New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | AE015451 | 4399867 = | 78 (1.560) | 4 (0.080) | 4/322 | NT | 5.3% | coding (23/972 nt) | PP_3878 | putative Phage minor capsid protein C |
? | AE015451 | 4399923 = | 68 (1.430) | coding (1235/1272 nt) | PP_3879 | Phage portal protein, HK97 family |
AAGCCGCTACGACGCCTATGCAATTGGCCGGCAGTGGGGGTGGCTGTCGATCAACGACATCCGGCGCCTGGAAAACATGCCGCCCGTTGCCAACGGCGACAGTTATCTGCAGCCGCTCAACATGACCGACGTAGCCAATGACCTGCCCGACATGACTAACCCCAACGTCCGCGCCCAGCTGGAACAGCAGCGCGACGACATCCTGAGGATGCTTGCCGCATGAAACGACATTTGCGCGCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/4400108‑4399867 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcgctgcTGTTCCAGCTGGGCGCGGACGTTGGGGTTAGTCATGTCGGGCAGGTCATTGGCTACGTCGGTCATGTTGAGCGGCTGCAGATAACTGTCGCCGTTGGCAACGGGCGGCATGTTTTCCAGGCGCCGGATGTCGTTGATCGACAGCCACCCCCACTGCCGGCCAATTGCATAGGCGTCGTAGCGGCTTTTCTGGTCGCCGCGCAGCAGGCCAGAGAGGT > AE015451/4399923‑4400139 AAGCCGCTACGACGCCTATGCAATTGGCCGGCAGTGGGGGTGGCTGTCGATCAACGACATCCGGCGCCTGGAAAACATGCCGCCCGTTGCCAACGGCGACAGTTATCTGCAGCCGCTCAACATGACCGACGTAGCCAATGACCTGCCCGACATGACTAACCCCAACGTCCGCGCCCAGCTGGAACAGCAGCGCGACGACATCCTGAGGATGCTTGCCGCATGAAACGACATTTGCG < 1:541371/236‑1 GCAGTGGGGGTGGATGTCGAGCAACGACATCCGGCGCCTGGAAAACATGCCGCCCGTTGCCAACGGCGACAGTTATCTGCAGCCGCTCAACATGACCGACGTAGCCAATGACCTGCCCGACATGACTAACCCCAACGTCCGCGCCCAGCTGGAACAGCAGCGCGACGACATCCTGAGGATGCTTGCCGCATGAAACGACATTTGCGCGCTGCTGTTCCAGCTGGG < 2:746779/225‑1 GTGGCTGTCGATCAACGACATCCGGCGCCTGGAAAACATGCCGCCCGTTGCCAACGGCGACAGTTATCTGCAGCCGCTCAACATGACCGACGTAGCCAATGACCTGCCCGACATGACTAACCCCAACGTCCGCGCCCAGCTGGAACAGCAGCGCGACGACATCCTGAGGATGCTTGCCGCATGGAACGACATTTGCGC > 2:928957/1‑198 TCCGGCGCCTGGAAAACATGCCGCCCGTTGCCAACGGCGACAGTTATCTGCAGCCGCTCAACATGACCGACGTAGCCAATGACCTGCCCGACATGACTAACCCCAACGTCCGCGCCCAGCTGGAACAGCAGCGCGACGACATCCTGAGGATGCTTGCCGCATGAAACGACATTTGCGCGCTGCTGTTCCAGCTGGGCGCGGACGTTGGGGTTAGTCATGTCGGGCAGGTCATTGGC < 1:507255/236‑1 GCCGCCCGTTGCCAACGGCGACAGTTATCTGCAGCCGCTCAACATGACCGACGTAGCCAATGACCTGCCCGACATGACTAACCCCAACGTCCGCGCCCAGCTGGAACAGCAGCGCGACGACATCCTGAGGATGCTTGCCGCATGAAACGACATTTGCGCGCTGCTGTTCCAGCTGGGCGCGGACGTTGGGGTTAGTCATGTCGGGCAGGTCATTGGCTACGTCG < 1:76228/224‑1 CATGACCGACGTAGCCAATGACCTGCCCGACATGACTAACCCCAACGTCCGCGCCCAGCTGGAACAGCAGCGCGACGACATCCTGAGGATGCTTGCCGCATGAAACGACATTTGC > 2:664717/1‑115 CGCGACGACATCCTGAGGATGCTTGCCGCATGAAACGACATTTGCGCGCTGCTGTTCCAGCTGGGCGCGGACGTTGGGGTTAGTCATGTCGGGCAGGTCATTGGCTACGTCGGTCATGTTGAGCGGCTGCAGATAACTGTCGCCGTTGGCAACGGGCGGCATGTTTTCCAGGCGCCGGATGTCG > 1:598396/1‑184 GCGCTGCTGTTCCAGCTGGGCGCGGACGTTGGGGTTAGTCATGTCGGGCAGGTCATTGGCTACGTCGGTCATGTTGAGCGGCTGCAGATAACTGTCGCCGTTGGCAACGGGCGGCATGTTTTCCAGGCGCCGGATGTCGTTGATCGACAGCCACCCCCACTGCC > 2:912209/1‑164 CTGCTGTTCCAGCTGGGCGCGGACGTTGGGGTTAGTCATGTCGGGCAGGTCATTGGCTACGTCGGTCATGTTGAGCGGCTGCAGATAACTGTCGCCGTTGGCAACGGGCGGCATGTTTTCCAGGCGCCGGATGTCGTTGATCGACAGCCACCCCCACTGCCGGCCAATTGCATAGGCGTCGTAGCGGCTTTTCTGGTCGCCGCGCAGCAGGCCAGAGAGGT < 1:51960/221‑1 TGCTGTTCCAGCTGGGCGCGGACGTTGGGGTTAGTCATGTCGGGCAGGTCATTGGCTACGTCGGTCATGTTGAGCGGCTGCAGATAACTGTCGCCGTTGGCAACGGGCGGCATGTTTTCCAGGCGCCGGATGTCGTTGATCGACAGCCACCCCCACTGCCGGCCAATTGCATAGGCGTCGTAGCGGCTTTTCTGGTCGCCGCGC < 2:459331/204‑1 TGCTGTTCCAGCTGGGCGCGGACGTTGGGGTTAGTCATGTCGGGCAGGTCATTGGCTACGTCGGTCATGTTGAGCGGCTGCAGATAACTGTCGCCGTTGGCAACGGGCGGCATGTTTTCCAGGCGCCGGATGTCGTTGATCGACAGCCACCCCCACTGCCG < 1:490839/161‑1 TGCTGTTCCAGCTGGGCGCGGACGTTGGGGTTAGTCATGTCGGGCAGGTCATTGGCTACGTCGGTCATGTTGAGCGGCTGCAGATAACTGTCGCCGTTGGCAACGGGCGGCATGTTTTCCAGGCGCCGGATGTCGTTGATCGACAGCCACCCCCACTGCCG > 2:490836/1‑161 CTGTTCCAGCTGGGCGCGGACGTTGGGGTTAGTCATGTCGGGCAGGTCATTGGCTACGTCGGTCATGTTGAGCGGCTGCAGATAACTGTCGCCGTTGGCAACGGGCGGCATGTTTTCCAGGCGCCGGATGTCGTTGATCGACAGCCACCCCCACTG < 1:552844/156‑1 AAGCCGCTACGACGCCTATGCAATTGGCCGGCAGTGGGGGTGGCTGTCGATCAACGACATCCGGCGCCTGGAAAACATGCCGCCCGTTGCCAACGGCGACAGTTATCTGCAGCCGCTCAACATGACCGACGTAGCCAATGACCTGCCCGACATGACTAACCCCAACGTCCGCGCCCAGCTGGAACAGCAGCGCGACGACATCCTGAGGATGCTTGCCGCATGAAACGACATTTGCGCGCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/4400108‑4399867 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcgctgcTGTTCCAGCTGGGCGCGGACGTTGGGGTTAGTCATGTCGGGCAGGTCATTGGCTACGTCGGTCATGTTGAGCGGCTGCAGATAACTGTCGCCGTTGGCAACGGGCGGCATGTTTTCCAGGCGCCGGATGTCGTTGATCGACAGCCACCCCCACTGCCGGCCAATTGCATAGGCGTCGTAGCGGCTTTTCTGGTCGCCGCGCAGCAGGCCAGAGAGGT > AE015451/4399923‑4400139 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |