558/133‑1
                   TGGTGACGATAGTGAGAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTC                                                                                                                      <  1:682535/133‑1
                   TGGTGACGATAGTGAGAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTC                                                                                                                      <  1:111451/133‑1
                       GACGATAGTGAGAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGG                                                                                                                >  1:61614/1‑135
                       GACGATAGTGAGAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGG                                                                                                                >  1:441517/1‑135
                       GACGATAGTGAGAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGG                                                                                                                >  1:2918671/1‑135
                       GACGATAGTGAGAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTG                                                                                                                 <  1:1943658/134‑1
                           ATAGTGAGAAGGATAGACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGA                                                                                                            <  1:928285/135‑1
                            TAGTGAGAAGGATATACCTGTTCCCATGTCGAACACATAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGTAGAG                                                                                                           >  2:712961/1‑135
                            TAGTGAGAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAG                                                                                                           >  1:2015056/1‑135
                            TAGTGAGAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAG                                                                                                           >  2:1524814/1‑135
                            TAGTGAGAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAG                                                                                                           >  2:621359/1‑135
                              GTGAGAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGC                                                                                                          >  1:216970/1‑134
                              GTGAGAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTGGGGAGAGC                                                                                                          >  2:866313/1‑134
                              GTGAGAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATAGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGATGGGAGAGC                                                                                                          >  2:1275868/1‑134
                                GAGAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGC                                                                                                          >  1:885395/1‑132
                                  GAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCT                                                                                                      >  2:514017/1‑134
                                  GAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCT                                                                                                      >  2:1022297/1‑134
                                  GAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTC                                                                                                                      >  2:1776850/1‑118
                                           ACCTGTTCCCCTGTCGAACACAGTAGTCAAGCTTCTTAACGCCGAGTGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGTCGTTGCCCTGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAG                                                                                            <  1:307941/135‑1
                                           ACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGTGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAG                                                                                            <  1:227079/135‑1
                                           ACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGTGAGAGCATCTGCCTTACAAG                                                                                            >  2:2976503/1‑135
                                           ACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAG                                                                                            <  1:1005682/135‑1
                                           ACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAG                                                                                            >  2:2463374/1‑135
                                           ACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAG                                                                                            <  2:330134/135‑1
                                                  CCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGcct                                                                                     <  1:1251039/135‑4
                                                   CCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGCGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGT                                                                                    >  2:1734025/1‑135
                                                   CCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGT                                                                                    >  1:2996383/1‑135
                                                   CCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGT                                                                                    >  1:2503629/1‑135
                                                   CCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGT                                                                                    >  1:511748/1‑135
                                                   CCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGT                                                                                    >  1:2852202/1‑135
                                                   CCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGT                                                                                    <  2:354770/135‑1
                                                   CCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGT                                                                                    >  1:1602770/1‑135
