Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	AE015451	1156204	1156282	79	4 [2]	[2] 8	PP_1013	Sensor histidine kinase

GACCCTGTATCTGCCGCGGGGTATGGATTGAGTTTTTGGGGTGCCTGTGCGGGCTTCTTCGCGGGTGAACCCGCTCCTACAACGACCGAGTCAGGTTTGCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGCACCCAAAATGTCACTGCCCGGTGACAATCCCGTCGTCCTTCGTGACATCCGCCATGACCCCGCTGGCTAGAATTCGCAAACGACTGGCAAGGATCAAGCTGGCCCATGACC  >  AE015451/1156267‑1156518                 |                                                                                                                                                                                                                                            gACCCTGTATCTGCCGCGGGGTATGGATTGAGTTTTTGGGGCGCCTGTGCGGGCTTCTTCGCGGGCGAACCCGCTCCTACAACGACCGAGTCAGGTTTGCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGCACCCa                                                                                                            >  1:3246/1‑146 (MQ=255)                gcgGGGTATGGATTGAGTTTTTGGGGTGCCTGTGCGGGCTTCTTCGCGGGTGAACCCGCTCCTACAACGACCGAGTCAGGTTTGCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGCACCCAAAATGTCACTGCCCGGTGACAATCCCGTCGTCCTTCGTGACATCCGCCATGACCCCGCTGGCTAGAATTCGCAAACGACTGGCAAGGATCAAGCTGGCCCATGAcc  >  1:368655/1‑237 (MQ=255)                 cgGGGTATGGATTGAGTTTTTGGGGTGCCTGTGCGGGCTTCTTCGCGGGTGa                                                                                                                                                                                          <  1:141086/52‑1 (MQ=255)                 cgGGGTATGGATTGAGTTTTTGGGGTGCCTGTGCGGGCTTCTTCGCGGGTGa                                                                                                                                                                                          >  1:227084/1‑52 (MQ=255)                 cgGGGTATGGATTGAGTTTTTGGGGTGCCTGTGCGGGCTTCTTCGCGGGTGa                                                                                                                                                                                          <  2:227083/52‑1 (MQ=255)                 cgGGGTATGGATTGAGTTTTTGGGGTGCCTGTGCGGGCTTCTTCGCGGGTGAACCCGCTCCTACAACGACCg                                                                                                                                                                      <  1:231483/72‑1 (MQ=255)                 cgGGGTATGGATTGAGTTTTTGGGGTGCCTGTGCGGGCTTCTTCGCGGGTGAACCCGCTCCTACAACGACCg                                                                                                                                                                      >  2:231482/1‑72 (MQ=255)                 cgGGGTATGGATTGAGTTTTTGGGGTGCCTGTGCGGGCTTCTTCGCGGGTGAACCCGCTCCTACAACGACCGAGTCAGGTTTGCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGCACCCAAAATGTCACTGCCCGGTGACAATCCCGTCGTCCTTCGTGACATCCGCCATGACCCCGCTGGCTAGAATTCGCAAACGACTGGCAAGGATCAAGCggg           >  1:295845/1‑227 (MQ=255)                 |                                                                                                                                                                                                                                            GACCCTGTATCTGCCGCGGGGTATGGATTGAGTTTTTGGGGTGCCTGTGCGGGCTTCTTCGCGGGTGAACCCGCTCCTACAACGACCGAGTCAGGTTTGCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGCACCCAAAATGTCACTGCCCGGTGACAATCCCGTCGTCCTTCGTGACATCCGCCATGACCCCGCTGGCTAGAATTCGCAAACGACTGGCAAGGATCAAGCTGGCCCATGACC  >  AE015451/1156267‑1156518

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