New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? AE015451 76184 =35 (0.700)4 (0.080) 4/322 NT 8.8% coding (26/1374 nt) trkA NAD‑binding component of TrK potassium transporter
?AE015451 76333 = 50 (1.050)coding (1211/1311 nt) rsmB Ribosomal RNA small subunit methyltransferase B

GTCTCGTCACTGTTGGTTACCGCCACCAGCATGTCGGCGTCGTCGGCACCGGCCTGACGCAGTACCGTCGGCAGTGAGCCACGGCCCTGGACGGTGCGGATGTCCAGGCGGTCGCCGAGGTCGCGCAGGCGGTCGCCGTCGGTGTCGACCACGGTAATGTCGTTGGCTTCGCTGGCCAGGTGTTCAGCCAGCGTACCGCCTACCTGCCCTGCGCCGAGGATGATGATCTTCATGCGCTACTCCCTATCCTTTGTTCTTATCCGCGCGAGGCGGCGATCTTGATCAGCTTGGCATAGTAGAAACCGTCGTGGCCGCCTTCCTGGGCCAGCAACTGACGGCCGTGGGGCTGGCGCAGGCCGGCTTCGGTCGCCAGGTCCAGCTCACGAGCGCCCGGGGTGCGCGCGAGGAAGGCTTTGATCACTTCAGTGTTCTCGGTCGG  >  AE015451/75977‑76415
                                                                                                                                                                                                               |                                                                                                                                                                                                                                       
gTCTCGTCACTGTTGGTTACCGCCACCAGCATGTCGGCGTCGTCGGCACCGGCCTGACGCAGTACCGTCGGCAGTGAGCCACGGCCCTGGACGGTGCGGATGTCCAGGCGGTCGCCGAGGTCGCGCAGGCGGTCGCCGTCGGTGTCGACCACGGTAATGTCGTTGGCTTCGCTGGCCAGGTGTTCAGCCAGCGTACCGCCTACCTGCCCTGCGCCGAGGATGATGATCTTCATgcg                                                                                                                                                                                                             >  1:379843/1‑236 (MQ=255)
                   ccGCCACCAGCATGTCGGCGTCGTCGGCACCGGCCTGACGCAGTACCGTCGGCAGTGAGCCACGGCCCTGGACGGTGCGGATGTCCAGGCGGTCGCCGAGGTCGCGCAGGCGGTCGCCGTCGGTGTCGACCACGGTAATGTCGTTGGCTTCGCTGGCCAGGTGTTCAGCCAGCGTACCGCCTACCTGCCCTGCGCCGAGGATGATGATCTTCATgc                                                                                                                                                                                                              <  1:136594/216‑1 (MQ=255)
                     gCCACCAGCATGTCGGCGTCGTCGGCACCGGCCTGACGCAGTACCGTCGGCAGTGAGCCACGGCCCTGGACGGTGCGGATGTCCAGGCGGTCGCCGAGGTCGCGCAGGCGGTCGCCGTCGGTGTCGACCACGGTAATGTCGTTGGCTTCGCTGGCCAGGTGTTCAGCCAGCGTACCGCCTACCTGCCCTGCGCCGAGGATGATGATc                                                                                                                                                                                                                     <  2:406599/207‑1 (MQ=255)
                         ccaGCATGTCGGCGTCGTCGGCACCGGCCTGACGCAGTACCGTCGGCAGTGAGCCACGGCCCTGGACGGTGCGGATGTCCAGGCGGTCGCCGAGGTCGCGCAGGCGGTCGCCGTCGGTGTCGACCACGGTAATGTCGTTGGCTTCGCTGGCCAGGTGTTCAGCCAGCGTACCGCCTACCTGCCCTGCGCCGAGgatgatgcgct                                                                                                                                                                                                                    >  2:442246/1‑200 (MQ=255)
                              ggctttggccacgctgcaaggcgagctgctcgatgccctgtggccgaccctggaagtgggcggcatgctgctatacgccacctgctccacattgccgaccgagaacactgaagtgatcaaagccttcctcgcgcgcaccccgggcgctcgtgagctggacctggcgaccgaagccggCCTGCGCCGAGGATGATGATCTTCATGCGCTACTCCCTATCCTTTGTTCTTATCcg                                                                                                                                                                                  <  2:879270‑M1/56‑1 (MQ=255)
                                 tCGGCGTCGTCGGCACCGGCCTGACGCAGTACCGTCGGCAGTGAGCCACGGCCCTGGACGGTGCGGATGTCCAGGCGGTCGCCGAGGTCGCGCAGGCGGTCGCCGTCGGTGTCGACCACGGTAATGTCGTTGGCTTCGCTGGCCAGGTGTTCAGCCAGCGTACCGCCTACCTGCCCTGCGCCGAGGATGATGATCTTCATGCGCTACTCCCTATCCTTTGTTCTTATCCGCGCGAg                                                                                                                                                                            >  1:481269/1‑236 (MQ=255)
