New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 2457184	50 (1.000)	3 (0.060)	3/312	NT	5.2%	coding (255/999 nt)	PP_2150	putative Thiamine biosynthesis lipoprotein
	?	AE015451	= 2457331	64 (1.390)					coding (402/999 nt)	PP_2150	putative Thiamine biosynthesis lipoprotein

CGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGACCATGGGCAGCAGCTACAGCATCCAGTACGTCCGCGAGCCTGGTGGCCCGCTGCCGGCCCAGGTGCAGATGGCGGTGGAAACCATCCTGCACGACATCGACCACCACTACTCGACCTACCGCGGCGATTCCATCGTAAGCCAGTTCAACCGCTTGCCTGCGGGCCAGTGCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/2456968‑2457184 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggccagtgcctgTGGTTCGGGCACTTGCTCGTGACGGGCCTGAGGGCCGAAGCCCCACAAGTCGAGCAATGGCTCTACGGTGAGATCGAAAGCGCCATCGCTCTGCTCGGCAAGGTGCTGACCCAGGCTGACCAACGCGAGCATGTCAGGCGGCAGAGCCAGGCACTGGCCCGCAGGCAAGCGGTTGAACTGGCTTACGATGGAATCGCCGCGGTAGGTCGAGTAGTGGTGGTCGATGTCGTG  <  AE015451/2457331‑2457101                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGACCATGGGCAGCAGCTACAGCATCCAGTACGTCCGCGAGCCTGGTGGCCCGCTGCCGGCCCAGGTGCAGATGGCGGTGGAAACCATCCTGCACGACATCGACCACCACTACTCGACCTACCGCGGCGATTCCATCGTAAGCCAGTTCAACCGCTTGCCTGCGGG                                                                                                                                                                                                                                                   <  1:595818/207‑1                                  GGGTGGTCCGACCATGGGCAGCAGCTACAGCATCCAGTACGTCCGCGAGCCTGGTGGCCCGCTGCCGGCCCAGGTGCAGATGGCGGTGGAAACCATCCTGCACGACATCGACCACCACTACTCGACCTACCGCGGCGATTCCATCGTAAGCCAGTTCAACCGCTTGCCTGCGGGCCAGT                                                                                                                                                                                                                                              >  2:723876/1‑179                                                                                                                                         ggCATCGACCACCACTGCTCGCCCTACCGCGGCGATTCCATCGTAAGCCAGTTCAACCGCTTGCCTGCGGGCCAGTGCCTG                                                                                                                                                                                                                                         <  2:187711/79‑1                                                                                                                                               GACCACCACTACTCGACCTACCGCGGCGATTCCATCGTAAGCCAGTTCAACCGCTTGCCTGCGGGCCAGTGCCTGTGGTTCGGGCACTTGCTCGTGACGGGCCTGAGGGCCGAAGCCCCACAAGTCGCGCAATGGCTCTACGGT                                                                                                                                                                    >  1:159762/1‑144                                                                                                                                                        TACTCGACCTACCGCGGCGATTCCATCGTAAGCCAGTTCAACCGCTTGCCTGCGGGCCAGTGCCTGTGGTTCGGGCACTTGCTCGTGACGGGCCTGAGGGCCGAAGCCCCACAAGTCGAGCAATGGCTCTACGGGGAGATCGAAAGCGCCATCGCTCTGCTCGGCAAGGAGCT                                                                                                                              >  1:179323/1‑173                                                                                                                                                                            TTCCATCGTAAGCCAGTTCAACCGCTTGCCTGCGGGCCAGTGCCTGTGGTTCGGGCACTTGCTCGTGACGGGCCTGAGGGCCGAAGCCCCACAAGTCGAGCAATGGCTCTACGGTGGGATCGAAcg                                                                                                                                                         >  2:256750/1‑124                                                                                                                                                                                                             GGGCCAGTGCCTGTGGTTCGGGCACTTGCTCGTGACCGGCCTGAGGGCCGAAGCCCCACAAGTCGAGCAATGGCTCTACGGTGAGATCGAAAGCGCCATCGCTCTGCTCGGCAAGGTGCTGACCCAGGCTGACCAACGCGAGCATGTCAGGCGGCAGAGCCAGGCACTGGCCCGCAGGCAAGCGGTTGAACTGGCTTACGATGGAATCGCCGCGGTAGGTCGAGTAGTGGTGGTCG          <  1:742935/236‑1                                                                                                                                                                                                                CCAGTGCCTGTGGTTCGGGCACTTGCTCGTGACGGGCCTGAGGGCCGAAGCCCCACAAGTCGAGCAATGGCTCTACGGTGAGATCGAAAGCGCCATCGCTCTGCTCGGCAAGGTGCTGACCCAGGCTGACCAACGCGAGCATGTCAGGCGGCAGAGCCAGGCACTGGCCCGCAGGCAAGCGGTTGAACTGGCTTACGATGGAATCGCCGCGGTAGGTCGAGTAGTGGTGGTCGAT        >  1:142160/1‑235                                                                                                                                                                                                                      CCTGTGGTTCGGGCACTTGCTCGTGACGGGCCTGAGGGCCGAAGCCCCACAAGTCGAGCAATGGCTCTACGGTGAGATCGAAAGCGCCATCGCTCTGCTCGGCAAGGTGCTGACCCAGGCTGACCAACGCGAGCATGTCAGGCGGCAGAGCCAGGCACTGGCCCGCAGGCAAGCGGTTGAACTGGCTTACGATGGAATCGCCGCGGTAGGTCGAGTAGTGGTGGTCGATGTCGTG  >  1:498794/1‑235                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGACCATGGGCAGCAGCTACAGCATCCAGTACGTCCGCGAGCCTGGTGGCCCGCTGCCGGCCCAGGTGCAGATGGCGGTGGAAACCATCCTGCACGACATCGACCACCACTACTCGACCTACCGCGGCGATTCCATCGTAAGCCAGTTCAACCGCTTGCCTGCGGGCCAGTGCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/2456968‑2457184 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggccagtgcctgTGGTTCGGGCACTTGCTCGTGACGGGCCTGAGGGCCGAAGCCCCACAAGTCGAGCAATGGCTCTACGGTGAGATCGAAAGCGCCATCGCTCTGCTCGGCAAGGTGCTGACCCAGGCTGACCAACGCGAGCATGTCAGGCGGCAGAGCCAGGCACTGGCCCGCAGGCAAGCGGTTGAACTGGCTTACGATGGAATCGCCGCGGTAGGTCGAGTAGTGGTGGTCGATGTCGTG  <  AE015451/2457331‑2457101

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.