| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Annotation_U21_Trimmed_contig_10 | 1 = | 0 (0.000) | 399 (0.310) | 91/256 | 0.2 | 100% | noncoding (117/117 nt) | rasttk_feature_creation_tool=RNA_reps_5S_rRNA | 5S rRNA # 5S ribosomal RNA ‑ 3 prime truncation |
| ? | Annotation_U21_Trimmed_contig_12 | = 1004 | 0 (0.000) | intergenic (‑5/–) | rasttk_feature_creation_tool=tRNAscan‑SE/– | tRNA‑Val‑TAC/– | |||||
Only 100 of 2014 total aligned reads displayed.
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCATGGCAACGTCCTACCCTCGCAGGGGGCGATCCCCCAACTACTCTCGGCGTTAAGAAGCTTGACTTCTGTGTTCGACATGGGAACAGGTATATCCTTCTCACTATCGTCACCACACTCTGTGCTAACTTACGT > Annotation_U21_Trimmed_contig_10/1‑135 | ttagcgatgatggctgacgattcttttaatatgttctcaattaggttattcgtaatctaaatggaacttcattcataccgggctaattttagacacaaaaacagaaccttccaacggaagattcttcgatgtGCa > 1:1409540‑M1/133‑135 (MQ=255) tgagctatagtggcatttatcaactaagatagtatatcatatttatttacgctgtaaaaccaaaatatgccatgtagcttaaatttttagacacaaaaaaagaaccttccaacggaagattcttcgatgtGCAt < 2:1471835‑M1/4‑1 (MQ=255) tctgattaaaagtcagatgctctaccaactgagctaacggctcaaaatataatgggggatacagggctcgaacctgtgacctcctgcttgtaaggcagatgctctcccaactgagctaatcccccatttaGCATg > 1:2386537‑M1/131‑135 (MQ=255) tctgattaaaagtcagatgctctaccaactgagctaacggctcaaaatataatgggggatacagggctcgaacctgtgacctcctgcttgtaaggcagatgctctcccaactgagctaatcccccatttaGCATg > 1:520331‑M1/131‑135 (MQ=255) agcgatgatggctgacgattcttttaatatgttctcaattaggttattcgtaatctaaatggaacttcattcataccgggctaattttagacacaaaaaaagaaccttccaacggaagattcttcgatgtGCAt > 2:2065990‑M1/131‑134 (MQ=255) agcgatgatggctgacgattcttttaatatgttctcaattaggttattcgtaatctaaatggaacttcattcataccgggctaattttagacacaaaaaaagaaccttccaacggaagattcttcgatgtGCAt > 1:947101‑M1/131‑134 (MQ=255) agcgatgatggctgacgattcttttaatatgttctcaattaggttattcgtaatctaaatggaacttcattcataccgggctaattttagacacaaaaaaagaaccttccaacggaagattcttcgatgtGCATg > 1:2626598‑M1/131‑135 (MQ=255) agcgatgatggctgacgattcttttaatatgttctcaattaggttattcgtaatctaaatggaacttcattcataccgggctaattttagacacaaaaaaagaaccttccaacggaagattcttcgatgtGCATg > 1:2677219‑M1/131‑135 (MQ=255) agcgatgatggctgacgattcttttaatatgttctcaattaggttattcgtaatctaaatggaacttcattcataccgggctaattttagacacaaaaaaagaaccttccaacggaagattcttcgatgtGCATg > 1:2720230‑M1/131‑135 (MQ=255) agcgatgatggctgacgattcttttaatatgttctcaattaggttattcgtaatctaaatggaacttcattcataccgggctaattttagacacaaaaaaagaaccttccaacggaagattcttcgatgtGCATg > 1:2206883‑M1/131‑135 (MQ=255) agcgatgatggctgacgattcttttaatatgttctcaattaggttattcgtaatctaaatggaacttcattcataccgggctaattttagacacaaaaaaagaaccttccaacggaagattcttcgatgtGCATg > 2:1567676‑M1/131‑135 (MQ=255) agctatagtggcatttatcaactaagatagtatatcatatttatttacgctgtaaaaccaaaatatgccatgtagcttaaatttttagacacaaaaaaagaaccttccaacggaagattcttcgatgtGCATGGc < 2:1265077‑M1/7‑1 (MQ=255) gattaaaagtcagatgctctaccaactgagctaacggctcaaaatataatgggggatacagggctcgaacctgtgacctcctgcttgtaaggcagatgctctcccaactgagctaatcccccatttaGCATGGc < 2:863696‑M1/7‑1 (MQ=255) tatagtggcatttatcaactaagatagtatatcatatttatttacgctgtaaaaccaaaatatgccatgtagcttaaatttttagacacaaaaaaagaaccttccaacggaagattcttcgatgtGCATGGCAAc < 1:1354530‑M1/10‑1 (MQ=255) atagtggcatttatcaactaagatagtatatcatatttatttacgctgtaaaaccaaaatatgccatgtagcttaaatttttagacacaaaaaaagaaccttccaacggaagattcttcgatgtGCATGGCAACg > 1:256062‑M1/125‑135 (MQ=255) atagtggcatttatcaactaagatagtatatcatatttatttacgctgtaaaaccaaaatatgccatgtagcttaaatttttagacacaaaaaaagaaccttccaacggaagattcttcgatgtGCATGGCAACg > 1:912065‑M1/125‑135 (MQ=255) tagtggcatttatcaactaagatagtatatcatatttatttacgctgtaaaaccaaaatatgccatgtagcttaaatttttagacacaaaaaaagaaccttccaacggaagattcttcgatgtGCATGGCAACg > 2:328803‑M1/124‑134 (MQ=255) gcatttatcaactaagatagtatatcatatttatttacgctgtaaaaccaaaatatgccatgtagcttaaatttttagacacaaaaaaagaaccttccaacggaagattcttcgatgtGCATGGCAACGTCCTa < 2:468165‑M1/16‑1 (MQ=255) agctaacggctcaaaatataatgggggatacagggctcgaacctgtgacctcctgcttgtaaggcagatgctctcccaactgagctaatcccccatttaGCATGGCAACGTCCTACCCTCGCAGGGGGCGATcc < 1:2976503‑M1/35‑1 (MQ=255) gctaacggctcaaaatataatgggggatacagggctcgaacctgtgacctcctgcttgtaaggcagatgctctcccaactgagctaatcccccatttaGCATGGCAACGTCCTACCCTCGCAGGGGGCGATcccc < 1:5786‑M1/37‑1 (MQ=255) ctcaattaggttattcgtaatctaaatggaacttcattcataccgggctaattttagacacaaaaaaagaaccttccaacggaagattcttcgatgtGCATGGCAACGTCCTACCCTCGCAGGGGGCGATccccc > 2:2445607‑M1/98‑135 (MQ=255) atcatatttatttacgctgtaaaaccaaaatatgccatgtagcttaaatttttagacacaaaaaaagaaccttccaacggaagattcttcgatgtGCATGGCAACGTCCt > 2:2744082‑M1/96‑110 (MQ=255) atcatatttatttacgctgtaaaaccaaaatatgccatgtagcttaaatttttagacacaaaaaaagaaccttccaacggaagattcttcgatgtGCATGGCAACGTCCTACCCTCGCAGGGGGCGATccccc < 1:489361‑M1/38‑1 (MQ=255) taggttattcgtaatctaaatggaacttcattcataccgggctaattttagacacaaaaaaagaaccttccaacggaagattcttcgatgtGCATGGCAACGTCCTACCCTCGCAGGGGGCGATCCCCCAactac > 1:872482‑M1/92‑135 (MQ=255) atttatttacgctgtaaaaccaaaatatgccatgtagcttaaatttttagacacaaaaaaagaaccttccaacggaagattcttcgatgtGCATGGCAACGTCCTACCCTCGCAGGGGGCGATCCCCCAacta < 2:10049‑M1/43‑1 (MQ=255) tattcgtaatctaaatggaacttcattcataccgggctaattttagacacaaaaaaagaaccttccaacggaagattcttcgatgtGCATGGCAACGTCCTACCCTCGCAGGGGGCGATCCCCCAACTACtctc < 2:2170905‑M1/48‑1 (MQ=255) tattcgtaatctaaatggaacttcattcataccgggctaattttagacacaaaaaaagaaccttccaacggaagattcttcgatgtGCATGGCAACGTCCTACCCTCGCAGGGGGCGATCCCCCAACTACtctc < 2:948262‑M1/48‑1 (MQ=255) tttacgctgtaaaaccaaaatatgccatgtagcttaaatttatagacacaaaaaaagaaccttccaacggaagattcttcgatgtGCATGGCAACGTCCTACCCTCGCAGGGGGCGATCCCCCAACTACTCTCgg < 1:213576‑M1/50‑1 (MQ=255) gtaatctaaatggaacttcattcataccgggctaattttagacacaaaaaaagaaccttccaacggaagattcttcgatgtGCATGGCAACGTCCTACCCTCGCAGGGGGCGATCCCCCAACTACTCTCGGCGtt < 2:1919646‑M1/54‑1 (MQ=255) aaccaaaatatgccatgtagcttaaatttttagacacaaaaaaagaaccttccaacggaagattcttcgatgtGCATGGCAACGTCCTACCCTCGCAGGGGGCGATCCCCCAACTACTCTCGGCGTTaagaag > 2:1711758‑M1/74‑133 (MQ=255) atacagggctcgaacctgtgacctcctgcttgtaaggcagatgctctcccaactgagctaatcccccatttaGCATGGCAACGTCCTACCCTCGCAGGGGGCGATCCCCCAACTACTCTCGGCGTTAAGAAGCtt < 2:1332607‑M1/63‑1 (MQ=255) ggcggactcgaaccgtcgacaccctgattaacagtcagatgctctaccaactgagctatgccggaataaacGCATGGCAACGTCCTACCCTCGCAGGGGGCGATCCCCCAACTACTCTCGGCGTTAAGAAGCtt < 1:1983987‑M1/63‑1 (MQ=255) caaaatatgccatgtagcttaaatttttagacacaaaaaaagaaccttccaacggaagattcttcgatgtGCATGGCAACGTCCTACCCTCGCAGGGGGCGATCCCCCAACTACTCTCGGCGTTAAGAAGCTTGa > 1:2046300‑M1/71‑135 (MQ=255) cgaacctgtgacctcctgcttgtaaggcagatgctctcccaactgagctaatcccccatttaGCATGGCAACGTCCTACCCTCGCAGGGGGCGATCCCCCAACTACTCTCGGCGTTAAGAAGCTTGACTTCtgtg > 2:750808‑M1/63‑135 (MQ=255) ccgtcgacaccctgattaacagtcagatgctctaccaactgagctatgccggaataaacGCATGGCAACGTCCTACCCTCGCAGGGGGCGATCCCCCAACTACTCTCGGCGTTAAGAAGCTTGACTTCTGTGTTc > 