| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | AE015451_phaM1 | 3,556,355 | Δ14,665 bp | [PP_3140 CDS (Glycosyl transferase_ group 2 family protein)]–[yneJ CDS (putative DNA‑binding transcriptional regulator_ LysR‑type)] | [PP_3140 CDS (Glycosyl transferase_ group 2 family protein)], PP_3141 CDS (Glycosyl transferase_ WecB_TagA_CpsF family), PP_3142 CDS (putative Sugar transferase), PP_3143 CDS (Transcriptional regulator_ LysR family), tdcG‑III CDS (L‑serine dehydratase), PP_3145 CDS (conserved protein of unknown function), PP_3146 CDS (putative Oxidoreductase), potF‑II CDS (putrescine‑binding periplasmic protein), PP_3148 CDS (putative Glutamine synthetase), PP_3149 CDS (Transcriptional regulator_ AraC family), PP_3150 CDS (conserved protein of unknown function), sad‑II CDS (NAD+‑dependent succinate semialdehyde dehydrogenase), [yneJ CDS (putative DNA‑binding transcriptional regulator_ LysR‑type)] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | AE015451_phaM1 | 3556355 | 3571019 | 14665 | 683 [0] | [0] 692 | [PP_3140 CDS (Glycosyl transferase_ group 2 family protein)]–[yneJ CDS (putative DNA‑binding transcriptional regulator_ LysR‑type)] | [PP_3140 CDS (Glycosyl transferase_ group 2 family protein)],PP_3141 CDS (Glycosyl transferase_ WecB_TagA_CpsF family),PP_3142 CDS (putative Sugar transferase),PP_3143 CDS (Transcriptional regulator_ LysR family),tdcG‑III CDS (L‑serine dehydratase),PP_3145 CDS (conserved protein of unknown function),PP_3146 CDS (putative Oxidoreductase),potF‑II CDS (putrescine‑binding periplasmic protein),PP_3148 CDS (putative Glutamine synthetase),PP_3149 CDS (Transcriptional regulator_ AraC family),PP_3150 CDS (conserved protein of unknown function),sad‑II CDS (NAD+‑dependent succinate semialdehyde dehydrogenase),[yneJ CDS (putative DNA‑binding transcriptional regulator_ LysR‑type)] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451_phaM1 | = 3556354 | 0 (0.000) | 646 (0.800) | 121/254 | 0.2 | 100% | coding (771/1188 nt) | PP_3140 CDS (Glycosyl transferase_ group 2 family protein) | |
| ? | AE015451_phaM1 | 3571020 = | 0 (0.000) | coding (49/867 nt) | yneJ CDS (putative DNA‑binding transcriptional regulator_ LysR‑type) | ||||||
Only 100 of 697 total aligned reads displayed.
CGATCTGAGTCTGATCAACCTGGCCAATGGTCATCTGGTCGAGGATGTGAAGCTGGGCCTGGACCTTTGCCAGCAGGGCAAACCGCCTGCTTTCTGCCCCGAGGCACTGGTCACTAGCCAGTTCCCACTTAGCCAGCAGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451_phaM1/3556213‑3556354‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcagggcAGCATCAGCGCCGCCGCGCAGCACATCCATCGGGTGCCGTCGAACCTGACCACGCGCATCAAGCAACTGGAGGAGGACCTGGGTGTAGAGCTGTTCATTCGCGAGAAGAGCCGCCTGCGCCTGTCGCCTGCGGGTT > AE015451_phaM1/3571020‑3571155 CGATCTGAGTCTGATCAACCTGGCCAATGGTCATCTGGTCGAGGATGTGAAGCTGGGCCTGGACCTTTGCCAGCAGGGCAAACCGCCTGCTTTCTGCCCCGAGGCACTGGTCACTAGCCAGTTCCCACTTAGCCAGC > 1:2887159/1‑137 ATCTGAGTCTGATCAACCTGGCCAATGGTCATCTGGTCGAGGATGTGAAGCTGGGCCTGGACCTTTGCCAGCAGGGCAAACCGCCTGCTTTCTGCCCCGAGGCACTGGTCACTAGCCAGTTCCCACTTAGCCAGCAG < 2:4686137/137‑1 CTGATCAACCTGGCCAATGGTCATCTGGTCGAGGATGTGAAGCTGGGCCTGGACCTTTGCCAGCAGGGCAAACCGCCTGCTTTCTGCCCCGAGGCACTGGTCACTAGCCAGTTCCCACTTAGCCAGCAGGGCAGCAT > 1:7574921/1‑137 CTGATCAACCTGGCCAATGGTCATCTGGTCGAGGATGTGAAGCTGGGCCTGGACCTTTGCCAGCAGGGCAAACCGCCTGCTTTCTGCCCCGAGGCACTGGTCACTAGCCAGTTCCCACTTAGCCAGCAGGGCAGCAT > 1:5827124/1‑137 AACCTGGCCAATGGTCATCTGGTCGAGGATGTGAAGCTGGGCCTGGACCTTTGCCAGCAGGGCAAACCGCCTGCTTTCTGCCCCGAGGCACTGGTCACTAGCCAGTTCCCACTTAGCCAGCAGGGCAGCATCAGCGC > 2:9133777/1‑137 AACCTGGCCAATGGTCATCTGGTCGAGGATGTGAAGCTGGGCCTGGACCTTTGCCAGCAGGGCAAACCGCCTGCTTTCTGCCCCGAGGCACTGGTCACTAGCCAGTTCCCACTTAGCCAGCAGGGCAGCATCAGCGC > 2:3941699/1‑137 AACCTGGCCAATGGTCATCTGGTCGAGGATGTGAAGCTGGGCCTGGACCTTTGCCAGCAGGGCAAACCGCCTGCTTTCTGCCCCGAGGCACTGGTCACTAGCCAGTTCCCACTTAGCCAGCAGGGCAGCATCAGCGC > 2:15187115/1‑137 AACCTGGCCAATGGTCATCTGGTCGAGGATGTGAAGCTGGGCCTGGACCTTTGCCAGCAGGGCAAACCGCCTGCTTTCTGCCCCGAGGCACTGGTCACTAGCCAGTTCCCACTTAGCCAGCAGGGCAGCATCAGCGC > 2:10565858/1‑137 AACCTGGCCAATGGTCATCTGGTCGAGGATGTGAAGCTGGGCCTGGACCTTTGCCAGCAGGGCAAACCGCCTGCTTTCTGCCCCGAGGCACTGGTCACTAGCCAGTTCCCACTTAGCCAGCAGGGCAGCATCAGCGC > 1:13907419/1‑137 CTGGCCAATGGTCATCTGGTCGAGGATGTGAAGCTGGGCCTGGACCTTTGCCAGCAGGGCAAACCGCCTGCTTTCTGCCCCGAGGCACTGGTCACTAGCCAGTTCCCACTTAGCCAGCAGGGCAGCATCAGCGCCGC < 1:10078480/137‑1 TGGCCAATGGTCATTTGGTCGAGGATGTGAAGCTGGGCCTGGACCTTTGCCAGCAGGGCAAACCGCCTGCTTTCTGCCCCGAGGCACTGGTCACTAGCCAGTTCCCACTTAGCCAGCAGGGCAGCATCAGCGCCGCC < 2:16731363/137‑1 TGGCCAATGGTCATCTGGTCGAGGATGTGAAGCTGGGCCTGGACCTTTGCCAGCAGGGCAAACCGCCTGCTTTCTGCCCCGAGGCACTGGTCACTAGCCAGTTCCCACTTAGCCAGCAGGGCAGCATCAGCGCCGCC > 1:6902628/1‑137 AATGGTCATCTGGTCGAGGATGTGAAGCTGGGCCTGGACCTTTGCCAGCAGGGCAAACCGCCTGCTTTCTGCCCCGAGGCACTGGTCACTAGCCAGTTCCCACTTAGCCAGCAGGGCAGCATCAGCGCCGCCGCGCA < 1:10288830/137‑1 AATGGTCATCTGGTCGAGGATGTGAAGCTGGGCCTGGACCTTTGCCAGCAGGGCAAACCGCCTGCTTTCTGCCCCGAGGCACTGGTCACTAGCCAGTTCCCACTTAGCCAGCAGGGCAGCATCAGCGCCGCCGCGCA < 2:9673870/137‑1 AATGGTCATCTGGTCGAGGATGTGAAGCTGGGCCTGGACCTTTGCCAGCAGGGCAAACCGCCTGCTTTCTGCCCCGAGGCACTGGTCACTAGCCAGTTCCCACTTAGCCAGCAGGGCAGCATCAGCGCCGCCGCGCA < 2:17422020/137‑1 TGGTCGAGGATGTGAAGCTGGGCCTGGACCTTTGCCAGCAGGGCAAACCGCCTGCTTTCTGCCCCGAGGCACTGGTCACTAGCCAGTTCCCACTTAGCCAGCAGGGCAGCATCAGCGCCGCCGCGCAGCACATCCAT > 2:4244686/1‑137 TGGTCGAGGATGTGAAGCTGGGCCTGGACCTTTGCCAGCAGGGCAAACCGCCTGCTTTCTGCCCCGAGGCACTGGTCACTAGCCAGTTCCCACTTAGCCAGCAGGGCAGCATCAGCGCCGCCGCGCAGCACATCCAT > 2:18601753/1‑137 TGGTCGAGGATGTGAAGCTGGGCCTGGACCTTTGCCAGCAGGGCAAACCGCCTGCTTTCTGCCCCGAGGCACTGGTCACTAGCCAGTTCCCACTTAGCCAGCAGGGCAGCATCAGCGCCGCCGCGCAGCACATCCAT > 2:18777305/1‑137 TGGTCGAGGATGTGAAGCTGGGCCTGGACCTTTGCCAGCAGGGCAAACCGCCTGCTTTCTGCCCCGAGGCACTGGTCACTAGCCAGTTCCCACTTAGCCAGCAGGGCAGCATCAGCGCCGCCGCGCAGCACATCCAT > 1:8216277/1‑137 TGGTCGAGGATGTGAAGCTGGGCCTGGACCTTTGCCAGCAGGGCAAACCGCCTGCTTTCTGCCCCGAGGCACTGGTCACTAGCCAGTTCCCACTTAGCCAGCAGGGCAGCATCAGCGCCGCCGCGCAGCACATCCAT > 1:3300681/1‑137 TGGTCGAGGATGTGAAGCTGGGCCTGGACCTTTGCCAGCAGGGCAAACCGCCTGCTTTCTGCCCCGAGGCACTGGTCACTAGCCAGTTCCCACTTAGCCAGCAGGGCAGCATCAGCGCCGCCGCGCAGCACATCCAT > 2:3484902/1‑137 TGGTCGAGGATGTGAAGCTGGGCCTGGACCTTTGCCAGCAGGGCAAACCGCCTGCTTTCTGCCCCGAGGCACTGGTCACTAGCCAGTTCCCACTTAGCCAGCAGGGCAGCATCAGCGCCGCCGCGCAGCACATCCAT > 1:18827005/1‑137 TGGTCGAGGATGTGAAGCTGGGCCTGGACCTTTGCCAGCAGGGCAAACCGCCTGCTTTCTGCCCCGAGGCACTGGTCACTAGCCAGTTCCCACTTAGCCAGCAGGGCAGCATCAGCGCCGCCGCGCAGCACATCCAT > 2:1164956/1‑137 TGGTCGAGGATGTGAAGCTGGGCCTGGACCTTTGCCAGCAGGGCAAACCGCCTGCTTTCTGCCCCGAGGCACTGGTCACTAGCCAGTTCCCACTTAGCCAGCAGGGCAGCATCAGCGCCGCCGCGCAGCACATCCAT > 1:14520798/1‑137 GGTCGAGGATGTGAAGCTGGGCCTGGACCTTTGCCAGCAGGGCAAACCGCCTGCTTTCTGCCCCGAGGCACTGGTCACTAGCCAGTTCCCACTTAGCCAGCAGGGCAGCATCAGCGCCGCCGCGCAGCACATCCATC < 2:404268/137‑1 GTCGAGGATGTGAAGCTGGGCCTGGACCTTTGCCAGCAGGGCAAACCGCCTGCTTTCTGCCCCGAGGCACTGGTCACTAGCCAGTTCCCACTTAGCCAGCAGGGCAGCATCAGCGCCGCCGCGCAGCACATCCATCG < 1:1341238/137‑1 GTCGAGGATGTGAAGCTGGGCCTGGACCTTTGCCAGCAGGGCAAACCGCCTGCTTTCTGCCCCGAGGCACTGGTCACTAGCCAGTTCCCACTTAGCCAGCAGGGCAGCATCAGCGCCGCCGCGCAGCACATCCATCG < 2:149792/137‑1 GAGGATGTGAAGCTGGGCCTGGACCTTTGCCAGCAGGGCAAACCGCCTGCTTTCTGCCCCGAGGCACTGGTCACTAGCCAGTTCCCACTTAGCCAGCAGGGCAGCATCAGCGCCGCCGCGCAGCACATCCATCGGGT > 1:8848034/1‑137 AGGATGTGAAGCTGGGCCTGGACCTTTGCCAGCAGGGCAAACCGCCTGCTTTCTGCCCCGAGGCACTGGTCACTAGCCAGTTCCCACTTAGCCAGCAGGGCAGCATCAGCGCCGCCGCGCAGCACATCCATCGGGTG < 1:6465393/137‑1 GGATGTGAAGTTGGGCCTGGACCTTTGCCAGCAGGGCAAACCGCCTGCTCTCTGCCCCGAGGTACTGGTCACTAGCTAGTTCCCACTTAGCCAGCAGGGCAGTATCAGTGCCGCCGCGCAGCACATCAATCGGGGGC < 2:5753581/137‑1 GGATGTGAAGCTGGGCCTGGACCTTTGCCAGCAGGGCAAACCGCCTGCTTTCTGCCCCGAGGCACTGGTCACTAGCCAGTTCCCACTTAGCCAGCAGGGCAGCATCAGCGCCGCCGCGCAGCACATCCATCGGGTGC < 2:5463277/137‑1 AGCTGGGCCTGGACCTTTGCCAGCAGGGCAAACCGCCTGCTTTCTGCCCCGAGGCACTGGTCACTAGCCAGTTCCCACTTAGCCAGCAGGGCAGCATCAGCGCCGCCGCGCAGCACATCCATCGGGTGCCGTCGAAC > 1:14882078/1‑137 AGCTGGGCCTGGACCTTTGCCAGCAGGGCAAACCGCCTGCTTTCTGCCCCGAGGCACTGGTCACTAGCCAGTTCCCACTTAGCCAGCAGGGCAGCATCAGCGCCGCCGCGCAGCACATCCATCGGGTGCCGTCGAAC > 2:14738088/1‑137 AGCTGGGCCTGGACCTTTGCCAGCAGGGCAAACCGCCTGCTTTCTGCCCCGAGGCACTGGTCACTAGCCAGTTCCCACTTAGCCAGCAGGGCAGCATCAGCGCCGCCGCGCAGCACATCCATCGGGTGCCGTCGAAC > 2:8572187/1‑137 GCTGGGCCTGGACCTTTGCCAGCAGGGCAAACCGCCTGCTTTCTGCCCCGAGGCACTGGTCACTAGCCAGTTCCCACTTAGCCAGCAGGGCAGCATCAGCGCCGCCGCGCAGCACATCCATCGGGTGCCGTCGAACC < 1:9456273/137‑1 GGCCTGGACCTTTGCCAGCAGGGCAAACCGCCTGCTTTCTGCCCCGAGGCACTGGTCACTAGCCAGTTCCCACTTAGCCAGCAGGGCAGCATCAGCGCCGCCGCGCAGCACATCCATCGGGTGCCGTCGAACCTGAC < 2:6848055/137‑1 GGCCTGGACCTTTGCCAGCAGGGCAAACCGCCTGCTTTCTGCCCCGAGGCACTGGTCACTAGCCAGTTCCCACTTAGCCAGCAGGGCAGCATCAGCGCCGCCGCGCAGCACATCCATCGGGTGCCGTCGAACCTGAC < 2:13318795/137‑1 GCCTGGACCTTTGCNAGCAGGGCAAACCGCCTGCTTTCTGCCCCGAGGCACTGGTCACTAGCCAGTTCCCACTTAGCCAGCAGGGCAGCATCAGCGCCGCCGCGCAGCACATCCATCGGGTGCCGTCGAACCTGACC < 1:7232840/137‑1 GCCTGGACCTTTGCCAGCAGGGCAAACCGCCTGCTTTCTGCCCCGAGGCACTGGTCACTAGCCAGTTCCCACTTAGCCAGCAGGGCAGCATCAGCGCCGCCGCGCAGCACATCCATCGGGTGCCGTCGAACCTGACC < 1:973591/137‑1 GCCTGGACCTTTGCCAGCAGGGCAAACCGCCTGCTTTCTGCCCCGAGGCACTGGTCACTAGCCAGTTCCCACTTAGCCAGCAGGGCAGCATCAGCGCCGCCGCGCAGCACATCCATCGGGTGCCGTCGAACCTGACC < 1:3905980/137‑1 CTGGACCTTTGCCAGCAGGGCAAACCGCCTGCTTTCTGCCCCGAGGCACTGGTCACTAGCCAGTTCCCACTTAGCCAGCAGGGCAGCATCAGCGCCGCCGCGCAGCACATCCATCGGGTGCCGTCGAACCTGACCAC > 1:13985006/1‑137 CTGGACCTTTGCCAGCAGGGCAAACCGCCTGCTTTCTGCCCCGAGGCACTGGTCACTAGCCAGTTCCCACTTAGCCAGCAGGGCAGCATCAGCGCCGCCGCGCAGCACATCCATCGGGTGCCGTCGAACCTGACCAC > 1:18023701/1‑137 CTGGACCTTTGCCAGCAGGGCAAACCGCCTGCTTTCTGCCCCGAGGCACTGGTCACTAGCCAGTTCCCACTTAGCCAGCAGGGCAGCATCAGCGCCGCCGCGCAGCACATCCATCGGGTGCCGTCGAACCTGACCAC > 2:17192277/1‑137 GACCTTTGCCAGCAGGGCAAACCGCCTGCTTTCTGCCCCGAGGCACTGGTCACTAGCCAGTTCCCACTTAGCCAGCAGGGCAGCATCAGCGCCGCCGCGCAGCACATCCATCGGGTGCCGTCGAACCTGACCACGCG < 1:10608615/137‑1 CTTTGCCAGCAGGGCAAACCGCCTGCTTTCTGCCCCGAGGCACTGGTCACTAGCCAGTTCCCACTTAGCCAGCAGGGCAGCATCAGCGCCGCCGCGCAGCACATCCATCGGGTGCCGTCGAACCTGACCACGCGCAT < 2:5001034/137‑1 CCAGCAGGGCAAACCGCCTGCTTTCTGCCCCGAGGCACTGGTCACTAGCCAGTTCCCACTTAGCCAGCAGGGCAGCATCAGCGCCGCCGCGCAGCACATCCATCGGGTGCCGTCGAACCTGACCACGCGCATCAAGC < 1:4848347/137‑1 CAGCAGGGCAAACCGCCTGCTTTCTGCCCCGAGGCACTGGTCACTAGCCAGTTCCCACTTAGCCAGCAGGGCAGCATCAGCGCCGCCGCGCAGCACATCCATCGGGTGCCGTCGAACCTGACCACGCGCATCAAGCA > 1:707757/1‑137 CAGCAGGGCAAACCGCCTGCTTTCTGCCCCGAGGCACTGGTCACTAGCCAGTTCCCACTTAGCCAGCAGGGCAGCATCAGCGCCGCCGCGCAGCACATCCATCGGGTGCCGTCGAACCTGACCACGCGCATCAAGCA > 1:16515222/1‑137 CAGCAGGGCAAACCGCCTGCTTTCTGCCCCGAGGCACTGGTCACTAGCCAGTTCCCACTTAGCCAGCAGGGCAGCATCAGCGCCGCCGCGCAGCACATCCATCGGGTGCCGTCGAACCTGACCACGCGCATCAAGCA < 1:18379940/137‑1 GCAGGGCAAACCGCCTGCTTTCTGCCCCGAGGCACTGGTCACTAGCCAGTTCCCACTTAGCCAGCAGGGCAGCATCAGCGCCGCCGCGCAGCACATCCATCGGGTGCCGTCGAACCTGACCACGCGCATCAAGCAAC < 2:12212658/137‑1 AGGGCAAACCGCCTGCTTTCTGCCCCGAGGCACTGGTCACTAGCCAGTTCCCACTTAGCCAGCAGGGCAGCATCAGCGCCGCCGCTCAGCACATCCATCGGGTGCCGTCGAACCTGACCACGCGCATCAAGCAACTG > 2:2205426/1‑137 AGGGCAAACCGCCTGCTTTCTGCCCCGAGGCACTGGTCACTAGCCAGTTCCCACTTAGCCAGCAGGGCAGCATCAGCGCCGCCGCGCAGCACATCCATCGGGTGCCGTCGAACCTGACCACGCGCATCAAGCAACTG < 1:17220092/137‑1 AGGGCAAACCGCCTGCTTTCTGCCCCGAGGCACTGGTCACTAGCCAGTTCCCACTTAGCCAGCAGGGCAGCATCAGCGCCGCCGCGCAGCACATCCATCGGGTGCCGTCGAACCTGACCACGCGCATCAAGCAACTG < 1:3542581/137‑1 AGGGCAAACCGCCTGCTTTCTGCCCCGAGGCACTGGTCACTAGCCAGTTCCCACTTAGCCAGCAGGGCAGCATCAGCGCCGCCGCGCAGCACATCCATCGGGTGCCGTCGAACCTGACCACGCGCATCAAGCAACTG < 1:11219812/137‑1 AGGGCAAACCGCCTGCTTTCTGCCCCGAGGCACTGGTCACTAGCCAGTTCCCACTTAGCCAGCAGGGCAGCATCAGCGCCGCCGCGCAGCACATCCATCGGGTGCCGTCGAACCTGACCACGCGCATCAAGCAACTG < 1:8057474/137‑1 AGGGCAAACCGCCTGCTTTCTGCCCCGAGGCACTGGTCACTAGCCAGTTCCCACTTAGCCAGCAGGGCAGCATCAGCGCCGCCGCGCAGCACATCCATCGGGTGCCGTCGAACCTGACCACGCGCATCAAGCAACTG < 1:6371726/137‑1 GGCAAACCGCCTGCTTTCTGCCCCGAGGCACTGGTCACTAGCCAGTTCCCACTTAGCCAGCAGGGCAGCATCAGCGCCGCCGCGCAGCACATCCATCGGGTGCCGTCGAACCTGACCACGCGCATCAAGCAACTGGA > 2:1511553/1‑137 AAACCGCCTGCTTTCTGCCCCGAGGCACTGGTCACTAGCCAGTTCCCACTTAGCCAGCAGGGCAGCATCAGCGCCGCCGCGCAGCACATCCATCGGGTGCCGTCGAACCTGACCACGCGCATCAAGCAACTGGAGGA > 2:6415720/1‑137 AAACCGCCTGCTTTCTGCCCCGAGGCACTGGTCACTAGCCAGTTCCCACTTAGCCAGCAGGGCAGCATCAGCGCCGCCGCGCAGCACATCCATCGGGTGCCGTCGAACCTGACCACGCGCATCAAGCAACTGGAGGA < 1:12154687/137‑1 ACCGCCTGCTTTCTGCCCCGAGGCACTGGTCACTAGCCAGTTCCCACTTAGCCAGCAGGGCAGCATCAGCGCCGCCGCGCAGCACATCCATCGGGTGCCGTCGAACCTGACCACGCGCATCAAGCAACTGGAGGAGG < 1:15791799/137‑1 CCGCCTGCTTTCTGNCCCGAGGCACTGGTCACTAGCCAGTTCCCACTTAGCCAGCAGGGCAGCATCAGCGCCGCCGCGCAGCACATCCATCGGGTGCCGTCGAACCTGACCACGCGCATCAAGCAACTGGAGGAGGA < 1:5932959/137‑1 CCGCCTGCTTTCTGCCCCGAGGCACTGGTCACTAGCCAGTTCCCACTTAGCCAGCAGGGCAGCATCAGCGCCGCCGCGCAGCACATCCATCGGGTTCCGTCGAACCTGACCACGCGCATCAAGCAACTGGAGGAGGA < 2:3724786/137‑1 CCGCCTGCTTTCTGCCCCGAGGCACTGGTCACTAGCCAGTTCCCACTTAGCCAGCAGGGCAGCATCAGCGCCGCCGCGCAGCACATCCATCGGGTGCCGTCGAACCTGACCACGCGCATCAAGCAACTGGAGGAGGA < 1:12970337/137‑1 CCGCCTGCTTTCTGCCCCGAGGCACTGGTCACTAGCCAGTTCCCACTTAGCCAGCAGGGCAGCATCAGCGCCGCCGCGCAGCACATCCATCGGGTGCCGTCGAACCTGACCACGCGCATCAAGCAACTGGAGGAGGA < 1:2549785/137‑1 CCGCCTGCTTTCTGCCCCGAGGCACTGGTCACTAGCCAGTTCCCACTTAGCCAGCAGGGCAGCATCAGCGCCGCCGCGCAGCACATCCATCGGGTGCCGTCGAACCTGACCACGCGCATCAAGCAACTGGAGGAGGA < 2:7012082/137‑1 CCGCCTGCTTTCTGCCCCGAGGCACTGGTCACTAGCCAGTTCCCACTTAGCCAGCAGGGCAGCATCAGCGCCGCCGCGCAGCACATCCATCGGGTGCCGTCGAACCTGACCACGCGCATCAAGCAACTGGAGGAGGA < 1:17454780/137‑1 CCGCCTGCTTTCTGCCCCGAGGCACTGGTCACTAGCCAGTTCCCACTTAGCCAGCAGGGCAGCATCAGCGCCGCCGCGCAGCACATCCATCGGGTGCCGTCGAACCTGACCACGCGCATCAAGCAACTGGAGGAGGA < 1:6707565/137‑1 CCGCCTGCTTTCTGCCCCGAGGCACTGGTCACTAGCCAGTTCCCACTTAGCCAGCAGGGCAGCATCAGCGCCGCCGCGCAGCACATCCATCGGGTGCCGTCGAACCTGACCACGCGCATCAAGCAACTGGAGGAGGA < 1:13310954/137‑1 CCGCCTGCTTTCTGCCCCGAGGCACTGGTCACTAGCCAGTTCCCACTTAGCCAGCAGGGCAGCATCAGCGCCGCCGCGCAGCACATCCATCGGGTGCCGTCGAACCTGACCACGCGCATCAAGCAACTGGAGGAGGA < 2:10385241/137‑1 CCGCCTGCTTTCTGCCCCGAGGCACTGGTCACTAGCCAGTTCCCACTTAGCCAGCAGGGCAGCATCAGCGCCGCCGCGCAGCACATCCATCGGGTGCCGTCGAACCTGACCACGCGCATCAAGCAACTGGAGGAGGA < 1:8534750/137‑1 TGCTTTCTGCCCCGAGGCACTGGTCACTAGCCAGTTCCCACTTAGCCAGCAGGGCAGCATCAGCGCCGCCGCGCAGCACATCCATCGGGTGCCGTCGAACCTGACCACGCGCATCAAGCAACTGGAGGAGGACCTGG < 2:11102211/137‑1 TGCTTTCTGCCCCGAGGCACTGGTCACTAGCCAGTTCCCACTTAGCCAGCAGGGCAGCATCAGCGCCGCCGCGCAGCACATCCATCGGGTGCCGTCGAACCTGACCACGCGCATCAAGCAACTGGAGGAGGACCTGG < 1:17662852/137‑1 CTTTCTGCCCCGAGGCACTGGTCACTAGCCAGTTCCCACTTAGCCAGCAGGGCAGCATCAGCGCCGCCGCGCAGCACATCCATCGGGTGCCGTCGAACCTGACCACGCGCATCAAGCAACTGGAGGAGGACCTGGGT > 2:3063294/1‑137 CTTTCTGCCCCGAGGCACTGGTCACTAGCCAGTTCCCACTTAGCCAGCAGGGCAGCATCAGCGCCGCCGCGCAGCACATCCATCGGGTGCCGTCGAACCTGACCACGCGCATCAAGCAACTGGAGGAGGACCTGGGT > 2:18173075/1‑137 TTTCTGCCCCGAGGCACTGGTCACTAGCCAGTTCCCACTTAGCCAGCAGGGCAGCATCAGCGCCGCCGCGCAGCACATCCATCGGGTGCCGTCGAACCTGACCACGCGCATCAAGCAACTGGAGGAGGACCTGGGTG > 2:16233808/1‑137 TCTGCCCCGAGGCACTGGTCACTAGCCAGTTCCCACTTAGCCAGCAGGGCAGCATCAGCGCCGCCGCGCAGCACATCCATCGGGTGCCGTCGAACCTGACCACGCGCATCAAGCAACTGGAGGAGGACCTGGGTGTA < 1:14072119/137‑1 TGCCCCGAGGCACTGGTCACTAGCCAGTTCCCACTTAGCCAGCAGGGCAGCATCAGCGCCGCCGCGCAGCACATCCATCGGGTGCCGTCGAACCTGACCACGCGCATCAAGCAACTGGAGGAGGACCTGGGTGTAGA < 1:16830164/137‑1 CCCGAGGCACTGGTCACTAGCCAGTTCCCACTTAGCCAGCAGGGCAGCATCAGCGCCGCCGCGCAGCACATCCATCGGGTGCCGTCGAACCTGACCACGCGCATCAAGCAACTGGAGGAGGACCTGGGTGTAGAGCT < 2:12857189/137‑1 GCACTGGTCACTAGCCAGTTCCCACTTAGCCAGCAGGGCAGCATCAGCTCCGCCGCGCAGCACATCCATCGGGTGCCGTCGAACCTGACCACGCGCATCAAGCAACTGGAGGAGGACCTGGGTGTAGAGCTGTTCAT < 2:2353544/137‑1 CACTGGTCACTAGCCAGTTCCCACTTAGCCAGCAGGGCAGCATCAGCGCCGCCGCGCAGCACATCCATCGGGTGCCGTCGAACCTGACCACGCGCATCAAGCAACTGGAGGAGGACCTGGGTGTAGAGCTGTTCATT > 2:15892068/1‑137 GTCACTAGCCAGTTCCCACTTAGCCAGCAGGGCAGCATCAGCGCCGCCGCGCAGCACATCCATCGGGTGCCGTCGAACCTGACCACGCGCATCAAGCAACTGGAGGAGGACCTGGGTGTAGAGCTGTTCATTCGCGA > 1:522434/1‑137 GTCACTAGCCAGTTCCCACTTAGCCAGCAGGGCAGCATCAGCGCCGCCGCGCAGCACATCCATCGGGTGCCGTCGAACCTGACCACGCGCATCAAGCAACTGGAGGAGGACCTGGGTGTAGAGCTGTTCATTCGCGA > 1:3126186/1‑137 AGTTCCCACTTAGCCAGCAGGGCAGCATCAGCGCCGCCGCGCAGCACATCCATCGGGTGCCGTCGAACCTGACCACGCGCATCAAGCAACTGGAGGAGGACCTGGGTGTAGAGCTGTTCATTCGCGAGAAGAGCCGC < 2:7481363/137‑1 TCCCACTTAGCCAGCAGGGCAGCATCAGCGCCGCCGCGCAGCACATCCATCGGGTGCCGTCGAACCTGACCACGCGCATCAAGCAACTGGAGGAGGACCTGGGTGTAGAGCTGTTCATTCGCGAGAAGAGCCGCCTG > 1:10922122/1‑137 TCCCACTTAGCCAGCAGGGCAGCATCAGCGCCGCCGCGCAGCACATCCATCGAGTGCCGTCGAACCTGACCACGCGCATCAAGCAACTGGAGGAGGACCTGGGTGTAGAGCTATTCATTCGCGAGAAGAGCCGCATG > 2:13607823/1‑137 CCACTTAGCCAGCAGGGCAGCATCAGCGCCGCCGCGCAGCACATCCATCGGGTGCCGTCGAACCTGACCACGCGCATCAAGCAACTGGAGGAGGACCTGGGTGTAGAGCTGTTCATTCGCGAGAAGAGCCGCCTGCG > 2:1380948/1‑137 CCACTTAGCCAGCAGGGCAGCATCAGCGCCGCCGCGCAGCACATCCATCGGGTGCCGTCGAACCTGACCACGCGCATCAAGCAACTGGAGGAGGACCTGGGTGTAGAGCTGTTCATTCGCGAGAAGAGCCGCCTGCG > 2:7648168/1‑137 CCACTTAGCCAGCAGGGCAGCATCAGCGCCGCCGCGCAGCACATCCATCGGGTGCCGTCGAACCTGACCACGCGCATCAAGCAACTGGAGGAGGACCTGGGTGTAGAGCTGTTCATTCGCGAGAAGAGCCGCCTGCG > 2:609480/1‑137 CCACTTAGCCAGCAGGGCAGCATCAGCGCCGCCGCGCAGCACATCCATCGGGTGCCGTCGAACCTGACCACGCGCATCAAGCAACTGGAGGAGGACCTGGGTGTAGAGCTGTTCATTCGCGAGAAGAGCCGCCTGCG > 1:4306265/1‑137 CCACTTAGCCAGCAGGGCAGCATCAGCGCCGCCGCGCAGCACATCCATCGGGTGCCGTCGAACCTGACCACGCGCATCAAGCAACTGGAGGAGGACCTGGGTGTAGAGCTGTTCATTCGCGAGAAGAGCCGCCTGCG > 1:11605135/1‑137 CCACTTAGCCAGCAGGGCAGCATCAGCGCCGCCGCGCAGCACATCCATCGGGTGCCGTCGAACCTGACCACGCGCATCAAGCAACTGGAGGAGGACCTGGGTGTAGAGCTGTTCATTCGCGAGAAGAGCCGCCTGCG > 2:17784840/1‑137 CCACTTAGCCAGCAGGGCAGCATCAGCGCCGCCGCGCAGCACATCCATCGGGTGCCGTCGAACCTGACCACGCGCATCAAGCAACTGGAGGAGGACCTGGGTGTAGAGCTGTTCATTCGCGAGAAGAGCCGCCTGCG > 2:14479851/1‑137 CACTTAGCCAGCAGGGCAGCATCAGCGCCGCCGCGCAGCACATCCATCGGGTGCCGTCGAACCTGACCACGCGCATCAAGCAACTGGAGGAGGACCTGGGTGTAGAGCTGTTCATTCGCGAGAAGAGCCGCCTGCGC < 1:15143658/137‑1 CTTAGCCAGCAGGGCAGCATCAGCGCCGCCGCGCAGCACATCCATCGGGTGCCGTCGAACCTGACCACGCGCATCAAGCAACTGGAGGAGGACCTGGGTGTAGAGCTGTTCATTCGCGAGAAGAGCCGCCTGCGCCT > 1:9212843/1‑137 CCAGCAGGGCAGCATCAGCGCCGCCGCGCAGCACATCCATCGGGTGCCGTCGAACCTGACCACGCGCATCAAGCAACTGGAGGAGGACCTGGGTGTAGAGCTGTTCATTCGCGAGAAGAGCCGCCTGCGCCTGTCGC < 1:3692818/137‑1 CAGCAGGGCAGCATCAGCGCCGCCGCGCAGCACATCCATCGGGTGCCTTCGAACCTGACCACGCGCATCAAGCAACTGGAGGAGGACCTGGGTGTAGAGCTGTTCATTCGCGAGAAGAGCCGCCTGCGCCTGTCGCC > 2:2746732/1‑137 AGCAGGGCAGCATCAGCGCCGCCGCGCAGCACATCCATCGGGTGCCGTCGAACCTGACCACGCGCATCAAGCAACTGGAGGAGGACCTGGGTGTAGAGCTGTTCATTCGCGAGAAGAGCCGCCTGCGCCTGTCGCCT > 1:4597391/1‑137 AGCAGGGCAGCATCAGCGCCGCCGCGCAGCACATCCATCGGGTGCCGTCGAACCTGACCACGCGCATCAAGCAACTGGAGGAGGACCTGGGTGTAGAGCTGTTCATTCGCGAGAAGAGCCGCCTGCGCCTGTCGCCT > 1:15570117/1‑137 GCAGGGCAGCATCAGCGCCGCCGCGCAGCACATCCATCGGGTGCCGTCGAACCTGACCACGCGCATCAAGCAACTGGAGGAGGACCTGGGTGTAGAGCTGTTCATTCGCGAGAAGAGCCGCCTGCGCCTGTCGCCTG > 1:12549458/1‑137 GGCAGCATCAGCGCCGCCGCGCAGCACATCCATCGGGTGCCGTCGAACCTGACCACGCGCATCAAGCAACTGGAGGAGGACCTGGGTGTAGAGCTGTTCATTCGCGAGAAGAGCCGCCTGCGCCTGTCGCCTGCGGG > 1:2188131/1‑137 CGATCTGAGTCTGATCAACCTGGCCAATGGTCATCTGGTCGAGGATGTGAAGCTGGGCCTGGACCTTTGCCAGCAGGGCAAACCGCCTGCTTTCTGCCCCGAGGCACTGGTCACTAGCCAGTTCCCACTTAGCCAGCAGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451_phaM1/3556213‑3556354‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcagggcAGCATCAGCGCCGCCGCGCAGCACATCCATCGGGTGCCGTCGAACCTGACCACGCGCATCAAGCAACTGGAGGAGGACCTGGGTGTAGAGCTGTTCATTCGCGAGAAGAGCCGCCTGCGCCTGTCGCCTGCGGGTT > AE015451_phaM1/3571020‑3571155 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |