| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451 | = 3799802 | 51 (1.020) | 3 (0.060) | 3/326 | NT | 5.7% | coding (137/1125 nt) | PP_3360 | conserved membrane protein of unknown function |
| ? | AE015451 | = 3799806 | 50 (1.040) | coding (141/1125 nt) | PP_3360 | conserved membrane protein of unknown function | |||||
ACTGACTCAGTCAACCCAGCGTGGTGAAATCCGATCGACCTGTTGCGCCTCTTTGACGTCCCAAGAAAGCACCTTGGCAAATCAACCCAGAGGCGAGGTACTCATGAACGACCGCATCATCGCGTTTTTCACCGAAACCACCGTATTCGGCATCTCCATTCTCAATCTGCTGGTGGCGCTGACAGTCGCCACCTTGGTCTTCCTGGTCGCCCGTGCCGCCATCAGTTTCCTGATGCGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/3799563‑3799802‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgccgTACCCGGCGCATCAGGAAACTGATGGCGGCACGGGCGACCAGGAAGACCAAGGTGGCGACTGTCAGCGCCACCAGCAGATTGAGAATGGAGATGCCGAATACGGTGGTTTCGGTGAAAAACGCG < AE015451/3799806‑3799683 ACTGACTCAGTCAACCCAGCGTGGTGAAATCCGATCGACCTGTTGCGCCTCTTTGACGTCCCAAGAAAGCACCTTGGCAAATCAACCCAGAGGCGAGGTACTCATGAACGACCGCATCATCGCGTTTTTCACCGAAACCACCGTATTCGGCATCTCCATTCTCAATCTGCTGGTGGCGCTGACAGTCGCCACCTTGGTCTTCCTGGTCGCCCGTGCCGCCATCAGTTTCCTGATGC > 1:311719/1‑236 AGAAAGCACCTTGGCAAATCAACCCAGAGGCGAGGTACTCATGAACGACCGCATCATCGCGTTTTTCACCGAAACCACCGTATTCGGCATCTCCATTCTCAATCTGCTGGTGGCGCTGACAGTCGCCACCTTGGTCTTCCTGGTCGCCCGTGCCGCCATCAGTTTCCTGATGCGCCGTACCCGGCGCATCAGGAAACTGATGGCGGCACGGGCGACCAGGAAGACCctgtctctta > 1:334621/1‑226 GACCGCATCATCGCGTTTTTCACCGAAACCACCGTATTCGGCATCTCCATTCTCAATCTGCTGGTGGCGCTGACAGTCGCCACCTTGGTCTTCCTGGTCGCCCGTGCCGCCATCAGTTTCCTGATG < 1:628404/126‑1 GACCGCATCATCGCGTTTTTCACCGAAACCACCGTATTCGGCATCTCCATTCTCAATCTGCTGGTGGCGCTGACAGTCGCCACCTTGGTCTTCCTGGTCGCCCGTGCCGCCATCAGTTTCCTGATG > 2:628401/1‑126 CGAAACCACCGTATTCGGCATCTCCATTCTCAATCTGCTGGTGGCGCTGACAGTCGCCACCTTGGTCTTCCTGGTCGCCCGTGCCGCCATCAGTTTCCTGATGCGCCGTACCCGGCGCATCAGGAAACTGATGGCGGCACGGG < 2:334618/143‑1 GCCCGTGCCGCCATCAGTTTCCTGATGCGCCGTACCCGGCGCATCAGGAAACTGATGGCGGCACGGGCGACCAGGAAG < 1:581574/78‑1 CGTACCCGGCGCATCAGGAAACTGATGGCGGCACGGGCGACCAGGAAGACCAAGGTGGCGACTGTCAGCGCCACCAGCAGATTGAGAATGGAGATGCCGAATACGGTGGTTTCGGTGAAAAACGCG > 2:229770/1‑126 ACTGACTCAGTCAACCCAGCGTGGTGAAATCCGATCGACCTGTTGCGCCTCTTTGACGTCCCAAGAAAGCACCTTGGCAAATCAACCCAGAGGCGAGGTACTCATGAACGACCGCATCATCGCGTTTTTCACCGAAACCACCGTATTCGGCATCTCCATTCTCAATCTGCTGGTGGCGCTGACAGTCGCCACCTTGGTCTTCCTGGTCGCCCGTGCCGCCATCAGTTTCCTGATGCGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/3799563‑3799802‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgccgTACCCGGCGCATCAGGAAACTGATGGCGGCACGGGCGACCAGGAAGACCAAGGTGGCGACTGTCAGCGCCACCAGCAGATTGAGAATGGAGATGCCGAATACGGTGGTTTCGGTGAAAAACGCG < AE015451/3799806‑3799683 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |