Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	AE015451	1156204	1156282	79	4 [2]	[2] 8	PP_1013	Sensor histidine kinase

ATACCCGGGCAAGCCGCTGGCGTTGCGTCGCTGCATCGGCAACCTGATCGACAACGCCATCAAGTACGGCGAACGGGCGCGGCTGCGCATCATCGACGGGGCAGAGGGTTTTGTGCTGCAGGTGGATGACCAGGGGCCCGGGGTGCCGCAGCAGCAGCTGGAACAGGTGTTCGAGCCGCATTTCCGGCTGGCCGGGCAGCAGCAGGGGTATGGGCTGGGGTTGGGCATTGCGCGCAACATCGCCCATAGCCATGGGGGCGAGGTGAGCTTGCTG  >  AE015451/1155967‑1156240                                                                                                                                                                                                                                             |                                      aTACCCGGGCAAGCCGCTGGCGTTGCGTCGCTGCATCGGCAACCTGATCGACAACGCCATCAAGTACGGCGAACGGGCGCGGCTGCGCATCATCGACGGGGCAGAGGGTTTTGTGCTGCAGGTGGATGACCAGGGGCCCGGGGTGCCGCAGCAGCAGCTGGAACAGGTGTTCGAGCCGCATTTCCGGCTGGCCGGGCAGCAGCAGGGGTATGGGCTGGGGTTGGGCATTGCGCGCaa                                       <  1:170468/237‑1 (MQ=255)                                                  gACAACGCCATCAAGTACGGCGAACGGGCGCGGCTGCGCATCATCGACGGGGCAGAGGGTTTTGTGCTGCAGGTGGATGACCAGGGGCCCGGGGAGCCGCAGCAGCAGCTGGAACAGGTGTTCGAGCCGCATTTCCGGCTGGCCGGGCAGCAGCAGGGGTATGGGCTGGGGTTGGGCATTGCGCGCAACATCGCCCATAGCCATGGGGGCGAGGTGAGCGTGCTg  >  1:118072/1‑225 (MQ=255)                                                                                 ggCTGCGCATCATGGACGGGGCAGAGGGTTTTGTGCTGCAGGTGGATGACCAGGGGCCCGGGGTGCCGCAGCAGCAGCTGGAACAGGTGTTCGAGCCGCATTTCCGGCTGGCCGGGCAGCAGCAGGGGTATGGGCTGGGGTTGGGCATTGCGCGCaa                                       <  2:301379/157‑1 (MQ=255)                                                                                                                                                                         gtTCGAGCCGCATTTCCGGCTGGCCGGGCAGCAGCAGGGGTATGGGCTGGGGTTGGGCATTGCGCGCAACATCGCCCATAGCCATGGGGGCGAGGt            <  2:118071/96‑1 (MQ=255)                                                                                                                                                                                                                                             |                                      ATACCCGGGCAAGCCGCTGGCGTTGCGTCGCTGCATCGGCAACCTGATCGACAACGCCATCAAGTACGGCGAACGGGCGCGGCTGCGCATCATCGACGGGGCAGAGGGTTTTGTGCTGCAGGTGGATGACCAGGGGCCCGGGGTGCCGCAGCAGCAGCTGGAACAGGTGTTCGAGCCGCATTTCCGGCTGGCCGGGCAGCAGCAGGGGTATGGGCTGGGGTTGGGCATTGCGCGCAACATCGCCCATAGCCATGGGGGCGAGGTGAGCTTGCTG  >  AE015451/1155967‑1156240

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