mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Predicted mutations | |||||
|---|---|---|---|---|---|
| evidence | position | mutation | annotation | gene | description |
| RA | 70,867 | T→C | D92G (GAC→GGC) | araA ← | L‑arabinose isomerase |
| RA | 2,705,602 | G→A | intergenic (+64/‑27) | ygaH → / → emrR | L‑valine transporter subunit YgaH/multidrug efflux transporter EmrAB transcriptional repressor EmrR |
| RA | 2,847,052 | A→G | V10A (GTT→GCT) | recD ← | exodeoxyribonuclease V subunit alpha |
| MC JC | 3,023,945 | Δ777 bp | ECB_RS14920–[ECB_RS14925] | ECB_RS14920, ECB_RS14920, [ECB_RS14925] | |
| Unassigned missing coverage evidence | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_012967 | 3741259–3741968 | 3745004 | 3037–3746 | 160 [150] | [1] 590 | [ECB_RS18445]–[waaG] | [ECB_RS18445],ECB_RS18445,ECB_RS18450,waaO,rfaP,[waaG] |
| Unassigned new junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_012967 | = 3741964 | NA (NA) | 523 (1.200) | 140/184 | 0.2 | 99.8% | intergenic (‑54/+3) | ECB_RS18445/ECB_RS18450 | IS1‑like element IS1A family transposase/glycosyltransferase |
| ? | NC_012967 | 3745005 = | 1 (0.000) | coding (423/1125 nt) | waaG | glycosyltransferase family 4 protein | |||||