                                                   CCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATT                                                                                                                           <  2:167130/96‑1
                                                   CCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATT                                                                                                                           >  1:167130/1‑96
                                                    CATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTC                                                                                   <  1:1208370/135‑1
                                                     ATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCA                                                                                  >  2:2037062/1‑135
                                                     ATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGG                                                                                     >  2:2528580/1‑132
                                                          GAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGGT                                                                             <  1:2393702/135‑1
                                                          GAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGG                                                                              <  2:110971/134‑1
                                                          GAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGG                                                                              <  1:1039713/134‑1
                                                             CACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGGTTCG                                                                          >  2:750808/1‑135
                                                             CACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGGTTCG                                                                          >  1:725576/1‑135
                                                              ACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGGTTCGA                                                                         <  1:850563/135‑1
                                                              ACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGGTTCGA                                                                         <  2:2681321/135‑1
                                                                     TCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGGTTCGAGCCCTGT                                                                  >  1:653185/1‑135
                                                                       AAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGGTTCGAGCCCTGTAT                                                                <  1:2320872/135‑1
                                                                       AAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGGTTCGAGCCCTGT                                                                  <  2:2157210/133‑1
                                                                        AGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGGTTCGAGCCCTGTAT                                                                >  2:406462/1‑134
                                                                            TCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGGTTCGAGCCCTGTATCCCCC                                                           <  2:84104/135‑1
                                                                                 ACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTA                                                                                                                          >  2:2332742/1‑67
                                                                                    CCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGGTTCGAGCCCTGTATCCCCCATTATATT                                                   <  2:1956980/135‑1
                                                                                      GAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGGTTCGAGCCCTGTATCCCCCATTATATTT                                                  <  2:96494/134‑1
                                                                                      GAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGGTTCGAGCCCTGTATCCCCCATTATATTT                                                  <  1:970794/134‑1
                                                                                      GAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGGTTCGAGCCCTGTATCCCCCATTATATTT                                                  <  1:1716941/134‑1
                                                                                      GAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGGTTCGAGCCCTGTATCCCCCATTATATTT                                                  <  2:271263/134‑1
                                                                                          GTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGGTTCGAGCCCTGTATCCCCCATTATATTTTGAGC                                             >  1:1380013/1‑135
                                                                                           TAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGGTTCGAGCCCTGTATCCCCCATTATATTTTGAGC                                             <  2:452430/134‑1
                                                                                                GGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGGTTCGAGCCCTGTATCCCCCATTATATTTTGAGCCGTT                                         <  2:2477351/133‑1
                                                                                                GGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGGTTCGAGCCCTGTATCCCCCATTATATTTTGAGCCGTT                                         <  1:801362/133‑1
                                                                                                 GGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGGTTCGAGCCCTGTATCCCCCATTATATTTTGAGCCGTTAGC                                      <  1:5786/135‑1
                                                                                                 GGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGGTTCGAGCCCTGTATCCCCCATTATATTTTGAGCCGTTAG                                       >  2:2286324/1‑134
                                                                                                      TCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGGTTCGAGCCCTGTATCCCCCATTATATTTTGAGCCGTTAGCTCAGT                                 >  1:2467133/1‑135
                                                                                                      TCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGGTTCGAGCCCTGTATCCCCCATTATATTTTGAGCCGTTAGCTCAGT                                 >  1:2490288/1‑135
                                                                                                      TCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGGTTCGAGCCCTGTATCCCCCATTATATTTTGAGCCGTTAGCTCAGT                                 >  1:2128225/1‑135
                                                                                                      TCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGGTTCGAGCCCTGTATCCCCCATTATATTTTGAGCCGTTAGCTCAGT                                 >  1:1289268/1‑135
                                                                                                        GCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGGTTCGAGCCCTGTATCCCCCATTATATTTTGAGCCGTTAGCTCAGTTG                               >  2:1354128/1‑135
                                                                                                        GCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGGTTCGAGCCCTGTATCCCCCATTATATTTTGAGCCGTTAGCTCAGTTG                               >  2:529765/1‑135
                                                                                                          CCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGGTTCGAGCCCTGTATCCCCCATTATATTTTGAGCCGTTAGCTCAGTTGGT                             >  1:341236/1‑135
                                                                                                                CGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGGTTCGAGCCCTGTATCCCCCATTATATTTTGAGCCGTTAGCTCAGTTGGTAGAGCA                       <  1:2941870/135‑1
                                                                                                                CGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGGTTCGAGCCCTGTATCCCCCATTATATTTTGAGCCGTTAGCTCAGTTGGTAGAGCA                       <  2:1297037/135‑1
                                                                                                                       AGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGGTTCGAGCCCTGTATCCCCCATTATATTTTGAGCCGTTAGCTCAGTTGGTAGAGCATCTGACT                >  2:1151681/1‑135
                                                                                                                       AGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGGTTCGAGCCCTGTATCCCCCATTATATTTTGAGCCGTTAGCTCAGTTGGTAGAGCATCTGACT                >  2:1239792/1‑135
                                                                                                                       AGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGGTTCGAGCCCTGTATCCCCCATTATATTTTGAGC                                             >  2:2859214/1‑106
                                                                                                                           CGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGGTTCGAGCCCTGTATCCCCCATTATATTTTGAGCCGTTAGCTCAGTTGGTAGAGCA                       >  2:2104390/1‑124
                                                                                                                             TTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACATGTTCGAGCCCTGTATCCCCCATTATATTTTGAGCCGTTAGCTCAGTTGGTAGAGCATCTGACTTTTAAT          <  1:2229011/135‑1
                                                                                                                             TTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGGTTCGAGCCCTGTATCCCCCATTATATTTTGAGCCGTTAGCTCAGTTGGTAGAGCATCTGACTTTTAAT          <  2:2394322/135‑1
                                                                                                                               GCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGGTTCGAGCCCTGTATCCCCCATTATATTTTGAGCCGTTAGCTCAGTTGGTAGAGCATCTGACTTTTAATC         <  1:2631480/134‑1
                                                                                                                                 CATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGGTTCGAGCCCTGTATCCCCCATTATATTTTGAGCCGTTAGCTCAGTTGGTAGAGCATCTGACTTTTAATCAGA      >  1:2792939/1‑135
                                                                                                                                 CATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGGTTCGAGCCCTGTATCCCCCATTATATTTTGAGCCGTTAGCTCAGTTGGTAGAGCATCTGACTTTTAAT          >  2:105147/1‑131
                                                                                                                                  ATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGGTTCGAGCCCTGTATCCCCCATTATATTTTGAGCCGTTAGCTCAGTTGGTAGAGCATCTGACTTTTAATCAGAG     >  1:1872774/1‑135
                                                                                                                                  ATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGGTTCGAGCCCTGTATCCCCCATTATATTTTGAGCCGTTAGCTCAGTTGGTAGAGCATCTGACTTTTAATCAGAG     >  2:2823507/1‑135
                                                                                                                                  ATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGGTTCGAGCCCTGTATCCCCCATTATATTTTGAGCCGTTAGCTCAGTTGGTAGAGCATCTGACTTTTAATCAGA      <  1:175730/134‑1
                                                                                                                                  ATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGGTTCGAGCCCTGTATCCCCCATTATATTTTGAGACGTTAGCTCAGTTGGTAGAGCATCTGACTTTTAATCATAG     >  2:1592264/1‑135
                                                                                                                                   TGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGGTTCGAGCCCTGTATCCCCCATTATATTTTGAGCCGTTAGCTCAGTTGGTAGAGCATCTGACTTTTAATCAGAGG    <  2:1796672/135‑1
                                                                                                                                     CTAAATGGTGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACTAGCAGGAGTTCACAGGTTCGAGCCCTGTATCCCCCATTATATTTTGAGCCGTTAGCTCAGTTGGTAGAGCATCTGACTTTTAATCAGAGGGT  <  1:1077534/135‑1
                                                                                                                                     CTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGGTTCGAGCCCTGTATCCCCCATTATATTTTGAGCCGTTAGCTCAGTTGGTAGAGCATCTGACTTTTAATCAGAGGGT  <  1:1551747/135‑1
                                                                                                                                     CTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGGTTCGAGCCCTGTATCCCCCATTATATTTTGAGCCGTTAGCTCAGTTGGTAGAGCATCTGACTTTTAATCAGAGGGT  <  1:1502543/135‑1
                                                                                                                                                                                                                                                                            
CGTAAGTTAGCACAGAGTGTGGTGACGATAGTGAGAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  Annotation_U21_Trimmed_contig_10/134‑1
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGGTTCGAGCCCTGTATCCCCCATTATATTTTGAGCCGTTAGCTCAGTTGGTAGAGCATCTGACTTTTAATCAGAGGGT  <  Annotation_U21_Trimmed_contig_12/1004‑871

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.