2:502449‑M1/60‑135 (MQ=255) tgtagcttaaatttttagacacaaaaaaagaaccttccaacggaagattcttcgatgtGCATGGCAACGTCCTACCCTCGCAGGGGGCGATCCCCCAACTACTCTCGGCGTTAAGAAGCTTGACTTCTGTGTTc < 2:89756‑M1/76‑1 (MQ=255) ttaaatttttagaaacataaaaagaaccttccaacgtaagattcttagatgtGCATGGCAACGTCCTACCCTCGCAGGGGGCGATCCCCCAAATACTCTCGGCGTTAAGAAGCTTGAATTATGTGTTCGACATgg > 2:705931‑M1/53‑135 (MQ=255) ggctaattttagacacaaaaaaagaaccttccaacggaagattcttcgatgtGCATGGCAACGTCCTACCCTCGCAGGGGGCGATCCCCCAACTACTCTCGGCGTTAAGAAGCTTGACTTCTGTGTTCGACATgg > 2:419659‑M1/53‑135 (MQ=255) ggctaattttagacacaaaaaaagaaccttccaacggaagattcttcgatgtGCATGGCAACGTCCTACCCTCGCAGGGGGCGATCCCCCAACTACTCTCGGCGTTAAGAAGCTTGACTTCTGTGTTCGACATgg > 1:1899453‑M1/53‑135 (MQ=255) ggctaattttagacacaaaaaaagaaccttccaacggaagattcttcgatgtGCATGGCAACGTCCTACCCTCGCAGGGGGCGATCCCCCAACTACTCGCGGCGTTAAGAAGCTTGACTTCTGTGTTCGACATgg > 2:1765248‑M1/53‑135 (MQ=255) ggcgactttgagacacaaaacaagacccttccaccggaagattcgtcgatgtGCATGGCAACGTCCTCCCCTCGCAGGGGGCGATCCCCCAACTACTCTCGGCGTTAAGAAGCTTGACTTCTGTGTTCGACATgg > 2:1970889‑M1/53‑135 (MQ=255) acctcctgcttgtaaggcagatgctctcccaactgagctaatcccccatttaGCATGGCAACGTCCTACCCTCGCAGGGGGCGATCCCCCAACTACTCTCGGCGTTAAGAAGCTTGACTTCTGTGTTCGACATgg > 1:172565‑M1/53‑135 (MQ=255) taaatttttagacacaaaaaaagaaccttccaacggaagattcttcgatgtGCATGGCAACGTCCTACCCTCGCAGGGGGCGATCCCCCAACTACTCTCGGCGTTAAGAAGCTTGACTTCTGTGTTCGACATgg > 1:156979‑M1/52‑134 (MQ=255) taaatttttagacacaaaaaaagaaccttccaacggaagattcttcgatgtGCATGGCAACGTCCTACCCTCGCAGGGGGCGATCCCCCAACTACTCTCGGCGTTAAGAAGCTTGACTTCTGTGTTCGACATgg > 2:2112727‑M1/52‑134 (MQ=255) taaatttttagacacaaaaaaagaaccttccaacggaagattcttcgatgtGCATGGCAACGTCCTACCCTCGCAGGGGGCGATCCCCCAACTACTCTCGGCGTTAAGAAGATTGACTTCTGTGTTCGACATgg > 1:1675708‑M1/52‑134 (MQ=255) accctgattaacagtcagatgctctaccaactgagctatgccggaataaacGCATGGTAACGTCCTACCCTCGCAGGGGGCGAGCCCCCAACTCCTCTCGGCGTTAAGAAGCTTGACTTCTGTGTTCGACATgg > 2:1108585‑M1/52‑134 (MQ=255) accctgattaacagtcagatgctctaccaactgagctatgccggaataaacGCATGGCAACGTCCTACCCTCGCAGGGGGCGATCCCCCAACTACTCTCGGCGTTAAGAAGCTTGACTTCTGTGTTCGACATgg > 1:1062936‑M1/52‑134 (MQ=255) accctgattaacagtcagatgctctaccaactgagctatgccggaataaacGCATGGCAACGTCCTACCCTCGCAGGGGGCGATCCCCCAACTACTCTCGGCGTTAAGAAGCTTGACTTCTGTGTTCGACATgg > 2:2848616‑M1/52‑134 (MQ=255) accctgattaacagtcagatgctctaccaactgagctatgccggaataaacGCATGGCAACGTCCTACCCTCGCAGGGGGCGATCCCCCAACTACTCTCGGCGTTAAGAAGCTTGACTTCTGTGTTCGACATgg > 2:807473‑M1/52‑134 (MQ=255) accctgattaacagtcagatgctctaccaactgagctatgccggaataaacGCATGGCAACGTCCTACCCTCGCAGGGGGCGATCCCCCAACTACTCTCGGCGTTAAGAAGCTTGACTTCTGTGTTCGACATgg > 2:2234981‑M1/52‑134 (MQ=255) accctgattaacagtcagatgctctaccaactgagctatgccggaataaacGCATGGCAACGTCCTACCCTCGCAGGGGGCGATCCCCCAACTACTCTCGGCGTTAAGAAGCTTGACTTCTGTGTTCGACATgg > 1:1102790‑M1/52‑134 (MQ=255) accctgattaacagtcagatgctctaccaactgagctatgccggaataaacGCATGGCAACGTCCTACCCTCGCAGGGGGCGATCCCCCAACTACTCTCGGCGTTAAGAAGCTTGACTTCTGTGTTCGACATgg > 1:1851992‑M1/52‑134 (MQ=255) accctgattaacagtcagatgctctaccaactgagctatgccggaataaacGCATGGCAACGTCCTACCCTCGCAGGGGGCGATCCCCCAACTACTCTCGGCGTTAAGAAGCTTGACTTCTGTGTTCGACATgg > 2:657981‑M1/52‑134 (MQ=255) accctgattaacagtcagatgctctaccaactgagctatgccggaataaacGCATGGCAACGTCCTACCCTCGCAGGGGGCGATCCCCCAACTACTCTCGGCGTTAAGAAGCTTGACTTCTGTGTTCGACATgg > 1:731709‑M1/52‑134 (MQ=255) aattttagacacaaaaaaagaaccttccaacggaagattcttcgatgtGCATGGCAACGTCCTACCCTCGCAGGGGGCGATCCCCCAACTACTCTCGGCGTTAAGAAGCTTGACTTCTGTGTTCGACATGGGAAc < 1:1155231‑M1/87‑1 (MQ=255) attttagacacaaaaaaagaaccttccaacggaagattcttcgatgtGCATGGCAACGTCCTACCCTCGCAGGGGGCGATCCCCCAACTACTCTCGGCGTTAAGAAGCTTGACTTCTGTGTTCGACATGGGAACa > 1:1287403‑M1/48‑135 (MQ=255) aacagtcagatgctctaccaactgagctatgccggaataaacGCATGGCAACGTCCTACCCTCGCAGGGGGCGATCCCCCAACTACTCTCGGCGTTAAGAAGCTTGACTTCTGTGTTCGACATgg > 1:629330‑M1/43‑125 (MQ=255) acaaaaaaagaaccttccaacggaagattcttcgatgtGCATGGCAACGTCCTACCCTCGCAGGGGGCGATCCCCCAACTACTCTCGGCGTTAAGAAGCTTGAATTCTGTGTTCGACATGGGAACAGGTATATcc < 1:2772264‑M1/97‑1 (MQ=255) ggcagatgctctcccaactgagctaatcccccatttaGCATGGCAACGTCCTACCCTCGCAGGGGGCGATCCCCCAACTActc > 1:1788484‑M1/38‑83 (MQ=255) cagatgctctaccaactgagctatgccggaataaacGCATGGCAACGTCCTACCCTCGCAGGGGGCGATCCCCCAACTACTCTCGGCGTTAAGAAGCTTGACTTCTGTGTTCGACATgg < 1:210721‑M1/83‑1 (MQ=255) aaaaaagaaccttccaacggaagattcttcgatgtGCATGGCAACGTCCTACCCTCGCAGGGGGCGATCCCCCAACTACTCTCGGCGTTAAGAAGCTTGACTTCTGTGTTCGACATGGGAACAGGTATATCCTtc > 2:2482646‑M1/36‑135 (MQ=255) aaaagaaccttccaacggaagattcttcgatgtGCATGGCAACGTCCTACCCTCGCAGGGGGCGATCCCCCAACTACTCTCGGCGTTAAGAAGCTTGACTTCTGTGTTCGACATGGGAACAGGTATATCCTtct < 1:1461304‑M1/101‑1 (MQ=255) aaaagaaccttccaacggaagattcttcgatgtGCATGGCAACGTCCTACCCTCGCAGGGGGCGATCCCCCAACTACTCTCGGCGTTAAGAAGCTTGACTTCTGTGTTCGACATGGGAACAGGTATATCCTtct < 1:1620645‑M1/101‑1 (MQ=255) tgctctaccaactgagctatgccggaataaacGCATGGCAACGTCCTACCCTCGCAGGGGGCGATCCCCCAACTACTCTCGGCGTTaag > 1:378382‑M1/33‑89 (MQ=255) tgctctaccaactgagctatgccggaataaacGCATGGCAACGTCCTACCCTCGCAGGGGGCGATCCCCCAACTACTCTCGGCGTTAAGAAGCTTGACTTCTGTGTTCGACATGGGAACAGGTATATCCTtct < 2:2329929‑M1/101‑1 (MQ=255) gctctaccaactgagctatgccggaataaacGCATGTCAACGTCCTACCCTCGCAGGGGGCGATCCCCCAACTACTCTCGGCGTTAAGAAGCTTGACTTCTGTGTTCGACATGGGAACAGGTATATCCTTCTCAc > 2:599609‑M1/32‑135 (MQ=255) aagaaccttccaacggaagattcttcgatgtGCATGGCAACGTCCTACCCTCGCAGGGGGCGATCCCCCAACTACTCTCGGCGTTAAGAAGCTTGACTTCTGTGTTCGACATGGGAACAGGTATATCCTTCTCAc > 2:1392558‑M1/32‑135 (MQ=255) aagaaccttccaacggaagattcttcgatgtGCATGGCAACGTCCTACCCTCGCAGGGGGCGATCCCCCAACTACTCTCGGCGTTAAGAAGCTTGACTTCTGTGTTCGACATGGGAACAGGTATATCCTTCTCAc > 2:1188423‑M1/32‑135 (MQ=255) aagaaccttccaacggaagattcttcgatgtGCATGGCAACGTCCTACCCTCGCAGGGGGCGATCCCCCAACTACTCTCGGCGTTAAGAAGCTTGACTTCTGTGTTCGACATGGGAACAGGTATATCCTTCTCAc > 2:1147463‑M1/32‑135 (MQ=255) aagaaccttccaacggaagattcttcgatgtGCATGGCAACGTCCTACCCTCGCAGGGGGCGATCCCCCAACTACTCTCGGCGTTAAGAAGCTTGACTTCTGTGTTCGACATGGGAACAGGTATATCCTTCTCAc > 1:786384‑M1/32‑135 (MQ=255) gctctcccaactgagctaatcccccatttaGCATGGCAACGTCCTACCCTCGCAGGGGGCGATCCCCCAACTACTCTCGGCGTTAAGAAGCTTGACTTCTGTGTTCGACATGGGAACAGGTATATCCTTCTCAc > 2:1817805‑M1/31‑134 (MQ=255) gaaccttccaacggaagattcttcgatgtGCATGGCAACGTCCTACCCTCGCAGGGGGCGATCCCCCAACTACTCTCGGCGTTAAGAAGCTTGACTTCTGTGTTCGACATGGGAACAGGTATATCCTTCTCACTa > 1:1513820‑M1/30‑135 (MQ=255) gaaccttccaacggaagattcttcgatgtGCATGGCAACGTCCTACCCTCGCAGGGGGCGATCCCCCAACTACTCTCGGCGTTAAGAAGCTTGACTTCTGTGTTCGACATGGGAACAGGTATATCCTTCTCACTa > 1:421462‑M1/30‑135 (MQ=255) gaaccttccaacggaagattcttcgatgtGCATGGCAACGTCCTACCCTCGCAGGGGGCGATCCCCCAACTACTCTCGGCGTTAAGAAGCTTGACTTCTGTGTTCGACATGGGAACAGGTATATCCTTCTCACTa > 2:2575153‑M1/30‑135 (MQ=255) ctaccaactgagctatgccggaataaacGCATGGCAACGTCCTACCCTCGCAGGGGGCGATCCCCCAACTACTCTCGGCGTTAAGAAGCTTGACTTATGTGTTCGACATGGGAACAGGTATATCCTTCTCACTa > 2:129079‑M1/29‑134 (MQ=255) cttccaacggaagattcttcgatgtGCATGGCAACGTCCTACCCTCGCAGGGGGCGATCCCCCAACTACTCTCGGCGTTaag > 2:2799847‑M1/26‑82 (MQ=255) ccaactgagctatgccggaataaacGCATGGCAACGTCCTACCCTCGCAGGGGGCGATCCCCCAACTACTCTCGGCGTTAAGAAGCTTGACTTCTGTGTTCGACATGGGAACAGGTATATCCTTCTCACTATCGt < 2:2910138‑M1/110‑1 (MQ=255) ttccaacggaagattcttcgatgtGCATGGCAACGTCCTACCCTCGCAGGGGGCGATCCCCCAACTACTCTCGGCGTTAAGAAGCTTGACTTCTGTGTTCGACATGGGAACAGGTATATCCTTCTCACTATCGTc > 1:2266055‑M1/25‑135 (MQ=255) ttccaacggaagattcttcgatgtGCATGGCAACGTCCTACCCTCGCAGGGGGCGATCCCCCAACTACTCTCGGCGTTAAGAAGCTTGACTTCTGTGTTCGACATGGGAACAGGTATATCCGTCTCACTATCGTc > 2:537493‑M1/25‑135 (MQ=255) caactgagctatgccggaataaacGCATGGCAACGTCCTACCCTCGCAGGGGGCGATCCCCCAACTACTCTCGGCGTTAAGAAGCTTGACTTCTGTGTTCGACATGGGAACAGGTATATCCTTCTCACTATCGt < 1:1002710‑M1/110‑1 (MQ=255) caactgagctaatcccccatttaGCATGGCAACGTCCTACCCTCGCAGGGGGCGATCCCCCAactac > 1:1246567‑M1/24‑67 (MQ=255) caactgagctaatcccccatttaGCATGGCAACGTCCTACCCTCGCAGGGGGCGATCCCCCAACTACTCTCGGCGTTAAGAAGCTTGACTTCTGTGTTCGACATGGGAACAGGTATATCCTTCTCACTATCGTca > 1:67528‑M1/24‑135 (MQ=255) caactgagctaatcccccatttaGCATGGCAACGTCCTACCCTCGCAGGGGGCGATCCCCCAACTACTCTCGGCGTTAAGAAGCTTGACTTCTGTGTTCGACATGGGAACAGGTATATCCTTCTCACTATCGTc < 1:2923317‑M1/111‑1 (MQ=255) acggaagattcttcgatgtGCATGGCAACGTCCTACCCTCGCAGGGGGCGATCCCCCAACTACTCTCGGCGTTAAGAAGCTTGACTTCTGTGTTCGACATGGGAACAGGTATATCCTTCTCACTATCGTcaccac > 1:2504294‑M1/20‑135 (MQ=255) acggaagattcttcgatgtGCATGGCAACGTCCTACCCTCGCAGGGGGCGATCCCCCAACTACTCTCGGCGTTAAGAAGCTTGACTTCTGTGTTCGACATGGGAACAGGTATATCCTTCTCACTATCGTcaccac > 2:2369584‑M1/20‑135 (MQ=255) acggaagattcttcgatgtGCATGGCAACGTCCTACCCTCGCAGGGGGCGATCCCCCAACTACTCTCGGCGTTAAGAAGCTTGACTTCTGTGTTCGACATGGGAACAGGTATATCCTTCTCACTATCGTcaccac > 2:1076160‑M1/20‑135 (MQ=255) acggaagattattcgatgtGCATGGCAACGTCCTACCCTCGCAGGGGGCGATCCCCCAACTACTCTCGGCGTTAAGAAGCTTGACTTCTGTGTTCGACATGGGAACAGGTATATCCTTCTCACTATCGTcaccac > 1:2862722‑M1/20‑135 (MQ=255) agctatgccggaataaacGCATGGCAACGTCCTACCCTCGCAGGGGGCGATCCCCCAACTACTCTCGGCGTTAAGAAGCTTGACTTCTGTGTTCGACATGGGAACAGGTATATCCTTCTCACTATCGTCACcaca > 2:2957585‑M1/19‑135 (MQ=255) gctatgccggaataaacGCATGGCAACGTCCTACCCTCGCAGGGGGCGATCCCCCAACTACTCTCGGCGTTAAGAAGCTTGACTTCTGTGTTCGACAt > 1:826551‑M1/18‑98 (MQ=255) gctatgccggaataaacGCATGGCAACGTCCTACCCTCGCAGGGGGCGATCCCCCAACTACTCTCGGCGTTAAGAAGCTTGACTTCTGTGTTCGACATGGGAACAGGTATATCCTTCTCACTATCGTCACcaca < 2:1525177‑M1/117‑1 (MQ=255) ctatgccggaataaacGCATGGCAACGTCCTACCCTCGCAGGGGGCGATCCCCCAACTACTCTCGGCGTTAAGAAGCTTGACTTCTGTGTTCGACATGGGAACAGGTATATCCTTCTCACTATCGTCACcaca < 2:2647199‑M1/117‑1 (MQ=255) taatcccccatttaGCATGGCAACGTCCTACCCTCGCAGGGGGCGATCCCCCAACTACTCTCGGCGt < 1:2332742‑M1/53‑1 (MQ=255) atgccggaataaacGCATGGCAACGTCCTACCCTCGCAGGGGGCGATCCCCCAACTACTCTCGGCGTTAAGAAGCTTGACTTCTGTGTTCGACATGGGAACAGGTATATCCTTCTCACTATCGTCACcaca < 2:1610946‑M1/117‑1 (MQ=255) gattcttcgatgtGCATGGCAACGTCCTACCCTCGCAGGGGGCGATCCCCCAACTACTCTCGGCGTTAAGAAGCTTGACTTCTGTGTTCGACATGGGAACAGGTATATCCTTCTCACTATCGTCACCACActct > 1:2471294‑M1/14‑134 (MQ=255) gccggaataaacGCATGGCAACGTCCTACCCTCGCAGGGGGCGATCCCCCAACTACTCTCGGCGTTAAGACGCTTGACTTCTGTGTTCGACATGGGAACAGGTATATCCTTCTCACTATCGTCACCACACTCtgt > 1:314989‑M1/13‑135 (MQ=255) gccggaataaacGCATGGCAACGTCCTACCCTCGCAGGGGGCGATCCCCCAACTACTCTCGGCGTTAAGAAGCTTGACTTCTGTGTTCGACATGGGAACAGGTATATCCTTCTCACTATCGTCACCACACTCtgt > 2:268424‑M1/13‑135 (MQ=255) atcccccatttaGCATGGCAACGTCCTACCCTCGCAGGGGGCGATCCCCCAACTTCTCTCGGCGTTAAGAAGCTTGACTTCTGTGTTCGACATGGGAACAGGTATATCCTTCTCACTATCGTCACCACACTCtgt > 2:1655935‑M1/13‑135 (MQ=255) cggaataaacGCATGGCAACGTCCTACCCTCGCAGGGGGCGATCCCCCAACTACTCTCGGCGTTAAGAAGCTTGACTTCTGTGTTCGACATGGGAACAGGTATATCCTTCTCACTATCGTCACCACACTCTGTGc < 2:1875612‑M1/125‑1 (MQ=255) taaacGCATGGCAACGTCCTACCCTCGCAGGGGGCGATCCCCCAACTACTCTCGGCGTTAAGAAGCTTGACTTCTGTGTTCGACATGGGAACAGGTATATCCTTCTCACTATCGTCACCACACTCTGTGCTAACt < 1:2817718‑M1/130‑1 (MQ=255) tttaGCATGGCAACGTCCTACCCTCGCAGGGGGCGATCCCCCAACTACTCTCGGCGTTAAGAAGCTTGACTTCTGTGTTCGACATGGGAACAGGTATATCCTTCTCACTATCGTCACCACACTCTGTGCTAACt < 2:366065‑M1/130‑1 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCATGGCAACGTCCTACCCTCGCAGGGGGCGATCCCCCAACTACTCTCGGCGTTAAGAAGCTTGACTTCTGTGTTCGACATGGGAACAGGTATATCCTTCTCACTATCGTCACCACACTCTGTGCTAACTTACGT > Annotation_U21_Trimmed_contig_10/1‑135 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |