New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 3550927	67 (1.340)	4 (0.080)	4/320	NT	6.3%	coding (79/957 nt)	PP_3135	putative Glycosyl transferase
	?	AE015451	= 3550994	55 (1.160)					coding (146/957 nt)	PP_3135	putative Glycosyl transferase

CATTTGTACCACCGAACAGTTGATCAAGCGGGTCGAGGCACGTTGCGAAGCCTACCCATGGATCGATCTGGTGAAGCAGCGCAACGGTGCCTACGACCCGGAAGTGGAACCGTTACTGATGGCGCAAAGACGTCAGTATTTCTTCGGGGACAGCTGAAATGGCTAGCAAACCTGTGGATGTCATGGTGGTCAACTTCAATACCGCTGGACTGTTGCAGCCGATGTTCGATGCGCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/3550691‑3550927 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgcgctgcACCGAGTCATCGCGCGAGGCATTGTCGACCACCAGGTAACTGGCCAGCCGCTCGCTGTCGGCCCGGCGCAGCGCATCGAACATCGGCTGCAACAGTCCAGCGGTATTGAAGTTGACCACCATGACATCCACAGGTTTGCTAGCCATTTCAGCTGTCCCCGAAGAAATACTGACGTCTTTGCGCCATCAGTAACGGTTCCACTTCCGGGTCGTAGGCACCGTTGCGCTG  <  AE015451/3550994‑3550767                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CATTTGTACCACCGAACAGTTGATCAAGCGGGTCGAGGCACGTTGCGAAGCCTACCCATGGATCGATCTGGTGAAGCAGCGCAACGGTGCCTACGACCCGGAAGTGGAACCGTTACTGATGGCGCAAAGACGTCAGTATTTCTTCGGGGACAGCTGAAATGGCTAGCAAACCTGTGGATGTCATGGTGGTCAACTTCAATACCGCTGGACTGTTGCAGCCGATGTTCGATGCGCTG                                                                                                                                                                                                                                       <  1:552266/236‑1       TACCACCGAACAGTTGATCAAGCGGGTCGAGGCACGTTGCGAAGCCTACCCATGGATCGATCTGGTGAAGCAGCGCAACGGTGCCTACGACCCGGAAGTGGAACCGTTACTGATGGCGCAAAGACGTCAGTATTTCTTCGGGGACAGCTGAAATGGCTAGCAAACCTGTGGATGTCATGGTGGTCAACTTCAATACCGCTGGACTGTTGCAGCCGATGTTCGATGCGCTG                                                                                                                                                                                                                                       >  1:845803/1‑230                                    AGGCACGTTGCGAAGCCTACCCATGGATCGATCTGGTGAAGCAGCGCAACGGTGCCTACGACCCGGAAGTGGAACCGTTACTGATGGCGCAAAGACGTCAGTATTTCTTCGGGGACAGCTGAAATGGCTAGCAAACCTGTGGATGTCATGGTGGTCAACTTCAATACCGCTGGACTGTTGCAGCCGATGTTCGATGCGCTGC                                                                                                                                                                                                                                      >  2:338618/1‑202                                                                                                                                                    GGACAGCTGAAATGGCTAGCAAACCTGTGGATGTCATGGTGGTCAACTTCAATACCGCTGGACTGTTGCAGCCGATGTTCGATGCGCTGCACCGAGTCATCGCGCGAGGCATTGTCGACCACCAGGTACCTGGCCAGCCGCTCGCTGTCGG                                                                                                                                                                         >  2:899979/1‑151                                                                                                                                                           TGAAATGGCTAGCAAACCTGTGGATGTCATGGTGGTCAACTTCAATACCGCTGGACTGTTGCAGCCGATGTTCGATGCGCT                                                                                                                                                                                                                                        >  2:419894/1‑81                                                                                                                                                                          ACCTGTGGATGTCATGGTGGTCAACTTCAATACCGCTGGACTGTTGCAGCCGATGTTCGATGCGCTGCACCGAGTCATCGCGCGAGGCATTGTCTACCACCAGGTAACTGGCCCGCCGCTCGCTGTCGGCCCGGCGCAGCGCATCGAACATCCGCT                                                                                                                                              >  1:79880/1‑156                                                                                                                                                                                                AACTTCAATACCGCTGGACTGTTGCAGCCGATGTTCGATGCGCTGCACCGAGTCATCGCGCGAGGCATTGTCGACCACCAGGTAACTGGCCAGCCGCTCGCTGTCGGCCCGGCGCA                                                                                                                                                                >  2:524816/1‑116                                                                                                                                                                                                                             GATGTTCGATGCGCTGCACCGAGTCATCGCGCGAGGCATTGTCGACCACCAGGTAACTGGCCAGCCGCTCGCTGTCGGCCCGGCGCAGCGCATCGAACATCGGCTGCAACAGTCCAGCGGTATTGAAGTTGACCACCATGACATCCACAGGTTTGCTAGCCATTTCAGCTGTCCCCGAAGAAATACTGACGTCTTTGCGCCATCAGTAACGGTTCCACTTCCGGGTCGTAGGC              >  2:366117/1‑233                                                                                                                                                                                                                                  TCGATGCGCTGCACCGAGTCATCGCGCGAGGCATTGTCGACCACCAGGTAACTGGCCAGCCGCTCGCTGTCGGCCCGGCGCAGCGCATCGAACATCGGCTGCAACAGTCCAGCGGTATTGAAGTTGACCACCATGACATCCACAGGTTTGCTAGCCATTTCAGCTGTCCCCGAAGAAATACTGACGTCTTTGCGCCATCAGTAACGGTTCCACTTCCGGGTCGTAGGCACCGTTG       >  1:338621/1‑235                                                                                                                                                                                                                                         GCTGCACCGAGTCATCGCGCGAGGCATTGTCGACCACCAGGTAACTGGCCAGCCGCTCGCTGTCGGCCCGGCGCCGCGCATCGAACATCGGCTG                                                                                                                                             >  2:371760/1‑94                                                                                                                                                                                                                                         GCTGCACCGAGTCATCGCGCGAGGCATTGTCGACCACCAGGTAACTGGCCAGCCGCTCGCTGTCGGCCCGGCGCAGCGCATCGAACATCGGCTGCAACAGTCCAGCGGTATTGAAGTTGACCACCATGCCATCCACAGGTTTGCTAGCCATTTCAGCTGTCCCCGAAGAAATACTGACGACTTTGCGCCATCAGTAA                                      >  2:286511/1‑197                                                                                                                                                                                                                                         GCTGCACCGAGTCATCGCGCGAGGCATTGTCGACCACCAGGTAACTGGCCAGCCGCTCGCTGTCGGCCCGGCGCAGCGCATCGAACATCGGCTGCAACAGTCCAGCGGTATTGAAGTTGACCACCATGACATCCACAGGTTTGCTAGCCATTTCAGCTGTCCCCGAAGAAATACTGACGTCTTTGCGCCATCAGTAACGGTTCCACTTCCGGGTCGTAGGCACCGTTGCGCTG  >  2:563625/1‑233                                                                                                                                                                                                                                         GCTGCACCGAGTCATCGCGCGAGGCATTGTCGACCACCAGGTAACTGGCCAGCCGCTCGCTGTCGGCCCGGCGCAGCGCATCGAACATCGGCTGCAACAGTCCAGCGGTATTGAAGTTGACCACCATGACATCCA                                                                                                    >  1:739491/1‑135                                                                                                                                                                                                                                         GCTGCACCGAGTCATCGCGCGAGGCATTGTCGACCACCAGGTAACTGGCCAGCCGCTCGCTGTCGGCCCGGCGCAGCGCATCGAACATCGGCTGCAACAGTCCAGCGGTATTGAAGTTGACCACCATGACATCCA                                                                                                    <  2:739488/135‑1                                                                                                                                                                                                                                         GCTGCACCGAGTCATCGCGCGAGGCATTGTCGACCACCAGGTAACTGGCCAGCCGCTCGCTGTCGGCCCGGCGCAGCGCATCGAACATCGGCTGCAACAGTCCAGCGGTATTGAAGTTGACCACCATG                                                                                                           >  2:65407/1‑128                                                                                                                                                                                                                                         GCTGCACCGAGTCATCGCGCGAGGCATTGTCGACCACCAGGTAACTGGCCAGCCGCTCGCTGTCGGCCCGGCGCAGCGCATCGAACATCGGCTGCAACAGTCCAGCGG                                                                                                                               >  2:231622/1‑108                                                                                                                                                                                                                                         GCTGCACCGAGTCATCGCGCGAGGCATTGTCGACCACCAGGTAACTGGCCAGCCGCTCGCTGTCGGCCCGGCGCAGCGCATCGAACATCGGCTGCAACAGTCCAGCGG                                                                                                                               <  1:231624/108‑1                                                                                                                                                                                                                                         GCTGCACCGAGTCATCGCGCGAGGCATTGTCGACCACCAGGTAACTGGCCAGCCGCTCGCTGTCGGCCCGGCGCAGCGCATCGAACATCGGCTGCAACAGTC                                                                                                                                     >  2:440252/1‑102                                                                                                                                                                                                                                         GCTGCACCGAGTCATCGCGCGAGGCATTGTCGACCACCAGGTAACTGGCCAGCCGCTCGCTGTCGGCCCGGCGCAGCGCATCGAACATCGGCTGCAACAGTC                                                                                                                                     <  1:440255/102‑1                                                                                                                                                                                                                                         GCTGCACCGAGTCATCGCGCGAGGCATTGTCGACC                                                                                                                                                                                                        <  2:673821/35‑1                                                                                                                                                                                                                                         GCTGCACCGAGTCATCGCGCGAGGCATTGTCGACC                                                                                                                                                                                                        >  1:673824/1‑35                                                                                                                                                                                                                                            GCACCGAGTCATCGCGCGAGGCATTGTCGACCACCAGGTAACTGGCCAGCCGCTCGCTGTCGGCCCGGCGCAGCGCATCGAACATCGGCTGCAACCGTCCAGCGGTATTGAAGTTGA                                                                                                                   >  2:140111/1‑117                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CATTTGTACCACCGAACAGTTGATCAAGCGGGTCGAGGCACGTTGCGAAGCCTACCCATGGATCGATCTGGTGAAGCAGCGCAACGGTGCCTACGACCCGGAAGTGGAACCGTTACTGATGGCGCAAAGACGTCAGTATTTCTTCGGGGACAGCTGAAATGGCTAGCAAACCTGTGGATGTCATGGTGGTCAACTTCAATACCGCTGGACTGTTGCAGCCGATGTTCGATGCGCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/3550691‑3550927 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgcgctgcACCGAGTCATCGCGCGAGGCATTGTCGACCACCAGGTAACTGGCCAGCCGCTCGCTGTCGGCCCGGCGCAGCGCATCGAACATCGGCTGCAACAGTCCAGCGGTATTGAAGTTGACCACCATGACATCCACAGGTTTGCTAGCCATTTCAGCTGTCCCCGAAGAAATACTGACGTCTTTGCGCCATCAGTAACGGTTCCACTTCCGGGTCGTAGGCACCGTTGCGCTG  <  AE015451/3550994‑3550767

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.