                                  ttggccacgctgcaaggcgagctgctcgatgccctgtggccgaccctggaagtgggcggcatgctgctatacgccacctgctccacattgccgaccgagaacactgaagtgatcaaagccttcctcgcgcgcaccccgggcgctcgtgagctggacctggcgaccgaagccggCCTGCGCCGAGGATGATGATCTTCATGCGCTACTCCCTATCCTTTGTTCTTATCCGCGCGAgg                                                                                                                                                                           >  1:879273‑M1/174‑236 (MQ=255)
                                                   gCCTGACGCAGTACCGTCGGCAGTGAGCCACGGCCCTGGACGGTGCGGATGTCCAGGCGGTCGCCGAGGTCGCGCAGGCGGTCGCCGTCGGTGTCGACCACGGTAATGTCGTTGGCTTCGCTGGCCAGGTGTTCAGCCAGCGTACCGCCTACCTGCCCTGCGCCGAGGATGATGATCTTCATGCGCTACTCCCTATCCTTTGTTCTTATCCGCGCGAGGCGGCGATCTTGATCa                                                                                                                                                            <  1:545586/234‑1 (MQ=255)
                                                     cTGACGCAGTACCGTCGGCAGTGAGCCACGGCCCTGGACGGTGCGGATGTCCAGGCGGTCGCCGAGGTCGCGCAGGCGGTCGCCGTCGGTGTCGACCACGGTAATGTCGTTGGCTTCGCTGGCCAGGTGTTCAGCCAGCGTACCGCCTACCTGCCCTGCGCCGAGGATGATGATCTTCATGCGCTACTCCCTATCCTTTGTTCTTATCCGCGCGAGGCGGCGATCTTGATCAGCtt                                                                                                                                                        <  1:353741/236‑1 (MQ=255)
                                                                      gCAGGGGGCCACGGCCCGGGACGGTGCGGATGTCCAGGCGGTCGCCGAGGTCGCGCAGGCGGTCGCCGTCGGTGTCGACCACGGTAATGTCGTTGGCTTCGCTGGCCAGGTGTTCAGCCAGCGTACCGCCTACCTGCCCTGCGCCGAGGATGATGATc                                                                                                                                                                                                                     <  2:130104/158‑1 (MQ=255)
                                                                       ggccgaccctggaagtgggcggcatgctgctatacgccacctgctccacattgccgaccgagaacactgaagtgatcaaagccttcctcgcgcgcaccccgggcgctcgtgagctggacctggcgaccgaagccggCCTGCGCCGAGGATGATGATCTTCATGCGCTACTCCCTATCCTTTGTTCTTATCCGCGCGAGGCGGCGATCtt                                                                                                                                                                 <  2:814675‑M1/73‑1 (MQ=255)
                                                                       ggccgaccctggaagtgggcggcatgctgctatacgccacctgctccacattgccgaccgagaacactgaagtgatcaaagccttcctcgcgcgcaccccgggcgctcgtgagctggacctggcgaccgaagccggCCTGCGCCGAGGATGATGATCTTCATGCGCTACTCCCTATCCTTTGTTCTTATCCGCGCGAGGCGGCGATCtt                                                                                                                                                                 >  1:814678‑M1/137‑209 (MQ=255)
                                                                              ccACGGCCCTGGACGGTGCGGATGTCCAGGCGGTCGCCGAGGTCGCGCAGGCGGTCGCCGTCGGTGTCGACCACGGTAATGTCGTTGGCTTCGCTGGCCAGGTGTTCAGCCAGCGTACCGCCTACCTGCCCTGCGCCGAGGATGATGATCTTCATGCGCTACTc                                                                                                                                                                                                       <  1:240622/164‑1 (MQ=255)
                                                                                                 ggATGTCCAGGCGGTCGCCGAGGTCGCGCAGGCGGTCGCCGTCGGTGTCGACCACGGTAATGTCGTTGGCTTCGCTGGCCAGGTGTTCAGCCAGCGTACCGCCTACCTGCCCTGCGCCGAGGATGATGATCTTCATGCGCTACTCCCTATCCTTTGTTCTTATCCGCGCGAgg                                                                                                                                                                           <  1:742866/173‑1 (MQ=255)
                                                                                                 ggATGTCCAGGCGGTCGCCGAGGTCGCGCAGGCGGTCGCCGTCGGTGTCGACCACGGTAATGTCGTTGGCTTCGCTGGCCAGGTGTTCAGCCAGCGTACCGCCTACCTGCCCTGCGCCGAGGATGATGATCTTCATGCGCTACTCCCTATCCTTTGTTCTTATCCGCGCGAgg                                                                                                                                                                           >  2:742863/1‑173 (MQ=255)
                                                                                                 ggATGTCCAGGCGGTCGCCGAGGTCGCGCAGGCGGTCGCCGTCGGTGTCGACCACGGTAATGTCGTTGGCTTCGCTGGCCAGGTGTTCAGCCAGCGTACCGCCTACCTGCCCTGCGCCGAGGATGATGATCTTCATGCGCTACTCCCTATCCTTTGTTCTTATCCGCGCGAGGCGGCGATCTTGATCa                                                                                                                                                            >  2:836718/1‑188 (MQ=255)
                                                                                                 ggATGTCCAGGCGGTCGCCGAGGTCGCGCAGGCGGTCGCCGTCGGTGTCGACCACGGTAATGTCGTTGGCTTCGCTGGCCAGGTGTTCAGCCAGCGTACCGCCTACCTGCCCTGCGCCGAGGATGATGATCTTCATGCGCTACTCCCTATCCTTTGTTCTTATCCGCGCGAGGCGGCGATCTTGATCAGCTTGGCATAGTAGAAACCGTCGTGgccgc                                                                                                                              >  1:187273/1‑218 (MQ=255)
                                                                                                 ggATGTCCAGGCGGTCGCCGAGGTCGCGCAGGCGGTCGCCGTCGGTGTCGACCACGGTAATGTCGTTGGCTTCGCTGGCCAGGTGTTCAGCCAGCGTACCGCCTACCTGCCCTGCGCCGAGGATGATGATCTTCATGCGCTACTCCCTATCCTTTGTTCTTATCCGCGCGAGGCGGCGATCTTGATCAGCTTGGCATAGTAGAAACCGTCGTGGCCGCCTTCCt                                                                                                                        >  1:388910/1‑224 (MQ=255)
                                                                                                 ggATGTCCAGGCGGTCGCCGAGGTCGCGCAGGCGGTCGCCGTCGGTGTCGACCACGGTAATGTCGTTGGCTTCGCTGGCCAGGTGTTCAGCCAGCGTACCGCCTACCTGCCCTGCGCCGAGGATGATGATCTTCATGCGCTACTCCCTATCCTTTGTTCTTATCCGCGCGAGGCGGCGATCTTGATCAGCTTGGCATAGTAGAAACCGTCGTGGCCGCCTTCCTGGGcc                                                                                                                   >  2:365652/1‑229 (MQ=255)
                                                                                                 ggATGTCCAGGCGGTCGCCGAGGTCGCGCAGGCGGTCGCCGTCGGTGTCGACCACGGTAATGTCGTTGGCTTCGCTGGCCAGGTGTTCAGCCAGCGTACCGCCTACCTGCCCTGCGCCGAGGATGATGATCTTCATGCGCTACTCCCTATCCTTTGTTCTTATCCGCGCGAGGCGGCGATCTTGATCAGCTTGGCATAGTAGAAACCGTCGTGGCCGCCTTCCTGGGCCAg                                                                                                                 >  1:284464/1‑231 (MQ=255)
                                                                                                 ggATGTCCAGGCGGTCGCCGAGGTCGCGCAGGCGGTCGCCGTCGGTGTCGACCACGGTAATGTCGTTGGCTTCGCTGGCCAGGTGTTCAGCCAGCGTACCGCCTACCTGCCCTGCGCCGAGGATGATGATCTTCATGCGCTACTCCCTATCCTTTGTTCTTATCCGCGCGAGGCGGCGATCTTGATCAGCTTGGCATAGTAGAAACCGTCGTGGCCGCCTTCCTGGGCCAGCAACt                                                                                                            >  1:307738/1‑236 (MQ=255)
                                                                                                 ggATGTCCAGGCGGTCGCCGAGGTCGCGCAGGCGGTCGCCGTCGGTGTCGACCACGGTAATGTCGTTGGCTTCGCTGGCCAGGTGTTCAGCCAGCGTACCGCCTACCTGCCCTGCGCCGAGGATGATGATCTTCATGCGCTACTCCCTATCCTTTGTTCTTATCCGCGCGAGGCGGCGATCTTGATCAGCTTGGCATAGTAGAAACCGTCGTGGCCGCCTTCCTGGGCCAGCAACt                                                                                                            >  1:404977/1‑236 (MQ=255)
                                                                                                  gATGTCCAGGCGGTCGCCGCGGTCGCGCAGGCGGTCGCCGTCGGTGTCGACCACGGTAATGTCGTTGGCTTCGCTGGCCAGGTGTTCAGCCAGCGTACCGCCTACCTGCCCTGCGCCGAGGATGATGATCTTCATGCGCTACTCCCTATCCTTTGTTCTTATCCGCGCGAGGCGGCGATCTTGATCAGCTTg                                                                                                                                                       <  1:216554/192‑1 (MQ=255)
                                                                                                           gCGGTCGCCGAGGTCGCGCAGGCGGTCGCCGTCGGTGTCGACCACGGTAATGTCGTTGGCTTCGCTGGCCAGGTGTTCAGCCAGCGTACCGCCTAcctgccctg                                                                                                                                                                                                                                      >  1:252528/1‑104 (MQ=255)
                                                                                                           gCGGTCGCCGAGGTCGCGCAGGCGGTCGCCGTCGGTGTCGACCACGGTAATGTCGTTGGCTTCGCTGGCCAGGTGTTCAGCCAGCGTACCGCCTAcctgccctg                                                                                                                                                                                                                                      <  2:252525/104‑1 (MQ=255)
                                                                                                           gCGGTCGCCGAGGTCGCGCAGGCGGTCGCCGTCGGTGTCGACCACGGTAATGTCGTTGGCTTCGCTGGCCAGGGGTTCAGCCAGCGTACCGCCTACCTGCCCTGCGCCGGGGATGATGATCTTCATGCGCTACTCCCTATCCTTTGTTCTTATCcgc                                                                                                                                                                                 >  1:196433/1‑157 (MQ=255)
                                                                                                                              aGGGGGTCGCCGTCGGTTTCTCCCACGGTAATGTCGTTGGCTTCGATAGCCAGGTGTTCAGCCAGCGTACCGCCTACCTGCCCTGCGCCGAGGATGATGATCTTc                                                                                                                                                                                                                  <  2:871846/105‑1 (MQ=255)
                                                                                                                              aGGCGGTCGCCGGCGGTGTCGACCACGGTAATGTCGTTGGCTTCGCTGGCCAGGTGTTCAGCCAGCTTACCGCCTACCTGCCCTGCGCCGAGGATGATGATCTTCATGCGCTACTCCCTATCCTTTGTTCTTATCCGCGCGAGGCGGCGATCtt                                                                                                                                                                 <  2:300327/154‑1 (MQ=255)
                                                                                                                                             gtgtCGACCACGGTAATGTCGTTGGCTTCGCTGGCCAGGTGTTCAGCCAGCGTACCGCCTACCTGCCCTGCGCCGAGGATGATGATCTTCATGCGCTACTCCCTATCCTTTGTTCTTATCCGCGCGAGGCGGCGATCTTGATCAGCTTGGCATAGTAGAAACcgtcgt                                                                                                                                    >  1:646828/1‑168 (MQ=255)
                                                                                                                                              tgtCGACCACGGTAATGTCGTTGGCTTCGCTGGCCAGGTGTTCAGCCAGCGTACCGCCTACCTGCCCTGCGCCGAGGATGATGATCTTCATGCGCTACTCCCTATCCTTTGTTCTTATCCGCGCGAGGCGGCGATCtt                                                                                                                                                                 >  2:868462/1‑138 (MQ=255)
                                                                                                                                              tgtCGACCACGGTAATGTCGTTGGCTTCGCTGGCCAGGTGTTCAGCCAGCGTACCGCCTACCTGCCCTGCGCCGAGGATGATGATCTTCATGCGCTACTCCCTATCCTTTGTTCTTATCCGCGCGAGGCGGCGATCtt                                                                                                                                                                 <  1:868465/138‑1 (MQ=255)
                                                                                                                                                   aCCACGGTAATGTCGTTGGCTTCGCTGGCCAGGTGTTCAGCCAGCGTACCGCCTACCTGCCCTgcgc                                                                                                                                                                                                                                   >  1:169835/1‑67 (MQ=255)
                                                                                                                                                   aCCACGGTAATGTCGTTGGCTTCGCTGGCCAGGTGTTCAGCCAGCGTACCGCCTACCTGCCCTgcgc                                                                                                                                                                                                                                   <  2:169834/67‑1 (MQ=255)
                                                                                                                                                               tCGTTGGCTTCGCTGGCCAGGTGTTCAGCCAGCGTCCCGCCTACCTGCCCTGCGCCGAGGATGATGATCTTCATGCGCTACTCCCTATCCTTTGTTCTTATCCGCGCGAGGCGGCGATCTTGATCAGCTTGGCATAGTAGAAACCGTCGTGGCCGCCTTCCTGGGCCAGCAACTGACGGCCGTGGGGCTGGCGCAGGCCGGc                                                                                <  2:307735/202‑1 (MQ=255)
                                                                                                                                                                     gCTTCGCTGGCCAGGTGTTCAGCCAGCGTACCGCCTACCTGCCCTGCGCCGAGGATGATGATCTTCATGCGCTACTCCCTATCCTTTGTTCTTATCCGCGCGAGGCGGCGATCTTGATCAGCTTGGCATAGTAGAAACCGTCGTGGCCGCCTTCCTGGGCCAGCAACTGACGGCCGTGGGGCTGGCGCAGGCCGGCTTCGGTCGCCAg                                                                    <  1:300251/208‑1 (MQ=255)
                                                                                                                                                                       ttCGCTGGCCAGGTGTTCAGCCAGCGTACCGCCTACCTGCCCTGCGCCGAGGATGATGATCTTCATGCGCTACTCCCTATCCTTTGTTCTTATCCGCGCGAGGCGGCGATCTTGATCAGCTTGGCATAGTAGAAACCGTCGTGGCCGCCTTCCTGGGCCAGCAACTGACGGCCGTGGGGCTGGCGCAGGCCGGCTTCGGTCGCCAGGTCCAGCTCAc                                                         >  1:383692/1‑217 (MQ=255)
                                                                                                                                                                           cTGGCCAGGTGTTCAGCCAGCGTACCGCCTACCTGCCCTGCGCCGAGGATGATGATCTTCATGCGCTACTCCCTATCCTTTGTTCTTATCCGCGCGAGGCGGCGATCTTGATCAGCTTGGCATAGTAGAAACCGTCGTGGCCGCCTTCCTGGGCCAGCAACTGACGGCCGTGGGGCTGGCGCAGGCCGGCTTCGGTCGCCAGGTCCAGCTCACGAGCGCCCGGGGTGCGCGCGAg                                   >  1:834993/1‑235 (MQ=255)
                                                                                                                                                                            tGGCCAGGTGTTCAGCCAGCGTACCGCCTACCTGCCCTGCGCCGAGGATGATGATCTTCATGCGCTACTCCCTATCCTTTGTTCTTATCCGCGCGAGGCGGCGATCTTGATCAGCTTGGCATAGTAGAAACCGTCGTGGCCGCCTTCCTGGGCCAGCAACTGACGGCCGTGGGGCTGGCGCAGGCCGGCTTCGGTCGCCAGGTCCAGCTCACGAGCGCCCGGGGTGCGCGCGa                                    <  2:404974/233‑1 (MQ=255)
                                                                                                                                                                                      ttCAGCCAGCGTACCGCCTACCTGCCCTGCGCCGAGGATGATGATCTTCATGCGCTACTCCCTATCCTTTGTTCTTATCCGCGCGAGGCGGCGATCTTGATCAGCTTGGCATAGTAGAAACCGTCGTGGCCGCCTTCCTGGGCCAGCAACTGACGGCCGTGGGGCTGGCGCAGGCCGGCt                                                                               <  1:496995/180‑1 (MQ=255)
                                                                                                                                                                                                 tACCGCCTACCTGCCCTGCGCCGAGGATGATGATCTTCATGCGCTACTCCCTATCCTTTGTTCTTATCCGCGCGAGGCGGCGATCTTGATCAGCTTGGCATAGTAGAAACCGTCGTGGCCGCCTTCCTGGGCCAGCAACTGACGGCCGTGGGGCTGGCGCAGGCCGGCTTCGGTCGCCAGGTCCAGCTCACGAGCGCCCGGGGTGCGCGCGAGGAAGGCTTTGATCACTTCAgtgt            >  1:814999/1‑236 (MQ=255)
                                                                                                                                                                                                 tACCGCCTACCTGCCCTGCGCCGAGGATGATGATCTTCATGCGCTACTCCCTATCCTTTGTTCTTATCCGCGCGAGGCGGCGATCTTGATCAGCTTGGCATAGTAGAAACCGTCGTGGCCGCCTTCCTGGGCCAGCAACTGACGGCCGTGGGGCTGGCGCAGGCCGGCTTCGGTCGCCAGGTCCAGCTCACGAGCGCCCGGGGTGCGCGCGAGGAAGGCTTTGATCACTTCAgtgt            >  1:152336/1‑236 (MQ=255)
                                                                                                                                                                                                            tgccctgcGCCGAGGATGATGATCTTCATGCGCTACTCCCTATCCTTTGTTCTTATCCGCGCGAGGCGGCGATCTTGATCAGCTTGGCATAGTAGAAACCGTCGTGGCCGCCTTCCTGGGCCAGCAACTGACGGCCGTgg                                                                                                 >  2:417119/1‑140 (MQ=255)
                                                                                                                                                                                                            tgccctgcGCCGAGGATGATGATCTTCATGCGCTACTCCCTATCCTTTGTTCTTATCCGCGCGAGGCGGCGATCTTGATCAGCTTGGCATAGTAGAAACCGTCGTGGCCGCCTTCCTGGGCCAGCAACTGACGGCCGTgg                                                                                                 <  1:417122/140‑1 (MQ=255)
                                                                                                                                                                                                            tgccctgcGCCGAGGATGATGATCTTCATGCGCTACTCCCTATCCTTTGTTCTTATCCGCGCGAGGCGGCGATCTTGATCAGCTTGGCATAGTAGAAACCGTCGTGGCCGCCTTCCTGGGCCAGCAACTGACGGCCGTGGGGCTGGCGCAGGCCGGCTTCGGTCGCCAGGTCCAGCTCACGAGCGCCCGGGGTGCGCGCGAGGAAGGCTTTGATCACTTCAGTGTTCtcggtcgg  >  1:249289/1‑235 (MQ=255)
                                                                                                                                                                                                               |                                                                                                                                                                                                                                       
GTCTCGTCACTGTTGGTTACCGCCACCAGCATGTCGGCGTCGTCGGCACCGGCCTGACGCAGTACCGTCGGCAGTGAGCCACGGCCCTGGACGGTGCGGATGTCCAGGCGGTCGCCGAGGTCGCGCAGGCGGTCGCCGTCGGTGTCGACCACGGTAATGTCGTTGGCTTCGCTGGCCAGGTGTTCAGCCAGCGTACCGCCTACCTGCCCTGCGCCGAGGATGATGATCTTCATGCGCTACTCCCTATCCTTTGTTCTTATCCGCGCGAGGCGGCGATCTTGATCAGCTTGGCATAGTAGAAACCGTCGTGGCCGCCTTCCTGGGCCAGCAACTGACGGCCGTGGGGCTGGCGCAGGCCGGCTTCGGTCGCCAGGTCCAGCTCACGAGCGCCCGGGGTGCGCGCGAGGAAGGCTTTGATCACTTCAGTGTTCTCGGTCGG  >  AE015451/75977‑76415

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.