| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | AE015451_phaM1 | 3,760,510 | Δ22,673 bp | PP_3325 CDS (putative Outer membrane ferric siderophore receptor)–[nikD CDS (nickel ABC transporter ATP‑binding subunit)] | 22 genes PP_3325 CDS (putative Outer membrane ferric siderophore receptor), PP_3326 CDS (conserved exported protein of unknown function), PP_3328 CDS (putative Ring‑cleaving dioxygenase), PP_5599 CDS (putative transcriptional regulator_ LysR family), PP_3329 CDS (conserved membrane protein of unknown function), PP_5600 CDS (conserved protein of unknown function), PP_3330 CDS (putative Outer membrane ferric siderophore receptor), PP_3331 CDS (conserved membrane protein of unknown function), PP_3332 CDS (putative cytochrome c‑type protein), PP_3333 CDS (conserved protein of unknown function), PP_5743 CDS (putative TonB‑dependent receptor protein), PP_3335 CDS (conserved protein of unknown function), PP_3336 CDS (conserved protein of unknown function), PP_3337 CDS (conserved membrane protein of unknown function), PP_3338 CDS (putative cytochrome bd‑type quinol oxidase), PP_3339 CDS (conserved exported protein of unknown function), PP_3340 CDS (putative TonB‑dependent receptor), nikR CDS (nickel‑responsive regulator), nikA CDS (nickel ABC transporter periplasmic binding protein), nikB CDS (nickel ABC transporter permease subunit), nikC CDS (nickel ABC transporter permease subunit), [nikD CDS (nickel ABC transporter ATP‑binding subunit)] |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | AE015451_phaM1 | 3760510 | 3783182 | 22673 | 923 [0] | [0] 906 | PP_3325 CDS (putative Outer membrane ferric siderophore receptor)–[nikD CDS (nickel ABC transporter ATP‑binding subunit)] | PP_3325 CDS (putative Outer membrane ferric siderophore receptor),PP_3326 CDS (conserved exported protein of unknown function),PP_3328 CDS (putative Ring‑cleaving dioxygenase),PP_5599 CDS (putative transcriptional regulator_ LysR family),PP_3329 CDS (conserved membrane protein of unknown function),PP_5600 CDS (conserved protein of unknown function),PP_3330 CDS (putative Outer membrane ferric siderophore receptor),PP_3331 CDS (conserved membrane protein of unknown function),PP_3332 CDS (putative cytochrome c‑type protein),PP_3333 CDS (conserved protein of unknown function),PP_5743 CDS (putative TonB‑dependent receptor protein),PP_3335 CDS (conserved protein of unknown function),PP_3336 CDS (conserved protein of unknown function),PP_3337 CDS (conserved membrane protein of unknown function),PP_3338 CDS (putative cytochrome bd‑type quinol oxidase),PP_3339 CDS (conserved exported protein of unknown function),PP_3340 CDS (putative TonB‑dependent receptor),nikR CDS (nickel‑responsive regulator),nikA CDS (nickel ABC transporter periplasmic binding protein),nikB CDS (nickel ABC transporter permease subunit),nikC CDS (nickel ABC transporter permease subunit),[nikD CDS (nickel ABC transporter ATP‑binding subunit)] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451_phaM1 | = 3760509 | 0 (0.000) | 904 (1.060) | 134/270 | 0.1 | 100% | intergenic (+167/‑144) | folEB CDS (GTP cyclohydrolase I)/PP_3325 CDS (putative Outer membrane ferric siderophore receptor) | –/– |
| ? | AE015451_phaM1 | 3783183 = | 0 (0.000) | coding (274/771 nt) | nikD CDS (nickel ABC transporter ATP‑binding subunit) | ||||||
Only 100 of 904 total aligned reads displayed.
GCGCATCCCAACACATGAACATTTCCTCATCAGGATTCATTTGTCAGGTCTGACGCAAGGCGGGCCGCTCTACTCGCAAGGGTTTCTTGTCATCTGTGATGCAGCACGGCCCGAAGCAGGGCGCGGCATCGATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451_phaM1/3760376‑3760509‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AGCGCCTTCAACCCGGTGCGCAACATGGCCAGCCATGCCATCGAAACGCTCAGGCAACGAGGCATCACCAGCGCGGTAGCACGGGCGCGCATGGCCCACTGCCTGGATGCTGTCGGCTTGGCAGACACTGAGCGAG > AE015451_phaM1/3783183‑3783318 GCGCATCCCAACACATGAACATTTCCTCATCAGGATTCATTTGTCAGGTCTGACGCAAGGCGGGCCGCTCTACTCGCAAGGGTTTCTTGTCATCTGTGATGCAGCACGGCCCGAAGCAGGGCGCGGCATCGATGAGC > 2:18373354/1‑137GCGCATCCCAACACATGAACATTTCCTCATCAGGATTCATTTGTCAGGTCTGACGCAAGGCGGGCCGCTCTACTCGCAAGGGTTTCTTGTCATCTGTGATGCAGCACGGCCCGAAGCAGGGCGCGGCATCGATGAGC > 2:12943514/1‑137 CGCATCCCAACACATGAACATTTCCTCATCAGGATTCATTTGTCAGGTCTGACGCAAGGCGGGCCGCTCTACTCGCAAGGGTTTCTTGTCATCTGTGATGCAGCACGGCCCGAAGCAGGGCGCGGCATCGATGAGCG > 1:3795858/1‑137 GCATCCCAACACATGAACATTTCCTCATCAGGATTCATTTGTCAGGTCTGACGCAAGGCGGGCCGCTCTACTCGCAAGGGTTTCTTGTCATCTGTGATGCAGCACGGCCCGAAGCAGGGCGCGGCATCGATGAGCGC > 2:11682018/1‑137 CATCCCAACACATGAACATTTCCTCATCAGGATTCATTTGTCAGGTCTGACGCAAGGCGGGCCGCTCTACTCGCAAGGGTTTCTTGTCATCTGTGATGCAGCACGGCCCGAAGCAGGGCGCGGCATCGATGAGCGCC > 1:8676788/1‑137 CATCCCAACACATGAACATTTCCTCATCAGGATTCATTTGTCAGGTCTGACGCAAGGCGGGCCGCTCTACTCGCAAGGGTTTCTTGTCATCTGTGATGCAGCACGGCCCGAAGCAGGGCGCGGCATCGATGAGCGCC > 2:2998785/1‑137 CATCCCAACACATGAACATTTCCTCATCAGGATTCATTTGTCAGGTCTGACGCAAGGCGGGCCGCTCTACTCGCAAGGGTTTCTTGTCATCTGTGATGCAGCACGGCCCGAAGCAGGGCGCGGCATCGATGAGCGCC > 1:11376549/1‑137 CATCCCAACACATGAACATTTCCTCATCAGGATTCATTTGTCAGGTCTGACGCAAGGCGGGCCGCTCTACTCGCAAGGGTTTCTTGTCATCTGTGATGCAGCACGGCCCGAAGCAGGGCGCGGCATCGATGAGCGCC > 2:13674622/1‑137 CCAACACATGAACATTTCCTCATCAGGATTCATTTGTCAGGTCTGACGCAAGGCGGGCCGCTCTACTCGCAAGGGTTTCTTGTCATCTGTGATGCAGCACGGCCCGAAGCAGGGCGCGGCATCGATGAGCGCCTTCA < 1:12420152/137‑1 CCAACACATGAACATTTCCTCATCAGGATTCATTTGTCAGGTCTGACGCAAGGCGGGCCGCTCTACTCGCAAGGGTTTCTTGTCATCTGTGATGCAGCACGGCCCGAAGCAGGGCGCGGCATCGATGAGCGCCTTCA < 2:17425370/137‑1 CCAACACATGAACATTTCCTCATCAGGATTCATTTGTCAGGTCTGACGCAAGGCGGGCCGCTCTACTCGCAAGGGTTTCTTGTCATCTGTGATGCAGCACGGCCCGAAGCAGGGCGCGGCATCGATGAGCGCCTTCA < 1:7471036/137‑1 AACACATGAACATTTCCTCATCAGGATTCATTTGTCAGGTCTGACGCAAGGCGGGCCGCTCTACTCGCAAGGGTTTCTTGTCATCTGTGATGCAGCACGGCCCGAAGCAGGGCGCGGCATCGATGAGCGCCTTCAAC < 1:4144161/137‑1 ACATGAACATTTCCTCATCAGGATTCATTTGTCAGGTCTGACGCAAGGCGGGCCGCTCTACTCGCAAGGGTTTCTTGTCATCTGTGATGCAGCACGGCCCGAAGCAGGGCGCGGCATCGATGAGCGCCTTCAACCCG < 2:8695007/137‑1 AACATTTCCTCATCAGGATTCATTTGTCAGGTCTGACGCAAGGCGGGCCGCTCTACTCGCAAGGGTTTCTTGTCATCTGTGATGCAGCACGGCCCGAAGCAGGGCGCGGCATCGATGAGCGCCTTCAACCCGGTGCG > 2:609454/1‑137 CATTTCCTCATCAGGATTCATTTGTCAGGTCTGACGCAAGGCGGGCCGCTCTACTCGCAAGGGTTTCTTGTCATCTGTGATGCAGCACGGCCCGAAGCAGGGCGCGGCATCGATGAGCGCCTTCAACCCGGTGCGCA > 1:10002338/1‑137 CATTTCCTCATCAGGATTCATTTGTCAGGTCTGACGCAAGGCGGGCCGCTCTACTCGCAAGGGTTTCTTGTCATCTGTGATGCAGCACGGCCCGAAGCAGGGCGCGGCATCGATGAGCGCCTTCAACCCGGTGCGCA > 1:6814456/1‑137 CATTTCCTCATCAGGATTCATTTGTCAGGTCTGACGCAAGGCGGGCCGCTCTACTCGCAAGGGTTTCTTGTCATCTGTGATGCAGCACGGCCCGAAGCAGGGCGCGGCATCGATGAGCGCCTTCAACCCGGTGCGCA > 1:16596998/1‑137 CATTTCCTCATCAGGATTCATTTGTCAGGTCTGACGCAAGGCGGGCCGCTCTACTCGCAAGGGTTTCTTGTCATCTGTGATGCAGCACGGCCCGAAGCAGGGCGCGGCATCGATGAGCGCCTTCAACCCGGTGCGCA > 1:15190633/1‑137 CATTTCCTCATCAGGATTCATTTGTCAGGTCTGACGCAAGGCGGGCCGCTCTACTCGCAAGGGTTTCTTGTCATCTGTGATGCAGCACGGCCCGAAGCAGGGCGCGGCATCGATGAGCGCCTTCAACCCGGTGCGCA > 2:9391060/1‑137 CATTTCCTCATCAGGATTCATTTGTCAGGTCTGACGCAAGGCGGGCCGCTCTACTCGCAAGGGTTTCTTGTCATCTGTGATGCAGCACGGCCCGAAGCAGGGCGCGGCATCGATGAGCGCCTTCAACCCGGTGCGCA > 1:12615415/1‑137 CATTTCCTCATCAGGATTCATTTGTCAGGTCTGACGCAAGGCGGGCCGCTCTACTCGCAAGGGTTTCTTGTCATCTGTGATGCAGCACGGCCCGAAGCAGGGCGCGGCATCGATGAGCGCCTTCAACCCGGTGCGCA > 1:13946085/1‑137 CATTTCCTCATCAGGATTCATTTGTCAGGTCTGACGCAAGGCGGGCCGCTCTACTCGCAAGGGTTTCTTGTCATCTGTGATGCAGCACGGCCCGAAGCAGGGCGCGGCATCGATGAGCGCCTTCAACCCGGTGCGCA > 2:7457940/1‑137 CATTTCCTCATCAGGATTCATTTGTCAGGTCTGACGCAAGGCGGGCCGCTCTACTCGCAAGGGTTTCTTGTCATCTGTGATGCAGCACGGCCCGAAGCAGGGCGCGGCATCGATGAGCGCCTTCAACCCGGTGCGCA > 1:13171233/1‑137 TTCCTCATCAGGATTCATTTGTCAGGTCTGACGCAAGGCGGGCCGCTCTACTCGCAAGGGTTTCTTGTCATCTGTGATGCAGCACGGCCCGAAGCAGGGCGCGGCATCGATGAGCGCCTTCAACCCGGTGCGCAACA < 2:767947/137‑1 CTCATCAGGATTCATTTGTCAGGTCTGACGCAAGGCGGGCCGCTCTACTCGCAAGGGTTTCTTGTCATCTGTGATGCAGCACGGCCCGAAGCAGGGCGCGGCATCGATGAGCGCCTTCAACCCGGTGCGCAACATGG > 1:17985969/1‑137 TCATCAGGATTCATTTGTCAGGTCTGACGCAAGGCGGGCCGCTCTACTCGCAAGGGTTTCTTGTCATCTGTGATGCAGCACGGCCCGAAGCAGGGCGCGGCATCGATGAGCGCCTTCAACCCGGTGCGCAACATGGC < 1:7683813/137‑1 TCAGGATTCATTTGTCAGGTCTGACGCAAGGCGGGCCGCTCTACTCGCAAGGGTTTCTTGTCATCTGTGATGCAGCACGGCCCGAAGCAGGGCGCGGCATCGATGAGCGCCTTCAACCCGGTGCGCAACATGGCCAG < 2:14139795/137‑1 TCAGGATTCATTTGTCAGGTCTGACGCAAGGCGGGCCGCTCTACTCGCAAGGGTTTCTTGTCATCTGTGATGCAGCACGGCCCGAAGCAGGGCGCGGCATCGATGAGCGCCTTCAACCCGGTGCGCAACATGGCCAG < 1:2564159/137‑1 CAGGATTCATTTGTCAGGTCTGACGCAAGGCGGGCCGCTCTACTCGCAAGGGTTTCTTGTCATCTGTGATGCAGCACGGCCCGAAGCAGGGCGCGGCATCGATGAGCGCCTTCAACCCGGTGCGCAACATGGCCAGC > 2:4539556/1‑137 CAGGATTCATTTGTCAGGTCTGACGCAAGGCGGGCCGCTCTACTCGCAAGGGTTTCTTGTCATCTGTGATGCAGCACGGCCCGAAGCAGGGCGCGGCATCGATGAGCGCCTTCAACCCGGTGCGCAACATGGCCAGC > 1:11574222/1‑137 CAGGATTCATTTGTCAGGTCTGACGCAAGGCGGGCCGCTCTACTCGCAAGGGTTTCTTGTCATCTGTGATGCAGCACGGCCCGAAGCAGGGCGCGGCATCGATGAGCGCCTTCAACCCGGTGCGCAACATGGCCAGC > 1:6035362/1‑137 AGGATTCATTTGTCAGGTCTGACGCAAGGCGGGCCGCTCTACTCGCAAGGGTTTCTTGTCATCTGTGATGCAGCACGGCCCGAAGCAGGGCGCGGCATCGATGAGCGCCTTCAACCCGGTGCGCAACATGGCCAGCC > 1:4469066/1‑137 GATTCATTTGTCAGGTCTGACGCAAGGCGGGCCGCTCTACTCGCAAGGGTTTCTTGTCATCTGTGATGCAGCACGGCCCGAAGCAGGGCGCGGCATCGATGAGCGCCTTCAACCCGGTGCGCAACATGGCCAGCCAT > 1:1968893/1‑137 TCATTTGTCAGGTCTGACGCAAGGCGGGCCGCTCTACTCGCAAGGGTTTCTTGTCATCTGTGATGCAGCACGGCCCGAAGCAGGGCGCGGCATCGATGAGCGCCTTCAACCCGGTGCGCAACATGGCCAGCCATGCC > 2:15375636/1‑137 ATTTGTCAGGTCTGACGCAAGGCGGGCCGCTCTACTCGCAAGGGTTTCTTGTCATCTGTGATGCAGCACGGCCCGAAGCAGGGCGCGGCATCGATGAGCGCCTTCAACCCGGTGCGCAACATGGCCAGCCATGCCAT < 1:11142488/137‑1 TTGTCGGGTCTGACGCAAGGCGGGCCGCTCTACTCGCAAGGGTTTCTTGTCATCTGTGATGCAGCACGGCCCGAAGCAGGGCGCGGCATCGATGAGCGCCTTCAACCCGGTGCGCAACATGGCCAGCCAGGCCATCG < 2:15663041/137‑1 TGTCAGGTCTGACGCAAGGCGGGCCGCTCTACTCGCAAGGGTTTCTTGTCATCTGTGATGCAGCACGGCCCGAAGCAGGGCGCGGCATCGATGAGCGCCTTCAACCCGGTGCGCAACATGGCCAGCCATGCCATCGA > 1:9603112/1‑137 CAGGTCTGACGCAAGGCGGGCCGCTCTACTCGCAAGGGTTTCTTGTCATCTGTGATGCAGCACGGCCCGAAGCAGGGCGCGGCATCGATGAGCGCCTTCAACCCGGTGCGCAACATGGCCAGCCATGCCATCGAAAC < 1:4718072/137‑1 GGTCTGACGCAAGGCGGGCCGCTCTACTCGCAAGGGTTTCTTGTCATCTGTGATGCAGCACGGCCCGAAGCAGGGCGCGGCATCGATGAGCGCCTTCAACCCGGTGCGCAACATGGCCAGCCATGCCATCGAAACGC < 1:18634255/137‑1 CTGACGCAAGGCGGGCCGCTCTACTCGCAAGGGTTTCTTGTCATCTGTGATGCAGCACGGCCCGAAGCAGGGCGCGGCATCGATGAGCGCCTTCAACCCGGTGCGCAACATGGCCAGCCATGCCATCGAAACGCTCA < 1:14405528/137‑1 ACGCAAGGCGGGCCGCTCTACTCGCAAGGGTTTCTTGTCATCTGTGATGCAGCACGGCCCGAAGCAGGGCGCGGCATCGATGAGCGCCTTCAACCCGGTGCGCAACATGGCCAGCCATGCCATCGAAACGCTCAGGC < 1:5255160/137‑1 ACGCAAGGCGGGCCGCTCTACTCGCAAGGGTTTCTTGTCATCTGTGATGCAGCACGGCCCGAAGCAGGGCGCGGCATCGATGAGCGCCTTCAACCCGGTGCGCAACATGGCCAGCCATGCCATCGAAACGCTCAGGC < 2:12456336/137‑1 ACGCAAGGCGGGCCGCTCTACTCGCAAGGGTTTCTTGTCATCTGTGATGCAGCACGGCCCGAAGCAGGGCGCGGCATCGATGAGCGCCTTCAACCCGGTGCGCAACATGGCCAGCCATGCCATCGAAACGCTCAGGC < 1:843962/137‑1 CAAGGCGGGCCGCTCTACTCGCAAGGGTTTCTTGTCATCTGTGATGCAGCACGGCCCGAAGCAGGGCGCGGCATCGATGAGCGCCTTCAACCCGGTGCGCAACATGGCCAGCCATGCCATCGAAACGCTCAGGCAAC > 1:14860535/1‑137 CAAGGCGGGCCGCTCTACTCGCAAGGGTTTCTTGTCATCTGTGATGCAGCACGGCCCGAAGCAGGGCGCGGCATCGATGAGCGCCTTCAACCCGGTGCGCAACATGGCCAGCCATGCCATCGAAACGCTCAGGCAAC > 2:10218492/1‑137 AGGCGGGCCGCTCTACTCGCAAGGGTTTCTTGTCATCTGTGATGCAGCACGGCCCGAAGCAGGGCGCGGCATCGATGAGCGCCTTCAACCCGGTGCGCAACATGGCCAGCCATGCCATCGAAACGCTCAGGCAACGA < 2:15805226/137‑1 GCGGGCCGCTCTACTCGCAAGGGTTTCTTGTCATCTGTGATGCAGCACGGCCCGAAGCAGGGCGCGGCATCGATGAGCGCCTTCAACCCGGTGCGCAACATGGCCAGCCATGCCATCGAAACGCTCAGGCAACGAGG < 1:9796508/137‑1 CGGGCCGCTCTACTCGCAAGGGTTTCTTGTCATCTGTGATGCAGCACGGCCCGAAGCAGGGCGCGGCATCGATGAGCGCCTTCAACCCGGTGCGCAACATGGCCAGCCATGCCATCGAAACGCTCAGGCAACGAGGC > 2:5548150/1‑137 CGGGCCGCTCTACTCGCAAGGGTTTCTTGTCATCTGTGATGCAGCACGGCCCGAAGCAGGGCGCGGCATCGATGAGCGCCTTCAACCCGGTGCGCAACATGGCCAGCCATGCCATCGAAACGCTCAGGCAACGAGGC > 1:16130564/1‑137 GGGCCGCTCTACTCGCCAGGGTTTCTTGTCATCTGTGATGCAGCACGGCCCGAAGCAGGGCGCGGCATCGATGAGCGCCTTCAACCCGGTGCGCAACATGGCCAGCCATGCCATCGAAACGCTAAGGCAACGAGGCA > 2:3989497/1‑137 GGGCCGCTCTACTCGCAAGGGTTTCTTGTCATCTGTGATGCAGCACGGCCCGAAGCAGGGCGCGGCATCGATGAGCGCCTTCAACCCGGTGCGCAACATGGCCAGCCATGCCATCGAAACGCTCAGGCAACGAGGCA > 2:11092373/1‑137 GGGCCGCTCTACTCGCAAGGGTTTCTTGTCATCTGTGATGCAGCACGGCCCGAAGCAGGGCGCGGCATCGATGAGCGCCTTCAACCCGGTGCGCAACATGGCCAGCCATGCCATCGAAACGCTCAGGCAACGAGGCA > 1:7188589/1‑137 GGCCGCTCTACTCGCAAGGGTTTCTTGTCATCTGTGATGCAGCACGGCCCGAAGCAGGGCGCGGCATCGATGAGCGCCTTCAACCCGGTGCGCAACATGGCCAGCCATGCCATCGAAACGCTCAGGCAACGAGGCAT < 2:4966820/137‑1 GGCCGCTCTACTCGCAAGGGTTTCTTGTCATCTGTGATGCAGCACGGCCCGAAGCAGGGCGCGGCATCGATGAGCGCCTTCAACCCGGTGCGCAACATGGCCAGCCATGCCATCGAAACGCTCAGGCAACGAGGCAT < 1:10512412/137‑1 GCTCTACTCGCAAGGGTTTCTTGTCATCTGTGATGCAGCACGGCCCGAAGCAGGGCGCGGCATCGATGAGCGCCTTCAACCCGGTGCGCAACATGGCCAGCCATGCCATCGAAACGCTCAGGCAACGAGGCATCACC > 2:2375289/1‑137 GCAAGGGTTTCTTGTCATCTGTGATGCAGCACGGCCCGAAGCAGGGCGCGGCATCGATGAGCGCCTTCAACCCGGTGCGCAACATGGCCAGCCATGCCATCGAAACGCTCAGGCAACGAGGCATCACCAGCGCGGTA < 1:10872499/137‑1 GCAAGGGTTTCTTGTCATCTGTGATGCAGCACGGCCCGAAGCAGGGCGCGGCATCGATGAGCGCCTTCAACCCGGTGCGCAACATGGCCAGCCATGCCATCGAAACGCTCAGGCAACGAGGCATCACCAGCGCGGTA < 1:17437752/137‑1 GCAAGGGTTTCTTGTCATCTGTGATGCAGCACGGCCCGAAGCAGGGCGCGGCATCGATGAGCGCCTTCAACCCGGTGCGCAACATGGCCAGCCATGCCATCGAAACGCTCAGGCAACGAGGCATCACCAGCGCGGTA < 2:3746598/137‑1 GCAAGGGTTTCTTGTCATCTGTGATGCAGCACGGCCCGAAGCAGGGCGCGGCATCGATGAGCGCCTTCAACCCGGTGCGCAACATGGCCAGCCATGCCATCGAAACGCTCAGGCAACGAGGCATCACCAGCGCGGTA < 2:14544253/137‑1 AGGGTTTCTTGTCATCTGTGATGCAGCACGGCCCGAAGCAGGGCGCGGCATCGATGAGCGCCTTCAACCCGGTGCGCAACATGGCCAGCCATGCCATCGAAACGCTCAGGCAACGAGGCATCACCAGCGCGGTAGCA > 1:3634295/1‑137 GGGTTTCTTGTCATCTGTGATGCAGCACGGCCCGAAGCAGGGCGCGGCATCGATGAGCGCCTTCAACCCGGTGCGCAACATGGCCAGCCATGCCATCGAAACGCTCAGGCAACGAGGCATCACCAGCGCGGTAGCAC < 2:8406572/137‑1 GGGTTTCTTGTCATCTGTGATGCAGCACGGCCCGAAGCAGGGCGCGGCATCGATGAGCGCCTTCAACCCGGTGCGCAACATGGCCAGCCATGCCATCGAAACGCTCAGGCAACGAGGCATCACCAGCGCGGTAGCAC < 1:2184208/137‑1 GTTTCTTGTCATCTGTGATGCAGCACGGCCCGAAGCAGGGCGCGGCATCGATGAGCGCCTTCAACCCGGTGCGCAACATGGCCAGCCATGCCATCGAAACGCTCAGGCAACGAGGCATCACCAGCGCGGTAGCACGG > 2:2091905/1‑137 TTCTTGTCATCTGTGATGCAGCACGGCCCGCAGCAGGGCGCGGCATCGATGAGCGCCTTCAACCCGGTGCGCAACATGGCCAGCCATGCCATCGAAGCGCTCAGGCAACGAGGCATCACCAGCGCGGTAGCACGGGC > 2:18020347/1‑137 CTTGTCATCTGTGATGCAGCACGGCCCGAAGCAGGGCGCGGCATCGATGAGCGCCTTCAACCCGGTGCGCAACATGGCCAGCCATGCCATCGAAACGCTCAGGCAACGAGGCATCACCAGCGCGGTAGCACGGGCGC > 1:11863685/1‑137 CTTGTCATCTGTGATGCAGCACGGCCCGAAGCAGGGCGCGGCATCGATGAGCGCCTTCAACCCGGTGCGCAACATGGCCAGCCATGCCATCGAAACGCTCAGGCAACGAGGCATCACCAGCGCGGTAGCACGGGCGC > 1:8866493/1‑137 CTTGTCATCTGTGATGCAGCACGGCCCGAAGCAGGGCGCGGCATCGATGAGCGCCTTCAACCCGGTGCGCAACATGGCCAGCCATGCCATCGAAACGCTCAGGCAACGAGGCATCACCAGCGCGGTAGCACGGGCGC < 1:2998785/137‑1 CTTGTCATCTGTGATGCAGCACGGCCCGAAGCAGGGCGCGGCATCGATGAGCGCCTTCAACCCGGTGCGCAACATGGCCAGCCATGCCATCGAAACGCTCAGGCAACGAGGCATCACCAGCGCGGTAGCACGGGCGC > 2:6571138/1‑137 CTTGTCATCTGTGATGCAGCACGGCCCGAAGCAGGGCGCGGCATCGATGAGCGCCTTCAACCCGGTGCGCAACATGGCCAGCCATGCCATCGAAACGCTCAGGCAACGAGGCATCACCAGCGCGGTAGCACGGGCGC < 1:17005648/137‑1 TTGTCATCTGTGATGCAGCACGGCCCGAAGCAGGGCGCGGCATCGATGAGCGCCTTCAACCCGGTGCGCAACATGGCCAGCCATGCCATCGAAACGCTCAGGCAACGAGGCATCACCAGCGCGGTAGCACGGGCGCG > 1:2805862/1‑137 TTGTCATCTGTGATGCAGCACGGCCCGAAGCAGGGCGCGGCATCGATGAGCGCCTTCAACCCGGTGCGCAACATGGCCAGCCATGCCATCGAAACGCTCAGGCAACGAGGCATCACCAGCGCGGTAGCACGGGCGCG < 1:17649131/137‑1 TGTCATCTGTGATGCAGCACGGCCCGAAGCAGGGCGCGGCATCGATGAGCGCCTTCAACCCGGTGCGCAACATGGCCAGCCATGCCATCGAAACGCTCAGGCAACGAGGCATCACCAGCGCGGTAGCACGGGCGCGC > 1:6168498/1‑137 GTCATCTGTGATGCAGCACGGCCCGAAGCAGGGCGCGGCATCGATGAGCGCCTTCAACCCGGTGCGCAACATGGCCAGCCATGCCATCGAAACGCTCAGGCAACGAGGCATCACCAGCGCGGTAGCACGGGCGCGCA > 2:10704043/1‑137 TCTGTGATGCAGCACGGCCCGAAGCAGGGCGCGGCATCGATGAGCGCCTTCAACCCGGTGCGCAACATGGCCAGCCATGCCATCGAAACGCTCAGGCAACGAGGCATCACCAGCGCGGTAGCACGGGCGCGCATGGC < 2:9207262/137‑1 TCTGTGATGCAGCACGGCCCGAAGCAGGGCGCGGCATCGATGAGCGCCTTCAACCCGGTGCGCAACATGGCCAGCCATGCCATCGAAACGCTCAGGCAACGAGGCATCACCAGCGCGGTAGCACGGGCGCGCATGGC < 1:12958178/137‑1 TCTGTGATGCAGCACGGCCCGAAGCAGGGCGCGGCATCGATGAGCGCCTTCAACCCGGTGCGCAACATGGCCAGCCATGCCATCGAAACGCTCAGGCAACGAGGCATCACCAGCGCGGTAGCACGGGCGCGCATGGC < 1:16853424/137‑1 CTGTGATGCAGCACGGCCCGAAGCAGGGCGCGGCACCGATGAGCGTCTTCAACCCGGTGTGCAACGTGGCAAGCCATGCCATCGAAACGCTCAGGCAACGAGGCATCACCAGCGCGATAGCACGGGCGCGCATGGac > 2:2499342/1‑135 GATGCAGCACGGCCCGAAGCAGGGCGCGGCATCGATGAGCGCCTTCAACCCGGTGCGCAACATGGCCAGCCATGCCATCGAAACGCTCAGGCAACGAGGCATCACCAGCGCGGTAGCACGGGCGCGCATGGCCCACT > 1:8129949/1‑137 tgcggtACGGCCGGAAGGAGGGTGCGACATCGATGAGCGCCTTCAACACGGTGCGCAACATGGCCGGCCGTGCCATCGAAACGCTCAGGCAACGAGGCATCACCAGCGCGGCAGCACGGGCGTGCATGGAACACTGC > 2:16699352/7‑137 CAGCACGGCCCGAAGCAGGGCGCGGCATCGATGAGCGCCTTCAACCCGGTGCGCAACATGGCCAGCCATGCCATCGAAACGCTCAGGCAACGAGGCATCACCAGCGCGGTAGCACGGGCGCGCATGGCCCACTGCCT < 1:12086637/137‑1 AGCACGGCCCGAAGCAGGGCGCGGCATCGATGAGCGCCTTCAACCCGGTGCGCAACATGGCCAGCCATGCCATCGAAACGCTCAGGCACCGAGGCATCACCAGAGAGGTAGCACGGACGCGCATGGCCCACTGACTG > 2:18931995/1‑137 CACGGCCCGAAGCAGGGCGCGGCATCGATGAGCGCCTTCAACCCGGTGCGCAACATGGCCAGCCATGCCATCGAAACGCTCAGGCAACGAGGCATCACCAGCGCGGTAGCACGGGCGCGCATGGCCCACTGCCTGGA > 2:5398943/1‑137 GGCCCGAAGCAGGGCGCGGCATCGATGAGCGCCTTCAACCCGGTGCGCAACATGGCCAGCCATGCCATCGAAACGCTCAGGCAACGAGGCATCACCAGCGCGGTAGCACGGGCGCGCATGGCCCACTGCCTGGATGC < 1:5451190/137‑1 GGCCCGAAGCAGGGCGCGGCATCGATGAGCGCCTTCAACCCGGTGCGCAACATGGCCAGCCATGCCATCGAAACGCTCAGGCAACGAGGCATCACCAGCGCGGTAGCACGGGCGCGCATGGCCCACTGCCTGGATGC > 2:8928491/1‑137 GGCCCGAAGCAGGGCGCGGCATCGATGAGCGCCTTCAACCCGGTGCGCAACATGGCCAGCCATGCCATCGAAACGCTCAGGCAACGAGGCATCACCAGCGCGGTAGCACGGGCGCGCATGGCCCACTGCCTGGATGC > 2:16184686/1‑137 CCCGAAGCAGGGCGCGGCATCGATGAGCGCCTTCAACCCGGTGCGCAACATGGCCAGCCATGCCATCGAAACGCTCAGGCAACGAGGCATCACCAGCGCGGTAGCACGGGCGCGCATGGCCCACTGCCTGGATGCTG > 1:15538128/1‑137 CGAAGCAGGGCGCGGCATCGATGAGCGCCTTCAACCCGGTGCGCAACATGGCCAGCCATGCCATCGAAACGCTCAGGCAACGAGGCATCACCAGCGCGGTAGCACGGGCGCGCATGGCCCACTGCCTGGATGCTGTC < 2:6775517/137‑1 CGAAGCAGGGCGCGGCATCGATGAGCGCCTTCAACCCGGTGCGCAACATGGCCAGCCATGCCATCGAAACGCTCAGGCAACGAGGCATCACCAGCGCGGTAGCACGGGCGCGCATGGCCCACTGCCTGGATGCTGTC < 1:18174663/137‑1 GAAGCAGGGCGCGGCATCGATGAGCGCCTTCAACCCGGTGCGCAACATGGCCAGCCATGCCATCGAAACGCTCAGGCAACGAGGCATCACCAGCGCGGTAGCACGGGCGCGCATGGCCCACTGCCTGGATGCTGTCG > 1:6501974/1‑137 GAAGCAGGGCGCGGCATCGATGAGCGCCTTCAACCCGGTGCGCAACATGGCCAGCCATGCCATCGAAACGCTCAGGCAACGAGGCATCACCAGCGCGGTAGCACGGGCGCGCATGGCCCACTGCCTGGATGCTGTCG > 1:3236008/1‑137 GCAGGGCGCGGCATCGATGAGCGCCTTCAACCCGGTGCGCAACATGGCCAGCCATGCCATCGAAACGCTCAGGCAACGAGGCATCACCAGCGCGGTAGCACGGGCGCGCATGGCCCACTGCCTGGATGCTGTCGGCT < 2:12087585/137‑1 AGGGCGCGGCATCGATGAGCGCCTTCAACCCGGTGCGCAACATGGCCAGCCATGCCATCGAAACGCTCAGGCAACGAGGCATCACCAGCGCGGTAGCACGGGCGCGCATGGCCCACTGCCTGGATGCTGTCGGCTTG < 2:11376549/137‑1 AGGGCGCGGCATCGATGAGCGCCTTCAACCCGGTGCGCAACATGGCCAGCCATGCCATCGAAACGCTCAGGCAACGAGGCATCACCAGCGCGGTAGCACGGGCGCGCATGGCCCACTGCCTGGATGCTGTCGGCTTG < 2:15046877/137‑1 GGCGCGGCATCGATGAGCGCCTTCAACCCGGTGCGCAACATGGCCAGCCATGCCATCGAAACGCTCAGGCAACGAGGCATCACCAGCGCGGTAGCACGGGCGCGCATGGCCCACTGCCTGGATGCTGTCGGCTTGGC < 1:5700972/137‑1 GCGGCATCGATGAGCGCCTTCAACCCGGTGCGCAACATGGCCAGCCATGCCATCGAAACGCTCAGGCAACGAGGCATCACCAGCGCGGTAGCACGGGCGCGCATGGCCCACTGCCTGGATGCTGTCGGCTTGGCAGA > 2:16950621/1‑137 GCGGCATCGATGAGCGCCTTCAACCCGGTGCGCAACATGGCCAGCCATGCCATCGAAACGCTCAGGCAACGAGGCATCACCAGCGCGGTAGCACGGGCGCGCATGGCCCACTGCCTGGATGCTGTCGGCTTGGCAGA > 2:712438/1‑137 GCGGCATCGATGAGCGCCTTCAACCCGGTGCGCAACATGGCCAGCCATGCCATCGAAACGCTCAGGCAACGAGGCATCACCAGCGCGGTAGCACGGGCGCGCATGGCCCACTGCCTGGATGCTGTCGGCTTGGCAGA > 2:7907772/1‑137 GCGGCATCGATGAGCGCCTTCAACCCGGTGCGCAACATGGCCAGCCATGCCATCGAAACGCTCAGGCAACGAGGCATCACCAGCGCGGTAGCACGGGCGCGCATGGCCCACTGCCTGGATGCTGTCGGCTTGGCAGA > 1:9252903/1‑137 TCGATGAGCGCCTTCAACCCGGTGCGCAACATGGCCAGCCATGCCATCGAAACGCTCAGGCAACGAGGCATCACCAGCGCGGTAGCACGGGCGCGCATGGCCCACTGCCTGGATGCTGTCGGCTTGGCAGACACTGA < 2:1319734/137‑1 GATGAGCGCCTTCAACCCGGTGCGCAACATGGCCAGCCATGCCATCGAAACGCTCAGGCAACGAGGCATCACCAGCGCGGTAGCACGGGCGCGCATGGCCCACTGCCTGGATGCTGTCGGCTTGGCAGACACTGAGC < 2:5658149/137‑1 GCGCATCCCAACACATGAACATTTCCTCATCAGGATTCATTTGTCAGGTCTGACGCAAGGCGGGCCGCTCTACTCGCAAGGGTTTCTTGTCATCTGTGATGCAGCACGGCCCGAAGCAGGGCGCGGCATCGATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451_phaM1/3760376‑3760509‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AGCGCCTTCAACCCGGTGCGCAACATGGCCAGCCATGCCATCGAAACGCTCAGGCAACGAGGCATCACCAGCGCGGTAGCACGGGCGCGCATGGCCCACTGCCTGGATGCTGTCGGCTTGGCAGACACTGAGCGAG > AE015451_phaM1/3783183‑3783318 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |