| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451 | = 1739440 | 90 (1.800) | 3 (0.070) | 3/310 | NT | 3.6% | intergenic (‑25/+9) | PP_1533/PP_1534 | putative Excisionase/conserved protein of unknown function |
| ? | AE015451 | = 1739426 | 78 (1.700) | intergenic (‑11/+23) | PP_1533/PP_1534 | putative Excisionase/conserved protein of unknown function | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TCGCAATTCGATTAACAAGGGGACTGCCCACTGGAACGCGGGGCAGCGGCTCTGGCTCCCGGTAGCAGGCATCGGCCTCAACATAGTAGCTGCGACCGTGCTTTACCGGGGCCGGGGTGATCAGGCCCTCACGGGCCCAACGGCGAAGAGTGTTGCTGCTGGGCGGCGTTCTGAAGTGATCGTGCGCCCATTCGTCGAGGGTGACTTTGCACATGATGGTCTCCACGCCGCCGGCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/1739202‑1739440‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccgccggcggcgTGGAGACCATCATGTGCAAAGTCACCCTCGACGAATGGGCGCACGATCACTTCAGAACGCCGCCCAGCAGCAACACTCTTCGCCGTTGGGCCCGTGAGGGCCTGATCACCCCGGCCCCGGTAAAGCACGGTCGCAGCTACTATGTTGAGGCCGATGCCTGCTACCGGGAGCCAGAGCCGCTGCCCCGCGTTCCAGTGGGCAG < AE015451/1739426‑1739225 TCGCAATTCGATTAACAAGGGGACTGCCCACTGGAACGCGGGGCAGCGGCTCTGGCTCCCGGTAGCAGGCATCGGCCTCAACATAGTAGCTGCGACCGTGCTTTACCGGGGCCGGGGTGATCAGGCCCTCACGGGCCCAACGGCGAAGAGTGTTGCTGCTGGGCGGCGTTCTGAAGTGATCGTGCGCCCATTCGTCGAGGGTGACTTTGCACATGATGGTCTCCACGCCG > 2:458942/1‑230 GCGACCGTGCTTTACCGGGGCCGGGGTGATCAGGCCCTCACGGGCCCAACGGCGAAGAGTGTTGCTGCTGGGCGGCGTTCTGAAGTGATCGTGCGCCCATTCGTCGAGGGTGACTTTGCACATGATGGTCTCCACGCCGC < 1:84011/140‑1 GCGACCGTGCTTTACCGGGGCCGGGGTGATCAGGCCCTCACGGGCCCAACGGCGAAGAGTGTTGCTGCTGGGCGGCGTTCTGAAGTGATCGTGCGCCCATTCGTCGAGGGTGACTTTGCACATGATGGTCTCCACGCCGC > 2:84011/1‑140 ACCGTGCTTTACCGGGGCCGGGGTGATCAGGCCCTCACGGGCCCAACGGCGAAGAGTGTTGCTGCTGGGCGGCGTTCTGAAGTGATCGTGCGCCCATTCGTCGAGGGTGACTTTGCACATGATGGTCTCCACGCCGCCGGCGGCGTGG > 1:815490/1‑148 GGCGCCGTTCTGAAGTGATCGTGCGCCCATTCGTCGGGGGTGACTTTGCACATGATGGTCTCCACGCCGCCGGC > 2:884520/1‑74 GTGCGCCCATTCGTCGAGGGTGACTTTGCACATGATGCTCTCCACGCCGCCGGCGGCGTGGAGACCATCATGTGCAAAGTCACCCTCGACGAATGGGCGCACGATCACTTCAGAACGCCGCCCAGCA > 1:351962/1‑127 CCCATTCGTCGAGGGTGACTTTGCACATGATGGTCTCCACGCCGCCGGCGGCGTGGAGACCATCATGTGCAAAGTCACCCTCGACGAATGGGCGCACGATCACTTCAGCACGCCGCCCAGCAGCAACACTCTTCGCCGTT > 2:764608/1‑140 TTCGTCGAGGGTGACTTTGCACATGATGGTCTCCACGCCGCCGGCGGCGTGGAGACCATCATGTGCAAAGTCACCCTCGACGAATGGGCGCACGATCACTTCAGAACGCCGCCCAGCAGCAACACTC < 2:351959/127‑1 CCACGCCGCCGGCGGCGTGGAGACCATCATGTGCAAAGTCACCCTCGACGAATGGGCGCACGATCACTTCAGAACGCCGCCCAGCAGCAACACTCTTCGCCGTTGGGCCCGTGAGGGCCTGATCACCCCGGCCCCGGTAAAGCACGGT > 2:815487/1‑148 CGGCGGCGTGGAGACCATCATGTGCAAAGTCACCCTCGACGAATGGGCGCACGATCACTTCAGAACGCCGCCCAGCAGCAACACTCTTCGCCGTTGGGCCCGTGAGGGCCTGATCAGCCCGGACCCGGTAAAGCACGGTCGCAGCTACTATGTTGAGGCCGATGCCTGCTACCGGGAGCCAGAGCCGCTGCCCCGCGTTCCAGTGGGCAG > 1:509797/1‑210 TCGCAATTCGATTAACAAGGGGACTGCCCACTGGAACGCGGGGCAGCGGCTCTGGCTCCCGGTAGCAGGCATCGGCCTCAACATAGTAGCTGCGACCGTGCTTTACCGGGGCCGGGGTGATCAGGCCCTCACGGGCCCAACGGCGAAGAGTGTTGCTGCTGGGCGGCGTTCTGAAGTGATCGTGCGCCCATTCGTCGAGGGTGACTTTGCACATGATGGTCTCCACGCCGCCGGCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/1739202‑1739440‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccgccggcggcgTGGAGACCATCATGTGCAAAGTCACCCTCGACGAATGGGCGCACGATCACTTCAGAACGCCGCCCAGCAGCAACACTCTTCGCCGTTGGGCCCGTGAGGGCCTGATCACCCCGGCCCCGGTAAAGCACGGTCGCAGCTACTATGTTGAGGCCGATGCCTGCTACCGGGAGCCAGAGCCGCTGCCCCGCGTTCCAGTGGGCAG < AE015451/1739426‑1739225 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |