New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 4579332	51 (1.020)	3 (0.060)	3/318	NT	6.3%	coding (779/2211 nt)	glgB	1,4‑alpha‑glucan branching enzyme
	?	AE015451	= 4579374	42 (0.890)					coding (737/2211 nt)	glgB	1,4‑alpha‑glucan branching enzyme

CCCTTGGTGGCAGGCGTCGATGAACGCGGCGAAATCTTCGGCACTGCCGTAGCGCGAGGTGGGTGCGAACATCGACAGTGGTTGATAGCCCCAGGAGCCGCCGAACGGGTGCTCCATGATCGGCAGCAGTTCGATGTGGGTAAAGCCCAGCTCCTGCACATAGGGCACCAGCCGCTCGGCCAGTTCCCGCCAATTGTAGAAACGCCCGATTTCCCCCGCTTCGTCCAGCTCGCAGCGCCATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/4579091‑4579332 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcgccatgCCTACAACGCGCCGTTGTCGATCTACGAGCTGCACCCAGGATCATGGCGCTGCGAGCTGGACGAAGCGGGGGAAATCGGGCGTTTCTACAATTGGCGGGAACTGGCCGAGCGGCTGGTGCCCTATGTGCAGGAGCTGGGCTTTACCCACATCGAACTGCTGCCGATCATGGAGCACCCGTTCGGCGGCTCCTGGGGCTATCAACCACTGTCGATGTTCGCACCCACCTCGCGCTA  <  AE015451/4579374‑4579140                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CCCTTGGTGGCAGGCGTCGATGAACGCGGCGAAATCTTCGGCACTGCCGTAGCGCGAGGTGGGTGCGAACATCGACAGTGGTTGATAGCCCCAGGAGCCGCCGAACGGGTGCTCCATGATCGGCAGCAGTTCGATGTGGGTAAAGCCCAGCTCCTGCACATAGGGCACCAGCCGCACGGCCAGTTCCCGCCAATTGTAGAAACGCCCGATTTCCCCCGCTTCGTCCAGCTCGCAGC                                                                                                                                                                                                                                                   <  1:512635/236‑1                                                                                                                           GCAGCAGTTCGATGTGGGTAAAGCCCAGCTCCTGCACATAGGGCACCAGCCGCTCGGCCAGTTCCCGCCAATTGTAGAAACGCCCGATTTCCCCCGCTTCGTCCAGCTCGCAGCGCCATGCCTACAACGCGCCGTTGTCGATCTACGAGCTGCACCCAGGATCATGGCGC                                                                                                                                                                                           >  1:398174/1‑170                                                                                                                           GCAGCAGTTCGATGTGGGTAAAGCCCAGCTCCTGCACATAGGGCACCAGCCGCTCGGCCAGTTCCCGCCAATTGTAGAAACGCCCGATTTCCCCCGCTTCGTCCAGCTCGCAGCGCCATGCCTACAACGCGCCGTTGTCGATCTACGAGCTGCACCCAGGATCATGGCGC                                                                                                                                                                                           <  2:398171/170‑1                                                                                                                                                                                                     TAGAAACGCCCGATTTCCCCCGCTTCGTCCAGCTCGCAGCGCCATGCCTACAACGCGCCGTTGTCGCTCTACGAGCTGCACCCAGGATCATGGCGCTGCGAGCTGGACGAAGCGGGGGAAATCGGGCGTTTCTACAAT                                                                                                                                                 >  1:808797/1‑138                                                                                                                                                                                                                                                  GCCTACAACGCGCCGTTGTCGATCTACGAGCTGCACCCAGGATCATGGCGCTGCGAGCTGGACGAAGCGGGGGAAATCGGGCGTTTCTACAATTGGCGGGAACTGGCCGAGCGGCTGGTGCCCTATGTGCAGGAGCTGGGCTTTACCCACATCGAACTGCTGCCGATCATGGAGCACCCGTTCGGCGGCTCCTGGGGCTATCAACCACTGTCGATGTTCGCACCCACCTCGCGCTA  >  2:568236/1‑236                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CCCTTGGTGGCAGGCGTCGATGAACGCGGCGAAATCTTCGGCACTGCCGTAGCGCGAGGTGGGTGCGAACATCGACAGTGGTTGATAGCCCCAGGAGCCGCCGAACGGGTGCTCCATGATCGGCAGCAGTTCGATGTGGGTAAAGCCCAGCTCCTGCACATAGGGCACCAGCCGCTCGGCCAGTTCCCGCCAATTGTAGAAACGCCCGATTTCCCCCGCTTCGTCCAGCTCGCAGCGCCATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/4579091‑4579332 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcgccatgCCTACAACGCGCCGTTGTCGATCTACGAGCTGCACCCAGGATCATGGCGCTGCGAGCTGGACGAAGCGGGGGAAATCGGGCGTTTCTACAATTGGCGGGAACTGGCCGAGCGGCTGGTGCCCTATGTGCAGGAGCTGGGCTTTACCCACATCGAACTGCTGCCGATCATGGAGCACCCGTTCGGCGGCTCCTGGGGCTATCAACCACTGTCGATGTTCGCACCCACCTCGCGCTA  <  AE015451/4579374‑4579140

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.