| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451 | 1964719 = | 59 (1.180) | 6 (0.130) | 6/320 | NT | 8.8% | coding (931/2526 nt) | yegE | diguanylate cyclase with phosphodiesterase domain |
| ? | AE015451 | 1964805 = | 68 (1.430) | coding (1017/2526 nt) | yegE | diguanylate cyclase with phosphodiesterase domain | |||||
GTGCAGCACCAGTACGATGCCACTGACCTGGCCATCATTGAGGATCGGCGAGCCTACCAGGTTGATCGACACGGTACTGCCGTCCAGGCGCTGGATCAGCCGGGCATGCTCGGAGCCGCCCTTGAGGCTGCCGCTGAGCACCTGCTCGACCAAGCTGCGACCATCCTCCTCGGCGTGCTCATCCACCAGGCTGAACAGTGCCGACAGCGGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/1964931‑1964719‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcggcagCCTCAAGGGCGGCTCCGAGCATGCCCGGCTGATCCAGCGCCTGGACGGCAGTACCGTGTCGATCAACCTGGTAGGCTCGCCGATCCTCAATGATGGCCAGGTCAGTGGCATCGTACTGGTGCTGCACGACATGACCCAGGAACGCCAGTACATCGCCAACCTGTCCTGGCAAGCAACCCACGATGCGCTGACCGGGCTGGCCAACCGCCGCGAGTTCGAATACCGCCTGG > AE015451/1964805‑1965034 GTGCAGCACCAGTACGATGCCACTGACCTGGCCATCATTGAGGATCGGCGAGCCTACCAGGTTGATCGACACGGTACTGCCGTCCAGGCGCTGGATCAGCCGGGCATGCTCGGAGCCGCCCTTGAGGCTGCCGCTGAGCACCTGCTCGACCAAGCTGCGACCATCCTCCTCGGCGTGCTCATCCACCAGGCTGAACAGTGCCGAC > 2:802959/1‑205 AGCACCAGTACGATGCCACTGACCTGGCCATCATTGAGGATCGGCGAGCCTACCAGGTTGATCGACACGGTACTGCCGTCCAGGCGCTGGATCAGCCGGGCATGCTCGGAGCCGCCCTTGAGGCTGCCGCTGAGCACCTGCTCGACCAAGCTGCGACCATCCTCCTCGGCGTGCTCATCCACCAGGCTGAACAGTGCCGACAG > 1:706012/1‑203 CTGACCTGGCCATCATTGAGGATCGGCGAGCCTACCAGGTTGATCGACACGGTACTGCCGTCCAGGCGCTGGATCAGCCGGGCATGCTCGGAGCCGCCCTTGAGGCTGCCGCTGAGCACCTGCTCGACCAAGCTGCGACCATCCTCCTCGGCGTGCTCATCCACCAGGCTGAACAGTGCCGAC > 2:484233/1‑183 GCGAGCCTACCAGGTTGATCGACACGGTACTGCCGTCCAGGCGCTGGATCAGCCGGGCATGCTCGGAGCCGCCCTTGAGGCTGCCGCTGAGCACCTGCTCGACCAAGCTGCGACCATCCTCCTCGGCGTGCTCATCCACCAGGCTGAACAGTGCCGACAGCG < 2:676197/162‑1 gCGGTCCTGCCGTCCAGGCGCGGGATCAGCCGGGCATGCTCGGAGCCGCCCTTGAGGCTGCCGCTGAGCACCTGCTCGACCAAGCTGCGACCATCCTCCTCGGCGTGCTCATCCACCAGGCTGAACAGTGCCGACAGCGGCAGCCTCAAGGGCGGCTCCGAGCATGCCCGGCTGATCCAGCGC < 1:172558/182‑1 AGGCGCTGGATCAGCCGGGCATGCTCGGAGCCGCCCTTGAGGCTGCCGCTGAGCACCTGCTCGACCAAGCTGCGACCATCCTCCTCGGCGTGCTCATCCACCAGGCTGAACAGTGCCGACAGCGGCAGCCTCAA < 1:643092/134‑1 AGGCGCTGGATCAGCCGGGCATGCTCGGAGCCGCCCTTGAGGCTGCCGCTGAGCACCTGCTCGACCAAGCTGCGACCATCCTCCTCGGCGTGCTCATCCACCAGGCTGAACAGTGCCGACAGCGGCAGCCTCAA > 2:643089/1‑134 GCGCTGGATCAGCCGGGCATGCTCGGAGCCGCCCTTGAGGCTGCCGCTGAGCACCTGCTCGACCAAGCTGCGACCATCCTCCTCGGCGTGCTCATCCACCAGGCTGAACAGTGCCGACAGC > 1:719695/1‑121 GCGCTGGATCAGCCGGGCATGCTCGGAGCCGCCCTTGAGGCTGCCGCTGAGCACCTGCTCGACCAAGCTGCGACCATCCTCCTCGGCGTGCTCATCCACCAGGCTGAACAGTGCCGACAGC < 2:719692/121‑1 CTCGACCAAGCTGCGACCATCCTCCTCGGCGTGCTCATCCACCAGGCTGAACAGTGCCGACAGCGGCAGCCTCAAGGGCGGCTCCGAGCATGCCCGGCTGATCCAGCGCCTGGACGGCAGTACCGTGTCGATCAACCTGGTAGGCTCGCCGATCCTCAATGATGGCCAGGTCAGTGGCATCGTACTGGTGCTGCACGACATGACCC > 1:721879/1‑206 CTCGACCAAGCTGCGACCATCCTCCTCGGCGTGCTCATCCACCAGGCTGAACAGTGCCGACAGCGGCAGCCTCAAGGGCGGCTCCGAGCATGCCCGGCTGATCCAGCGCCTGGACGGCAGTACCGTGTCGATCAACCTGGTAGGCTCGCCGATCCTCAATGATGGCCAGGTCAGTGGCATCGTACTGGTGCTGCACGACATGACCC < 2:721876/206‑1 CATCCTCCTCGGCGTGCTCGTCCACCAGGCTGACCAGTGCCGACAGCGGCAGCCTCAGGGGCGGCTCCGAGCATGCCCGGCTGATCCAGCGCCTGGA < 2:586933/97‑1 gccGCCTCAAGGTCGGCTCCGAGCATGCCCGGCTGATCCGGCGCCTGGACGGCAGTACCGTGTCGATCAACCTGGTAGGCTCGCCGATCCTCAATGATGGCCAGGTCAGTGGCATCGTACTG < 2:393665/119‑1 CAGCCTCAAGGGCGGCTCCGAGCATGCCCGGCTGATCGAGCGCCTGGACGGCAGTACCGTGTCGATCAACCTGGTAGGCTCGCCGATCCTCAATGATGGCCAGGTCAGTGGCATCGTACTGGTGCTGCACGACATGACCCAGGAACGCCAGTACATCGCCAACCTGTCCTGGCAAGCAACCCACGATGCGCTGACCGGGCTGGCCAACCG > 2:882491/1‑210 CAGCCTCAAGGGCGGCTCCGAGCATGCCCGGCTGATCCAGCGCCTGGACGGCAGTACCGTGTCGATCAACCTGGTAGGCTCGCCGATCCTCAATGATGGCCAGGTCAGTGGCATCGTACTGGTGCTGCACGACATGACCCAGGAACGCCAGTACATCGCCAACCTGTCCTGGCAAGCAACCCACGATGCGCTGACCGGGCTGGCCAACCG < 1:882494/210‑1 GCCTCAAGGGCGGCTCCGAGCATGCCCGGCTGATCCAGCGCCTGGACGGCAGTACCGTGTCGATCAACCTGGTAGGCTCGCCGATCCTCAATGATGGCCAGGTCAGTGGCATCGTACTGGTGCTGCACGACATGACCCAGGAACGCCAGTACATCGCCAACCTGTCCTGGCAAGCAACCCACGATGCGCTGACCGGGCTGGCCAACCGCCGCGAGTTCGAATACCGCCTGG > 1:717146/1‑231 GTGCAGCACCAGTACGATGCCACTGACCTGGCCATCATTGAGGATCGGCGAGCCTACCAGGTTGATCGACACGGTACTGCCGTCCAGGCGCTGGATCAGCCGGGCATGCTCGGAGCCGCCCTTGAGGCTGCCGCTGAGCACCTGCTCGACCAAGCTGCGACCATCCTCCTCGGCGTGCTCATCCACCAGGCTGAACAGTGCCGACAGCGGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/1964931‑1964719‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcggcagCCTCAAGGGCGGCTCCGAGCATGCCCGGCTGATCCAGCGCCTGGACGGCAGTACCGTGTCGATCAACCTGGTAGGCTCGCCGATCCTCAATGATGGCCAGGTCAGTGGCATCGTACTGGTGCTGCACGACATGACCCAGGAACGCCAGTACATCGCCAACCTGTCCTGGCAAGCAACCCACGATGCGCTGACCGGGCTGGCCAACCGCCGCGAGTTCGAATACCGCCTGG > AE015451/1964805‑1965034 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |