New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 1902261	38 (0.760)	4 (0.080)	4/320	NT	9.6%	coding (2812/4026 nt)	PP_1703	assimilatory nitrate reductase/sulfite reductase
	?	AE015451	= 1902441	39 (0.820)					coding (2992/4026 nt)	PP_1703	assimilatory nitrate reductase/sulfite reductase

CCCAAGCCAGCTGCAGGGTGCTGCCAGTGTGGTGTTGATCGCCAGCACCTTTGGCGATGGCGACGCGCCCGACAGCGGCGCGGCCTTCTGGCAGGCTTTGCAGGGCGAGGAGGGCGCTCACTGCGCCGGGCTGCCCTATGCCGTACTGGCCCTGGGCGACTCCAGTTACGACCAGTTCTGCGGTTTTGGCCGCAAGCTCGACCAGCGCCTGGCCGAGCTGGGAGGGCATCGCCTGCTGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/1902020‑1902261 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgctggcgcCGGGGCCATTGAGCAGGCGGTTTTCCAGTACGGTGGCCATCCAGGGTTGCTGCTTGCTGAAGGCCGATACGGGTGCAGGTTCACTCGCCGGAGATGGCGCCGCGGCAGTGCCCAGTGCAGGCAATAACGCTTCGAGCCAGCCAGCAAAGGCTTCGTCGAAGTCGGGCTCGCAGTCCACCCGCGCCAGCAGGCGATGCCCTCCCAGCTCGGCCAGGCGCTGGTCG  <  AE015451/1902441‑1902218                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CCCAAGCCAGCTGCAGGGTGCTGCCAGTGTGGTGTTGATCGCCAGCACCTTTGGCGATGGCGACGCGCCCGACAGCGGCGCGGCCTTCTGGCAGGCTTTGCAGGGCGAGGAGGGCGCTCACTGCGCCGGGCTGCCCTATGCCGTACTGGCCCTGGGCGACTCCAGTTACGACCAGTTCTGCGGTTTTGGCCGCAAGCTCGACCAGCGCCTGGCCGAGCTGGGAGGGCATCGCCTGC                                                                                                                                                                                                                                        <  1:314783/236‑1                                                                 GCGCCCGACAGCGGCGCGGCCTTCTGGCAGGCTTTGCAGGGCGAGGAGGGCGCTCACTGCGCCGGGCTGCCCTATGCCGTACTGGCCCTGGGCGACTCCAGTTACGACCAGTTCTGCGGTTTTGGCCGCAAGCTCGACCAGCGCCTGGCCGAGCTGGGAGGGCATCGCCTGCTGGCGCCGGGGCCATTGAGCAGGCGGTTTTCCAGTACGGTGGCCATCCAGGGTTGCTGCTTGC                                                                                                                                                                         <  1:885097/235‑1                                                                    CCCGACGGCGGCGCGGCCTTCTGGCAGGCTTTGCAGGGCGAGGAGGGCGCTCACTGCGCCGGGCTGCCCTATGCCGTACTGGCCCTGGGCGACTCCAGTTACGACCAGTTCTGCGGTTTTGGCCGCAAGCTCGACCAGCGCCTGGCCGAGCTGGGAGGGCATCGCCTGCTGGCGCCGGGGCCATTGAGCAGGCGGTTTT                                                                                                                                                                                                          <  2:233716/199‑1                                                                                                                                                                                             GCCGCAAGCTCGACCAGCGCCTGGCCGAGCTGGGAGGGCATCGCCTGCTGGCGCCGGGGCCATTGAGCAGGCGGTTTTCCAGTACGG                                                                                                                                                                                                 <  1:403555/87‑1                                                                                                                                                                                             GCCGCAAGCTCGACCAGCGCCTGGCCGAGCTGGGAGGGCATCGCCTGCTGGCGCCGGGGCCATTGAGCAGGCGGTTTTCCAGTACGG                                                                                                                                                                                                 >  2:403552/1‑87                                                                                                                                                                                                                                            CTGGCGCCGGGGCCATTGAGCAGGCGGTTTTCCAGTACGGTGGCCATCCAGGGTTGCTGCTTGCTGAAGGCCGATACGGGTGCAGGTTCACTCGCCGGAGATGGCGCCGCGGCAGTGCCCAGTGCAGGCAATAACGCTTCGAGCCAGCCAGCAAAGGCTTCGTCGAAGTCGGGCTCGCAGTCCACCCGCGCCAGCAGGCGATGCCCTCCCAGCTCGGCCAGGCGCTGGTCG  >  2:655066/1‑231                                                                                                                                                                                                                                            CTGGCGCCGGGGCCATTGAGCAGGCGGTTTTCCAGTACGGTGGCCATCCAGGGGTGCTGCTTGCTGAAGG                                                                                                                                                                   >  2:84416/1‑70                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CCCAAGCCAGCTGCAGGGTGCTGCCAGTGTGGTGTTGATCGCCAGCACCTTTGGCGATGGCGACGCGCCCGACAGCGGCGCGGCCTTCTGGCAGGCTTTGCAGGGCGAGGAGGGCGCTCACTGCGCCGGGCTGCCCTATGCCGTACTGGCCCTGGGCGACTCCAGTTACGACCAGTTCTGCGGTTTTGGCCGCAAGCTCGACCAGCGCCTGGCCGAGCTGGGAGGGCATCGCCTGCTGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/1902020‑1902261 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgctggcgcCGGGGCCATTGAGCAGGCGGTTTTCCAGTACGGTGGCCATCCAGGGTTGCTGCTTGCTGAAGGCCGATACGGGTGCAGGTTCACTCGCCGGAGATGGCGCCGCGGCAGTGCCCAGTGCAGGCAATAACGCTTCGAGCCAGCCAGCAAAGGCTTCGTCGAAGTCGGGCTCGCAGTCCACCCGCGCCAGCAGGCGATGCCCTCCCAGCTCGGCCAGGCGCTGGTCG  <  AE015451/1902441‑1902218

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.