New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	729633 =	48 (0.960)	3 (0.060)	3/318	NT	7.1%	coding (163/741 nt)	yfiH	Uncharacterized protein YfiH
	?	AE015451	729840 =	33 (0.700)					coding (370/741 nt)	yfiH	Uncharacterized protein YfiH

GGCATCCGCCACCACCCGCCCATGCACCTGCTTGAGCCAGGCCGGTTGGATGGTGAACTGTTCGCTCAGGCGGCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/729710‑729633 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcggcggcgCATGCTGGCTGGCGTGGGCTGGCGGGTGGCGTGCTGGAAGCCACGCTGGACCGGCTGGCGCTGCCGCCAGAAGAGGTGCTGGTGTGGTTGGGGCCTGCCATCGGCCCGCAAGCATTCGAAGTGGGGCTGGAAGTGCGTGATGCCTTTACCGCCGTGCACCCGCAAGCAGCTCGGGCATTCGTCGACGGCGAACGGCCAGGCAAGCTGTTGGCGGATATCTATGAGCT  >  AE015451/729840‑730066                                                                                                                                                                                                                                                                                                                   GGCATCCGCCACCACCCGCCCATGCACCTGCTTGAGCCAGGCCGGTTGGATGGTGAACTGTTCGCTCAGGCGGCGGCGCATGCTGGCTGGCGTGGGCTGGCGGGTGGCGTGCTGGAAGCCACGCTGGACCGGCTGGCGCTGC                                                                                                                                                                     <  1:456741/142‑1 GGCATCCGCCACCACCCGCCCATGCACCTGCTTGAGCCAGGCCGGTTGGATGGTGAACTGTTCGCTCAGGCGGCGGCGCATGCTGGCTGGCGTGGGCTGGCGGGTGGCGTGCTGGAAGCCACGCTGGACCGGCTGGCGCTGC                                                                                                                                                                     >  2:456738/1‑142                  GCCCATGCACCTGCTTGAGCCAGGCCGGTTGGATGGTGAACTGTTCGCTCAGGCGGCGGCGCATGCTGGCTGGCGTGGGCTGGCGGGgg                                                                                                                                                                                                         >  2:186661/1‑87                                                                 gcgcGGCGGCGGCGCATGCTGGCTGGCGTGGGGTGGCGGGTGGCGTGCTGGAAGCCACGCTGGACCGGCTGGCGCTGCCGCCAGAAGAGGTGCTGGTGT                                                                                                                                                <  1:688250/95‑1                                                                  TCAGGCGGCGGCGCATGCTGGCTGGCGTGGGCTGGCGGGTGGCGTGCTGGAAGCCACGCTGGACCGGCTGGCGCTGCCGCCAGAAGAGGTGCTGGTGTGGTTGGGGCCTGCCATCGGCCCGCAAGCATTCGAAGTGGGGCTGGAAGTGCGTGATGCCTTTACCGCCGTGCACCCGCAAGCAGCTCGGGCATTCGTCGACGGCGAACGGCCAGGCAAGCTGTTGGCGGg              >  1:74369/1‑227                                                                    tgggGGCGGCGCATGGTGGCTGGCGTGGGCTGGCGGGTGGCGTGCTGGAGGCCACGCTGGACCGGCTGGCGCTGCCGCCAGAAGAGGTGCTGGTGTGGTTGGGGCCTGCCATCGGCCCGCAAGCATTCGAAGTGGGGCTGGAAGTGCGTGA                                                                                         <  2:300608/147‑1                                                                      GCGGCGGCGCATGCTGGCTGGCGTGGGCTGGCGGGTGGCGTGCTGGAAGCCACGCTGGACCGGCTGGCGCTGCCGCCAGAAGAGGTGCTGGTGTGGTTGGGGCCTGCCATCGGCCCGCAAGCATTCGAAGTGGGGCTGGAAGTGCGTGATGCCTTTACCGCCGTGCACCCGCAAGCAGCTCGGGCATTCGTCGACGGCGAACGGCCAGGCAAGCTGTTGGCGGATATCTATGAGCT  <  1:361692/236‑1                                                                      GCGGCGGCGCATGCTGGCTGGCGTGGGCTGGCGGGTGGCGTGCTGGAAGCCACGCTGGACCGGCTGGCGCTGCCGCCAGAAGAGGTGCTGGTGTGGTTGGGGCCTGCCATCGGCCCGCAAGCATTCGAAGTGGGGCTGGAAGTGCGTGATGCCTTTACCGCCGTGCACCCGCAAGCAGCTCGGGCATTCGTCGACGGCGAACGGCCAGGCAAGCTGTTGGCG                >  1:665641/1‑222                                                                      GCGGCGGCGCATGCTGGCTGGCGTGGGCTGGCGGGTGGCGTGCTGGAAGCCACGCTGGACCGGCTGGCGCTGCCGCCAGAAGAGGTGCTGGTGTGGTTGGGGCCTGCCATCGGCCCGCAAGCATTCGAAGTGGGGCTGGAAGTGCGTGATGCCTTTACCGCCGTGCACCCGCAAGCAGCTCGGGCATTCGTCGACGGCGAACGGCCAGGCAAGCTGTTGGCG                <  2:665638/222‑1                                                                       CGGCGGCGCATGCTGGCTGGCGTGGGCTGGCGGGTGGCGTGCTGGAAGCCACGCTGGACCGGCTGGCGCTGCCGCCAGAAGAGGTGCTGGTGTGGTTGGGGCCTGCCATCGGCCCGCAAGCATTCGATGTGGGGCTGGAAGTGCGTGATGCCTTTACCGCCGTGCACCCGCAAGCAGCTCGGGCAT                                                   >  2:534291/1‑186                                                                            GCGCATGCTGGCTGGCGTGGGCTGGCGGGTGGCGTGCTGGAAGCCACGCTGGACCGGCTGGCGCTGCCGCCAGGAGAGGTGCTGGTGTGGTTGGGGCCTGCCATCGGCCCGCAAGCATTCGAAGTGGGGCTGGAAGTGCGTGATGCCTTTACCGCCG                                                                           >  2:599626/1‑157                                                                                                                                                                                                                                                                                                                   GGCATCCGCCACCACCCGCCCATGCACCTGCTTGAGCCAGGCCGGTTGGATGGTGAACTGTTCGCTCAGGCGGCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/729710‑729633 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcggcggcgCATGCTGGCTGGCGTGGGCTGGCGGGTGGCGTGCTGGAAGCCACGCTGGACCGGCTGGCGCTGCCGCCAGAAGAGGTGCTGGTGTGGTTGGGGCCTGCCATCGGCCCGCAAGCATTCGAAGTGGGGCTGGAAGTGCGTGATGCCTTTACCGCCGTGCACCCGCAAGCAGCTCGGGCATTCGTCGACGGCGAACGGCCAGGCAAGCTGTTGGCGGATATCTATGAGCT  >  AE015451/729840‑730066

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.