| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Annotation_U21_Trimmed_contig_1 | = 38 | 87 (0.260) | 17 (0.940) +TGCAAGCAGTGCAGTAACATCACAAGCTGTAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGC |
5/14 | 0.2 | 71.0% | coding (38/567 nt) | rasttk_feature_annotation_tool=annotate_proteins_km er_v2 | hypothetical protein |
| ? | Annotation_U21_Trimmed_contig_1 | 76 = | 167 (0.500) | coding (76/567 nt) | rasttk_feature_annotation_tool=annotate_proteins_km er_v2 | hypothetical protein | |||||
Only 100 of 436 total aligned reads displayed.
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCTTCATATGCTACACATACTAGTTCAGCTGCAACAACTACTAACACAACCAATGTTGCTAGTTCAGCTGCATCATCAAGTGCTACAACAACAACTACTCAAAAT > Annotation_U21_Trimmed_contig_1/1‑207 | gctcagttgcaccatcaagtagtgcagtaacatcacaatctgcaactagcgtagcaccaagttcagctgtatcatcagctgcaatctcagttgcaccatcaagtagcgcagtgacatcacaagctgccactagcg > 1:1025383‑M2/135‑135 (MQ=255)gctcagttgcaccatcaagtagtgcagtaacatcacaagctgcaactagcgtagcaccaagatcagctgtatcatcagctgcaagctcagttgcaccatcaagtagcgcagtgacatcacaagctgcaactagcg > 1:718437‑M2/135‑135 (MQ=255) cagttgcaccatcaagtagtgcagtaacatcacaagctgcaactagcgtagcaccaagttcagctgtatcatcagctgcaagctcagttgcaccatcaagtagcgcagtgacatcacaagctgcaactagcGTa < 1:2539337‑M2/3‑1 (MQ=255) cagttgcaccatcaagtagtgcagtaacatcacaagctgcaactagcgtagcaccaagttcagctgtatcatcagctgcaagctcagttgcaccatcaagtagcgcagtgacatcacaagctgcaactagcGTa < 2:2003352‑M2/3‑1 (MQ=255) actagcaacatcaagtagtgcagtaacatcacaagctgcaactagcgtagcaccaagttcagctgtatcatcagctgcaagctcagttgcaccatcaagtagcgcagtgacatcacaagctgcaactagcGTAGc < 1:839740‑M2/5‑1 (MQ=255) tgcaccatcaagtagcgcagtgacatcacaagctgcaactagcgtagcaccaAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAgtg < 2:1922864‑M1/76‑1 (MQ=255) tgcaccatcaagtagcgcagtgacatcacaagctgcaactagcgtagcaccaAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAgtg > 1:1922835‑M1/53‑128 (MQ=255) tgcaccatcaagtagcgcagtgacatcacaagctgcaactagcgtagcaccaAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAGTGTAGCAcc < 1:999582‑M1/83‑1 (MQ=255) gcacctgcaagcagtgcagtaacatcacaagctgtaactagcgtagcaccaagttcagctgtatcatcagctgcaagctcagttgcaccatcaagtagtgcagtaacatcacaagctgcaactagcGTAGCAcc < 1:1869130‑M2/8‑1 (MQ=255) acctgcaagcagtgcagtaacatcacaagctgtaactagcgtagcaccaagttcagctgtatcatcagctgcaagctcagttgcaccatcaagtagtgcactaacaacacaagcagcaacaagcGtaccaccaag > 1:1825894‑M2/125‑133 (MQ=255) accatcaagtagcgcagtgacatcacaagctgcaactagcgtagcaccaAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAGTGTAGCACCATc < 2:2485665‑M1/86‑1 (MQ=255) cctgcaagcagtgcagtaacatcacaagctgtaactagcgtagcaccaagttcagctgtatcatcagctgcaagctcagttgcaccatcaagtagtgcagtaacatcacaagctgcaactagcGTAGCaccaagt < 2:18748‑M2/12‑4 (MQ=255) cctgcaagcagtgcagtaacatcacaagctgtaactagcgtagcaccaagttcagctgtatcatcagctgcaagctcagttgcaccatcaagtagtgcagtaacatcacaagctgcaactagcGTAGCACcaa < 2:892941‑M2/10‑2 (MQ=255) cctgcaagcagtgcagtaacatcacaagctgtaactagcgtagcaccaagttcagctgtatcatcagctgcaagctcagttgcaccatcaagtagtgcagtaacatcacaagctgcaactagcGTAGCACcaa < 1:2991197‑M2/10‑2 (MQ=255) ccatcaagtagcgcagtgacatcacaagctgcaactagcgtagcaccaAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAGTGTAGCACCATc > 1:2563086‑M1/49‑134 (MQ=255) catcaagtagcgcagtgacatcacaagctgcaactagcgtagcaccaAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAGTGTAGCACCATCaa > 2:726055‑M1/48‑135 (MQ=255) catcaagtagcgcagtgacatcacaagctgcaactagcgtagcaccaAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAGTGTAGCACCATCaa > 1:1502704‑M1/48‑135 (MQ=255) atcaagtagcgcagtgacatcacaagctgcaactagcgtagcaccaAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAGTGTAGCACCATCAAg > 2:2640334‑M1/47‑135 (MQ=255) tcaagtagtgcagtaacatcacaagctgcaactagcgtagcaccaagttcagctgtatcatcagctgcaagctcagttgcaccatcaagtagcgcagtgacatcacaagctgcaactagcGTagcaccaagttca < 2:297195‑M2/15‑7 (MQ=255) tcaagtagtgcagtaacatcacaagctgcaactagcgtagcaccaagttcagctgtatcatcagctgcaagctcagttgcaccatcaagtagcgcagtgacatcacaagctgcaactagcGTagcaccaagttca < 1:1539805‑M2/15‑7 (MQ=255) tcaagtagtgcagtaacatcacaagctgcaactagcgtagcaccaagttcagctgtatcatcagctgcaagctcagttgcaccatcaagtagcgcagtgacatcacaagctgcaactagcGTagcaccaagttca < 1:957470‑M2/15‑7 (MQ=255) tcaagtagtgcagtaacatcacaagctgcaactagcgtagcaccaagttcagctgtatcatcagctgcaagctcagttgcaccatcaagtagcgcagtaacatcacaagctgcaactagaGTAgcaccaagttc > 2:2793347‑M2/121‑129 (MQ=255) tcaagtagcgcagtgacatcacaagctgcaactagcgtagcaccaAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAGTGTAGCACCATCAAg > 2:1220290‑M1/46‑134 (MQ=255) tcaagtagcgcagtgacatcacaagctgcaactagcgtagcaccaAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAGTGTAGCACCATCAAg < 1:1220290‑M1/89‑1 (MQ=255) tcaagtagcgcagtgacatcacaagctgcaactagcgtagcaccaAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTagcaccaagttca < 2:1610901‑M1/90‑7 (MQ=255) gcaagcagtgcagtaacatcacaagctgtaactagcgtagcaccaagttcagctgtatcatcagctgcaagctcagttgcaccatcaagtagagcagttacatcacaagctgcaactagcGTAgcaccaagttc > 1:2443477‑M2/121‑129 (MQ=255) agtagtgcagtaacatcacaagctgcaactagcgtagcaccaagttcagctgtatcatcagctgcaagctcagttgcaccatcaagtagcgcagtgacatcgcaagctgcaactagcGTAGCACcaa < 2:681290‑M2/10‑2 (MQ=255) agtagtgcagtaacatcacaagctgcaactagcgtagcaccaagttcagctgtatcatcagctgcaagctcagttgcaccatcaagtagcgcagtgacatcacaagctgcaactagcGTagcaccaagttca < 2:1044313‑M2/15‑7 (MQ=255) agtagtgcagtaacatcacaagctgcaactagcgtagcaccaagttcagctgtatcatcagctgcaagctcagttgcaccatcaagtagcgcagtgacatcacaagctgcaactagcGTAgcaccaagttc > 2:1566946‑M2/118‑126 (MQ=255) agtagtgcagtaacatcacaagctgcaactagcgtagcaccaagttcagctgtatcatcagctgcaagctcagttgcaccatcaagtagcgcagtgacatcacaagctgcaactagcGTAgcaccaagttc > 1:2741042‑M2/118‑126 (MQ=255) agtagcgcagtgacatcacaagctgcaactagcgtagcaccaAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAGTGTAGCACCATCAAgcgc < 2:1407985‑M1/92‑1 (MQ=255) agtagcgcagtgacatcacaagctgcaactagcgtagcaccaAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGAAACTAGCGTAgcaccaacttc < 2:2247798‑M1/89‑6 (MQ=255) tagcgcagtgacatcacaagctgcaactagcgtagcaccaAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAGTGTCGCACCATCAAGCtctgc < 2:2690266‑M1/95‑1 (MQ=255) cagtgacatcacaagctgcaactagcgtagcaccaAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACa > 1:11994‑M1/36‑134 (MQ=255) agtgacatcacaagctgcaactagcgtagcaccaAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACaa < 2:1370078‑M1/100‑1 (MQ=255) agtaacatcacaagctgtaactagcgtagcaccaagttcagctgtatcatcagctgcaagctcagttgcaccatcaagtagtgcagtaacatcacaagctgcaactagcGTAGCACcaa < 2:74666‑M2/10‑2 (MQ=255) gttacatcacaagctgcaactagcgtagcaccaAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAAc > 1:478608‑M1/34‑134 (MQ=255) taacatcacaagctgtaactagcgtagcaccaagttcagctgtatcatcagctgcaagctcagttgcaccatcaagtagtgcagtaacatcacaagctgcaactagcGTa < 2:2206016‑M2/3‑1 (MQ=255) acatcacaagctgcaactagcgtagcaccaAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTcc > 2:1944515‑M1/31‑134 (MQ=255) acatcacaagctgcaactagcgtagcaccaAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTcc > 1:1461772‑M1/31‑134 (MQ=255) acatcacaagctgcaactagcgtagcaccaAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTcc > 1:1236326‑M1/31‑134 (MQ=255) acatcacaagctgcaactagcgtagcaccaAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTcc > 1:2617942‑M1/31‑134 (MQ=255) acatcacaagctgcaactagcgtagcaccaAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTcc > 1:2351‑M1/31‑134 (MQ=255) acatcacaagctgaaactatcgtagctccaTGTTCAGCTGTATCCTCAGCTGCTATCTATGTTGCACCATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTcc > 2:1357540‑M1/31‑134 (MQ=255) catcacaagctgcaactagcgtagcaccaagttcagctgtatcatcagctgcaagctcagttgcaccatcaagtagcgcagtgacatcacaagctgcaactagcGTAGCACcaa > 1:193100‑M2/105‑113 (MQ=255) catcacaagctgcaactagcgtagcaccaAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCGGTAACATCACAAGCTGAAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCtt < 1:1739290‑M1/106‑1 (MQ=255) cacaagctgcaactagcgtagcaccaAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCTTCat > 2:2092294‑M1/27‑135 (MQ=255) cacaagctgcaactagcgtagcaccaAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCTTCat > 2:2832574‑M1/27‑135 (MQ=255) caagctgtaactagcgtagcaccaagttcagctgtatcatcagctgcaagctcagttgcaccatcaagtagagcagtaacatcacaagctgcaactagcGTAGc > 1:2062110‑M2/100‑104 (MQ=255) caagctgcaactagcgtagcaccaagttcagctgtatcatcagctgcaagctcagttgcaccatcaagtagcgcagtgacatcacaagctgcaactagcGTa > 1:1148993‑M2/100‑102 (MQ=255) caagctgcaactagcgtagcaccaAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCTTCata < 2:2533413‑M1/110‑1 (MQ=255) gctgcaactagcgtagcaccaagttcagctgtatcatcagctgcaagctcagttgcaccatcaagtagcgcagtgacatcacaagctgcaactagcGTAGCACcaa < 2:1182877‑M2/10‑2 (MQ=255) gctgcaactagcgtagcaccaAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCTTCATATGCt > 2:1398417‑M1/22‑135 (MQ=255) gctgcaactagcgtagcaccaAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCTTCATATGCt > 2:123381‑M1/22‑135 (MQ=255) gctgcaactagcgtagcaccaAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCTTCATATGCt > 2:2759696‑M1/22‑135 (MQ=255) ctgtaactagcgtagcaccaagttcagctgtatcatcagctgcaagctcagttgcaccatcaagtagtgcagtaacatcacaagctgcaactagcGTAGcaccaagtt < 1:520459‑M2/13‑5 (MQ=255) tgcaactagcgtagcaccaAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCTTCATATGCTa < 1:2282321‑M1/115‑1 (MQ=255) gcaactagagtagcaccaAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCTTCATATGCTaca > 1:2849044‑M1/19‑135 (MQ=255) caactagcgtagcaccaAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCTTCATATGCTacac < 1:899674‑M1/118‑1 (MQ=255) actagcgtagcaccaAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCTTCATATGCTAcaca < 1:2099084‑M1/119‑1 (MQ=255) ccaAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCTTCATATGCTACACATACTAGTTCAGc < 2:1539225‑M1/131‑1 (MQ=255) ccaAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCTTCATATGCTACACATACTAGTTCAGc < 1:1968938‑M1/131‑1 (MQ=255) tCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCTTCATATGCTACACATACTAGTTCAGCTGcaac > 1:2216117/1‑134 (MQ=255) tCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCTTCATATGCTACACATACTAGTTCAGCTGcaac > 2:831350/1‑134 (MQ=255) cAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCTTCATATGCTACACATACTAGTTCAGCTGcaacaa < 2:525846/135‑1 (MQ=255) tcaGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCTTCATATGCTACACATACTAGTTCAGCTGc > 1:1783020/1‑119 (MQ=255) tcaGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCTTCATATGCTACACATACTAGTTCAGCTGCAACAACTACTAacac > 2:1522851/1‑134 (MQ=255) aaGCTCAGTTGCACCATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCTTCATATGCTACACATACTAGTTCAGCTGCAACAACTACTAACACAACCAATGt > 2:2926429/1‑135 (MQ=255) aGCTCAGTTGCACCATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCTTCATATGCTACACATACTAGTTCAGCTGCAACAACTACTAACACAACCAATGt < 2:1307633/134‑1 (MQ=255) tGCACCATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCTTCATATGCTACACATACTAGTTCAGCTGCAACAactac > 1:2237201/1‑111 (MQ=255) gCACCATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCTTCATATGCTACACATACTAGTTCAGCTGCAACAACTACTTACACAACCAATGTTGCTAGTTCa < 2:1129479/135‑1 (MQ=255) cACCATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCTTCATATGCTACACATACTAGTTCAGCTGCAACAACTACTAACACAACCAATGTTGCTAGTTCAg < 1:1665344/135‑1 (MQ=255) ccATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCTTCATATGCTACACATACTAGTTCAGCTGCAACAACTCCTAACACAACCAATGTTGCTAGTTCAGc < 2:1677884/134‑1 (MQ=255) ccATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCTTCATATGCTACACATACTAGTTCAGCTGCAACAACTACTAACACAACCAATGTTGCTAGTTCAGc < 2:1710109/134‑1 (MQ=255) ccATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCTTCATATGCTACACATACTAGTTCAGCTGCAACAACTACTAACACAACCAATGTTGCTAGTTCAGCt < 2:1479896/135‑1 (MQ=255) aaGTAGTGCGGTAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCTTCATATGCTACACATACTAGTTCAGCTGCAACAACTACTAACACAACCAATGTTGCTAGTTCAGCTGcatc < 1:392879/135‑1 (MQ=255) agtagtGCGGTAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCTTCATATGCTACACATACTAGTTCAGCTGCAACAACTACTAACACAACCAATGt < 1:1011418/116‑1 (MQ=255) agtagtGCGGTAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCTTCATATGCTACACATACTAGTTCAGCTGCAACAACTACTAACACAACCAATGTTGCTAGTTCAGCTGcatca < 2:234944/135‑1 (MQ=255) agtagtGCGGTAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCTTCATATGCTACACATACTAGTTCAGCTGCAACAACTACTAACACAACCAATGTTGCTAGTTCAGCTGcatc > 2:917624/1‑134 (MQ=255) agtagtGCGGTAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCTTCATATGCTACACATACTAGTTCAGCTGCAACAACTACTAACACAACCAATGTTGCTAGTTCAGCTGcatc > 2:2614219/1‑134 (MQ=255) agtagtGCGGTAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCTTCATATGCTACACATACTAGTTCAGCTGCAACAACTACTAACACAACCAATGTTGCTAGTTCAGCTGcatc > 2:2037120/1‑134 (MQ=255) agtagtGCGGTAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCTTCATATGCTACACATACCAGTTCAGCTGCAACAACTACTAACACAACCAATGTTGCTAGTTCAGCTGcatc > 2:316995/1‑134 (MQ=255) ggTAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCTTCat < 1:427683/59‑1 (MQ=255) ggTAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCTTCat > 2:427683/1‑59 (MQ=255) ggTAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCTTCATATGCTACACATACTAGTTCAGCTGCAACAACTACTAACACAACCAATGTTGCTAGTTCAGCTGCATCATCAAGTGc > 2:577512/1‑135 (MQ=255) tAACATCACAAGCTGTAACTAGTGTAGCACCATCaa > 1:143015/1‑36 (MQ=255) tAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCTTCATATGCTACACATACTAGTTCAGCTGCAACAACTACTAACACAACCAATGTTGCTAGTTCAGCTGCATCATCAAGTGCTa > 2:2417849/1‑135 (MQ=255) tAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCTTCATATGCTACACATACTAGTTCAGCTGCAACAACTACTAACACAACCAATGTTGCTAGTTCAGCTGCATCATCAAGTGCTa > 2:1443267/1‑135 (MQ=255) tAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCTTCATATGCTACACATACTAGTTCAGCTGCAACAACTACTAACACAACCAATGTTGCTAGTTCAGCTGCATCATCAAGTGCTa > 1:59429/1‑135 (MQ=255) tAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCTTCATATGCTACACATACTAGTTCAGCTGCAACAACTACTAACACAACCAATGTTGCTAGTTCAGCTGCATCATCAAGTGCTa > 2:36455/1‑135 (MQ=255) tAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCTTCATATGCTACACATACTAGTTCAGCTGCAACAACTACTAACACAACCAATGTTGCTAGTTCAGCTGCATCATCAAGTGCTa > 1:82261/1‑135 (MQ=255) tCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCTTCATATGCTACACATACTAGTTCAGCTGCAACAACTACTAACACAACCAATGTTGCTAGTTCAGCTGCATCATCAAGTGCTacaac > 1:2173422/1‑134 (MQ=255) caAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCTTCATATGCTACACATACTAGTTCAGCTGCAACAACTACTAACACAACCAATGTTGCTAGTTCAGCTGCATCATCAAGTGCTacaacaaca < 1:1350653/135‑1 (MQ=255) caAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCTTCATATGCTACACATACTAGTTCAGCTGCAACAACTACTAACACAACCAATGTTGCTAGTTCAGCTGCATCATCAAGTGCTacaacaaca < 1:1893764/135‑1 (MQ=255) caAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCTTCATATGCTACACATACTAGTTCAGCTGCAACAACTACTAACACAACCAATGTTGCTAGTTCAGCTGCATCATCAAGTGCTacaacaac > 1:923655/1‑134 (MQ=255) caAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCTTCATATGCTACACATACTAGTTCAGCTGCAACAACTACTAACACAACCAATGTTGCTAGTTCAGCTGCATCATCAAGTGCTacaacaac > 1:2515123/1‑134 (MQ=255) caAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCTTCATATGCTACACATACTAGTTCAGCTGCAACAACTACTAACACAACCAATGTTGCTAGTTCAGCTGCATCATCAAGTGCTacaacaac > 2:2278308/1‑134 (MQ=255) tGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCTTCATATGCTACACATACTAGTTCAGCTGCAACAACTACTAACACAACCAATGTTGCTAGTTCAGCTGCATCATCAAGTGCTACAACAACAacta > 1:772714/1‑134 (MQ=255) aCTAGTGTAGCACCATCAAGCGCTGCTACAACTCCTTCATATGCTACACATACTAGTTCAGCTGCAACAACTACTAACACAACCAATGTTGCTAGTTCAGCTGCATCATCAAGTGCTACAACAACAACTACTCaa > 2:2142500/1‑135 (MQ=255) cgaGTGTAGCACCATCAAGCGCTGCTACAACTCCTTCATATGCTACACATACTAGTTCAGCTGCAACAACTACTAACACAACCAATGTTGCTAGTTCAGCTGCATCATCAAGTGCTACAACAACAACTACTCaaa < 2:1765726/133‑1 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCGGTAACATCACAAGCTGTAACTAGTGTAGCACCATCAAGCGCTGCTACAACTCCTTCATATGCTACACATACTAGTTCAGCTGCAACAACTACTAACACAACCAATGTTGCTAGTTCAGCTGCATCATCAAGTGCTACAACAACAACTACTCAAAAT > Annotation_U21_Trimmed_contig_1/1‑207 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |