New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 1433054	29 (0.580)	5 (0.110)	5/298	NT	14.0%	intergenic (+42/+82)	xenA/PP_1255	XenA/putative cis‑4‑hydroxy‑D‑proline oxidase
	?	AE015451	= 1433106	36 (0.820)					intergenic (+94/+30)	xenA/PP_1255	XenA/putative cis‑4‑hydroxy‑D‑proline oxidase

GGCGTGGGGCTTTGGTACGCCGCAGTTGGCGGAGGCCGCATTGCAGGCCAACCAGCTGGATCTGGTTTCGGTAGGGCGCGCGCACCTGGCCGACCCGCACTGGGCTTACTTTGCTGCCAAGGAGCTGGGGGTGGAAAAAGCCTCCTGGACCTTGCCGGCGCCTTATGCACACTGGCTCGAGCGTTATCGCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCACCCACAGAGACACCGCAGGTTTCAGATACTGCACCCTCTCTGTGGAAGTGGGCTTGCCCGCGAATGGGCCGGTAGGGGCTAAAACCGGTTCAGTCGGTATGCGCCCATCTCAGGCCCACCAGTCTGCTCAGCCAACCGCCCCACCCATTCCGCCGTCACCGCCGCCTGGGTCAACCCCAGGTGCTGATGCCCAAACGCCAACAGCACCCGCCCATCGCAC  >  AE015451/1432820‑1433277                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                ggCGTGGGGCTTTGGTACGCCGCAGTTGGCGGAGGCCGCATTGCAGGCCAACCAGCTGGATCTGGTTTCGGTAGGGCGCGCGCACCTGGCCGACCCGCACTGGGCTTACTTTGCTGCCAAGGAGCTGGGGGTGGAAAAAGCCTCCTGGACCTTGCCGGCGCCTTATGCACACTGGCTCGAGCGTTATCGCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCC                                                                                                                                                                                                                                 <  1:427988‑M1/235‑1 (MQ=255)            ttGGTACGCCGCAGTTGGCGGAGGCCGCATTGCAGGCCAACCAGCTGGAACTGGTTTCGGTAGGGCGCGCGCACCTGGCCGACCCGCACTGGGCTTACTTTGCTGCCAAGGAGCTGGGGGTGGAAAAAGCCTCCTGGACCTTGCCGGCGCCTTATGCACACTGGCTCGAGCGTTATCGCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCC                                                                                                                                                                                                                                 <  1:309598‑M1/224‑1 (MQ=255)                    ccccAGTTGGCGGAGGCCGCATTGCAGGCCAACCAGCTGGATCTGGTTTCGGTAGGGCGCGCGCACCTGGCCGACCCGCACTGGGCTTACTTTGCTGCCAAGGAGCTGGGGGTGGAAAAAGCCTCCTGGACCTTGCCGGCGCCTTATGCACACTGGCTCGAGCGTTATCGCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCACCCACAGAGACACCg                                                                                                                                                                                                               <  2:559560/231‑1 (MQ=255)                       cAGTTGGCGGAGGCCGCATTGCAGGCCAACCAGCTGGATCTGGTTTCGGTAGGGCGCGCGCACCTGGCCGACCCGCACTGGGCTTACTTTGCTGCCAAGGAGCTGGGGGTGGAAAAAGCCTCCTGGACCTTGCCGGCGCCTTATGCACACTGGCTCGAGCGTTATCGCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCactt                                                                                                                                                                                                                             <  1:159214‑M1/217‑5 (MQ=255)                          ttGGCGGAGGCCGCATTGCAGGCCAACCAGCTGGATCTGGTTTCGGTAGGGCGCGCGCACCTGGCCGACCCGCACTGGGCTTACTTTGCTGCCAAGGAGCTGGGGGTGGAAAAAGCCTCCTGGACCTTGCCGGCGCCTTATGCACACTGGCTCGAGCGTTATCGCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCACCCACAGAGacac                                                                                                                                                                                                                 <  1:260666/226‑1 (MQ=255)                                     cGCATTGCAGGCCAACCAGCTGGATCTGGTTTCGGTAGGGCGCGCGCACCTGGCCGACCCGCACTGGGCTTACTTTGCTGCCAAGGAGCTGGGGGTGGAAAAAGCCTCCTGGACCTTGCCGGCGCCTTATGCACACTGGCTCGAGCGTTATCGCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCACCCACAGAGACACCGCAGGTTTCAGATACTGCAc                                                                                                                                                                                            <  1:724781/236‑1 (MQ=255)                                               gCCAACCAGCTGGATCTGGTTTCGGTAGGGCGCGCGCACCTGGCCGACCCGCACTGGGCTTACTTTGCTGCCAAGGAGCTGGGGGTGGAAAAAGCCTCCTGGACCTTGCCGGCGCCTTATGCACACTGGCTCGAGCGTTATCGCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCACCCACAGAGACACCGCAGGTTTCAGATACTGCACCCTCTCtgtg                                                                                                                                                                                  <  1:144488/236‑1 (MQ=255)                                                            aTCTGGTTTCGGTAGGGCGCGCGCACCTGGCCGACCCGCACTGGGCTTACTTTGCTGCCAAGGAGCTGGGGGTGGAAAAAGCCTCCTGGACCTTGCCGGCGCCTTATGCACACTGGCTCGAGCGTTATCGCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCCTTCGCGGGCCAGCCCGCACCCACaga                                                                                                                                                                                                                      >  2:50163/1‑187 (MQ=255)                                                                 gTTTCGGTAGGGCGCGCGCACCTGGCCGACCCGCACTGGGCTTACTTTGCTGCCAAGGAGCTGGGGGTGGAAAAAGCCTCCTGGACCTTGCCGGCGCCTTATGCACACTGGCTCGAGCGTTATCGCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCACCCACAGAGACACCGCAGGTTTCAGATACTGc                                                                                                                                                                                              <  2:237711/206‑1 (MQ=255)                                                                     cGGTAGGGCGCGCGCACCTGGCCGACCCGCACTGGGCTTACTTTGCTGCCAAGGAGCTGGGGGTGGAAAAAGCCTCCTGGACCTTGCCGGCGCCTTATGCACACTGGCTCGAGCGTTATCGCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCACCCACAGAGACACCGCAGGTTTCAGATACTGCACCCTCTCTGTGGAAGTgggcttgcccgc                                                                                                                                                                 >  1:893023‑M2/1‑219 (MQ=255)                                                                                      cTGGCCGACCCGCACTGGGCTTACTGTGCTGCCAAGGAGCTGGGCGTGGAAAAAGCCTCCTGGACCTTGCCGGCGCCTTATGCACACTGGCTCGAGCGTTATCGCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCACCCACAGAGACACCGCAGGTTTCa                                                                                                                                                                                                      <  2:145655/177‑1 (MQ=255)                                                                                             aCCCGCACTGGGCTTACTTTGCTGCCAAGGAGCTGGTGGTGGAAAAATCCTCCTGGACCTTGCCGGCGCCTTATGCACACTGGCTCGAGCGTTATCGCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCACCCACAGAGACACCGCAGGTTTCAGATACTGc                                                                                                                                                                                              <  2:503277/178‑1 (MQ=255)                                                                                               ccGCACTGGGCTTACTTTGCTGCCAAGGAGCTGGGGGTGGAAAAAGCCTCCTGGACCTTGCCGGCGCCTTATGCACACTGGCTCGAGCGTTATCGCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCACCCACAGAGACACCGCAGGTTTCAGATACTGCACCCTCTCTGTGGAAGTgg                                                                                                                                                                           >  1:617458‑M2/1‑193 (MQ=255)                                                                                                 gCACTGGGCTTACTTTGCTGCCAAGGAGCTGGGGGTGGAAAAAGCCTCCTGGACCTTGCCGGCGCCTTATGCACACTGGCTCGAGCGTTATCGCTGAGGCTTGGAGGGGCGGCTTTGCAGCCCCTTCGCGGGCAAGCCCg                                                                                                                                                                                                                                >  2:32499/1‑140 (MQ=255)                                                                                                     tGGGCTTACTTTGCTGCCAAGGAGCTGGGGGTGGAAAAAGCCTCCTGGACCTTGCCGGCGCCTTATGCACACTGGCTCGAGCGTTATCGCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCACCCACAGAGACACCGCAGGTTTCAGATACTGCACCCTCTCTGTGGAAGTGGGCTTGCCCGCGAATGGGCCGGTAGGGGCTAAAAcc                                                                                                                                        <  1:571423/224‑1 (MQ=255)                                                                                                        gCTTACTTTGCTGCCAAGGAGCTGGGGGTGGAAAAAGCCTCCTGGACCTTGCCGGCGCCTTATGCACACTGGCTCGAGCGTTATCGCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCacttccacagagagggtgcagtatctgaaacctgcggtgtctctgtgggtgcgggctt                                                                                                                                                                       <  1:604694‑M1/190‑59 (MQ=255)                                                                                                                  ctgcCAAGGAGCTGGGGGTGGAAAAAGCCTCCTGGACCTTGCCGGCGCCTTATGCACACTGGCTCGAGCGTTATCGCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCACCCACAGAGACACCGCAGGTTTCAGATACTGCACCCTCTCTGTGGAAGTGGGCTTGCCCGCGAATGGGCCGGTAGGGGCTAAAACCGGTTCAGTCGGTATGCGCCCAt                                                                                                                  >  2:863587/1‑233 (MQ=255)                                                                                                                    gcCAAGGAGCTGGGGGTGGAAAAAGCCTCCTGGACCTTGCCGGCGCCTTATGCACACTGGCTCGAGCGTTATCGCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCC                                                                                                                                                                                                                                 >  2:188775‑M1/1‑120 (MQ=255)                                                                                                                    gcCAAGGAGCTGGGGGTGGAAAAAGCCTCCTGGACCTTGCCGGCGCCTTATGCACACTGGCTCGAGCGTTATCGCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCC                                                                                                                                                                                                                                 <  1:188777‑M1/120‑1 (MQ=255)                                                                                                                     ccAAGGAGCTGGGGGTGGAAAAAGCCTCCTGGACCTTGCCGGCGCCTTATGCACACTGGCTCGAGCGTTATCGCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCacttccacagagagggtgcagtatctgaaacctgcggtgtc                                                                                                                                                                                        >  2:604691‑M1/1‑119 (MQ=255)                                                                                                                                        aaaaGCCTCCTGGACCTTGCCGGCGCCTTATGCACACTGGCTCGAGCGTTATCGCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCACCCACAGAGACACCGCAGGTTTCAGATACTGCACCCTCTCTGTGGAAGTGGGCTTGCCCGCGAATGGGCCGGTAGGGGCTAAAACCGGTTCAGTCGGTATGCGCCCAtct                                                                                                                >  1:847098/1‑213 (MQ=255)                                                                                                                                        aaaaGCCTCCTGGACCTTGCCGGCGCCTTATGCACACTGGCTCGAGCGTTATCGCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCACCCACAGAGACACCGCAGGTTTCAGATACTGCACCCTCTCTGTGGAAGTGGGCTTGCCCGCGAATGGGCCGGTAGGGGCTAAAACCGGTTCAGTCGGTATGCGCCCATCTCAGGCCCACCAGTCTGCTCAGc                                                                                          <  1:863590/235‑1 (MQ=255)                                                                                                                                           aGCCTCCTGGACCTTGCCGGCGCCTTATGCACAGTGGCTCGAGCGTTATCGCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCACCCACAGAGACACCGCAGGTTTCAGATACTGCACCCTCTCTGTGGAAGTgggcttgcccgcga                                                                                                                                                               >  2:789975‑M2/1‑149 (MQ=255)                                                                                                                                            gCCTCCTGGACCTTGCCGGCGCCTTATGCACACTGGCTCGAGCGTTATCGCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCACCCACAGAGACACCGCAGGTTTCAGATACTGCACCCTCTCTGTGGAAGTgggcttgcccgcgaatgg                                                                                                                                                           >  1:192774‑M2/1‑148 (MQ=255)                                                                                                                                                            cGGCGCCTTATGCACACTGGCTCGAGCGTTATCGCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCACCCACAGAGACACCGCAGGTTTCAGATACTGCACCCTCTCTGTGGAAGTGGGCTTGCCCGCGAATGGGCCGGTAGGGGCTAAAACCGGTTCAggc                                                                                                                               >  1:239513/1‑176 (MQ=255)                                                                                                                                                             ggCGCCTTATGCACACTGGCTCGAGCGTTATCGCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCCAGCCCGCACCCACCGAGACAcccc                                                                                                                                                                                                              >  2:5082/1‑96 (MQ=255)                                                                                                                                                             ggCGCCTTATGCACACTGGCTCGAGCGTTATCGCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCACCCACAGAGACACCg                                                                                                                                                                                                               >  2:207567/1‑97 (MQ=255)                                                                                                                                                              gcgcCTTATGCACACTGGCTCGAGCGTTATCGCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCacttc                                                                                                                                                                                                                            <  2:368548‑M1/83‑6 (MQ=255)                                                                                                                                                              gcgcCTTATGCACACTGGCTCGAGCGTTATCGCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCacttc                                                                                                                                                                                                                            >  1:368551‑M1/1‑78 (MQ=255)                                                                                                                                                                      tGCACACTGGCTCGAGCGTTATCGCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCACCCACAGAGACACCGCAGGTTTCAGATACTGCACCCTCTCTGTGGAAGTGGGCTTGCCCGCGAATGGGCCGGTAGGGGCTAAAACCGGTTCAGTCGGTATGCGCCCATCTCAGGCccac                                                                                                       <  1:652890/192‑1 (MQ=255)                                                                                                                                                                            cTGGCTCGAGCGTTATCGCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCACCCACAGAGACACCGCAGGTTTCAGATACTGCACCCTCTCTGTGGAAGTGGGCTTGCCCGCGAATGGGCCGGTAGGGGCTAAAACCGGTTCAGTCGGTATGCGCCCATCTCAGGCCCACCAGTCTGCTCAGCCAACCGCCCCACCCATTCCGCCGTCACCGCCGCCTgg                                                     >  1:654166/1‑236 (MQ=255)                                                                                                                                                                                 tCGAGCGTTATCGCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCacttccacagagagggtgcagtatctgaaacctgc                                                                                                                                                                                              >  1:88938‑M1/1‑59 (MQ=255)                                                                                                                                                                                 tCGAGCGTTATCGCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCacttccacagagagggtgcagtatctgaaacctgc                                                                                                                                                                                              <  2:88938‑M1/94‑36 (MQ=255)                                                                                                                                                                                 tCGAGCGTTATCGCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCACCCACAGAGACACCGCAGGTTTCAGATACTGc                                                                                                                                                                                              >  1:85913/1‑94 (MQ=255)                                                                                                                                                                                 tCGAGCGTTATCGCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCACCCACAGAGACACCGCAGGTTTCAGATACTGc                                                                                                                                                                                              <  2:85913/94‑1 (MQ=255)                                                                                                                                                                                 tCGAGCGTTATCGCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCACCCACAGAGACACCGCAGGTTTCAGATACTGCAcc                                                                                                                                                                                           >  2:400041/1‑97 (MQ=255)                                                                                                                                                                                  cGAGCGTTATCGCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCACCCACAGAGACACCGCAGGTTTCAGATACTGCACCCTCTCTGTGGAAGTGGGCTTGCCCGCGAATGGGCCGGTAGGGGCTAAAACCGGtt                                                                                                                                    >  2:683947/1‑151 (MQ=255)                                                                                                                                                                                   gAGCGTTATCGCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCACCCACAGAGACACCGCAGGTTTCAGATACTGCACCCTCTCTGTGGAAGTGGGCTTGCCCGCGAATGGGCCGGTAGGGGCTAAAACCGGTTCAGTCGGTATGCGCCCATCTCAGGCCCACCAGTCTGCTCAGCCAACCGCCCCACCCCTTCCGCCGTCACCGCCGCCTGGGTCCAcc                                              >  1:85006/1‑236 (MQ=255)                                                                                                                                                                                                      tGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCacttccacagagagggtgcagtagctgaaacctgcgg                                                                                                                                                                                            >  1:331200‑M1/1‑38 (MQ=255)                                                                                                                                                                                                          ggggCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCACCCACAGAGACACCGCAGGTTTCAGATACTGCACCCTCTCTGTGGAAGTGGGCTTGCCCGCGAATGGGCCGGTAGGGGCTAAAACCGGTTCAGTCGGTATGCGCCCATCTCAGGCCCACCAGTCTGCTCAGCCAACCGCCCCACCCATTCCGCCGTCAccgcc                                                           <  1:658261/200‑1 (MQ=255)                                                                                                                                                                                                                gctTTGCAGCCCATTCGCGGGCAAGCCCGCACCCACAGAGACACCGCAGGTTTCAGATACTGCACCCTCTCTGTGGAAGTGGGCTTGCCCGCGAATGGGCCGGTAGGGGCTAAAACCGGTTCAGTCGGTATGCGCCCATCTCAGGCCCACCAGTCTGCTCAGCCAACCGCCCCACCCATTCCGCCGTCACCGCCGCCTGGGTCAACCCCAGGTGCTGATGCCCAAACGCCAACAg                  >  1:151081/1‑235 (MQ=255)                                                                                                                                                                                                                gctTTGCAGCCCATTCGCGGGCAAGCCCGCACCCACAGAGACACCGCAGGTTTCAGATACTGCACCCTCTCTGTGGAAGTGGGCTTGCCCGCGAATGGGCCGGTAGGGGCTAAAACCGGCTCAGTCGGTATGCGCCCATCTCAGGCCCACCAGTCTGCTCAGCCAACCGCCCCACCCATTCCCCCGTCCCCgccgcc                                                        >  1:150423/1‑197 (MQ=255)                                                                                                                                                                                                                gctTTGCAGCCCATTCGCGGGCAAGCCCGCACCCACAGAGACACCGCAGGTTTCAGATACTGCACCCTCTCTGTGGAAGTGGGCTTGCCCGCGAATGGGCCGGTAGGGGCTAAAAACGGTTCAGTCGGTATgcgc                                                                                                                      >  2:877489/1‑135 (MQ=255)                                                                                                                                                                                                                      cAGCCCATTCGCGGGCAAGCCCGCACCCACAGAGACACCGCAGGTTTCAGATACTGCACCCTCTCTGTGGAAGTGGGCTTGCCCGCGAATGGGCCGGTAGGGGCTAAAACCGGTTCAGTCGGTATGCGCCCATCTCAGGccc                                                                                                         >  2:651384/1‑142 (MQ=255)                                                                                                                                                                                                                          ccATTCGCGGGCAAGCCCacttccacagagagggtgcagtatctgaaacctgcggtgtctctgtgggtgcgggcttgcccgcgaatgggctgcaaagcagcccctccaagcctcagcgataacgctcgagccagtgtgcataaggcgccggcaaggtccaggaggc                                                                             >  1:192774‑M1/1‑18 (MQ=255)                                                                                                                                                                                                                              tCGCGGGCAAGCCCacttccacagagagggtgcagtatctgaaacctgcggtgtctctgtgggtgcgggcttgcccgcgaatgggctgcaaagcagcccctccaagcctcagcgataacgctcgagccactgtgcataaggcgccggcaaggtccaggaggct                                                                            >  2:789975‑M1/1‑14 (MQ=255)                                                                                                                                                                                                                                gcgGGCAAGCCCacttccacagagagggtgcagtatctgaaacctgcggtgtctctgtgggtgcgggcttgcccgcgaatgggctgcaaagcagcccctccaagcctcagcgataacgctcgagccagtgtgcataaggcgccggcaaggtccaggaggctttttccacccccagctccttggcagcaaagtaagcccagtgcgggtcggccaggtgcgcgcgccctaccg      >  1:893023‑M1/1‑12 (MQ=255)                                                                                                                                                                                                                                gcgGGCAAGCCCGCACCCACAGAGCCACCGCAGGTTTCAGATACTGCACCCTCTCTGTGGAAGTGGGCTTGCCCGCGAATGGGCCGGTAGGGGCTAAAACCGGTTCAGTCGGTATGCGCCCATCTCAGGCCCACCAGTCTGCTCAGTCAACCGCCCCACCCATTCCGCCGTCACCGCCGCCTGGGTCAACCCCAGGTGCTGATGCCCAAACGCCAACAGCACCCGCCCATCGcac  <  1:50163/235‑1 (MQ=255)                                                                                                                                                                                                                                gcgGGCAAGCCCGCACCCACAGAGACACCGCAGGTTTCAGATACTGCACCCTCTCTGTGGAAGTGGGCTTGCCCGCGAATGGGCCGGTAGGGGCTAAAACCGGTTCAGTCGGTATGCGCCCATCTCAGGCCCACCAGTCTGCTCAGCCAACCGCCCCACCCATTCCGCCGTCACCGCCGCCTGGGTCAACCCCAGGTGCTGATGCCCAAACGCCAACAGCAcc              <  1:529186/223‑1 (MQ=255)                                                                                                                                                                                                                                      aaGCCCGCACCCACAGAGACACCGCAGGTTTCAGATACTGCACCCTCTCTGTGGAAGTgggcttgcccgcgaatgggctgcaaagcagcccctccaagcctcagcgataacgctcgagccagtgtgcataaggcgccggcaaggtccaggaggctttttccacccccagctccttggcagcaaagtaagc                                         <  1:604694‑M2/190‑133 (MQ=255)                                                                                                                                                                                                                                         cccGCACCCACAGAGACACCGCAGGTTTCGGATACTGCACCCTCTCTGTGGAAGTGGGCTTGCCCGCGAATGGGCCGGTAGGGGCTAAAACCGGTTCAGTCGGTATGCGCCCATCTCAGGCCCACCAGTCTGCTCAGcc                                                                                         <  2:845517/139‑1 (MQ=255)                                                                                                                                                                                                                                          ccacttccacagagagggtgcagtatctgaaacctgcggtgtctctgtgggtgcgggcttgcccgcgaatgggctgcaaagcagcccctccaagcctcagcgataacgctcgagccagtgtgcataaggcgccggcaaggtccaggaggctttttccacccccagctccttggcagcaaagtaagcccagtgcgg                                >  1:617458‑M1/1‑2 (MQ=255)                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                GGCGTGGGGCTTTGGTACGCCGCAGTTGGCGGAGGCCGCATTGCAGGCCAACCAGCTGGATCTGGTTTCGGTAGGGCGCGCGCACCTGGCCGACCCGCACTGGGCTTACTTTGCTGCCAAGGAGCTGGGGGTGGAAAAAGCCTCCTGGACCTTGCCGGCGCCTTATGCACACTGGCTCGAGCGTTATCGCTGAGGCTTGGAGGGGCTGCTTTGCAGCCCATTCGCGGGCAAGCCCGCACCCACAGAGACACCGCAGGTTTCAGATACTGCACCCTCTCTGTGGAAGTGGGCTTGCCCGCGAATGGGCCGGTAGGGGCTAAAACCGGTTCAGTCGGTATGCGCCCATCTCAGGCCCACCAGTCTGCTCAGCCAACCGCCCCACCCATTCCGCCGTCACCGCCGCCTGGGTCAACCCCAGGTGCTGATGCCCAAACGCCAACAGCACCCGCCCATCGCAC  >  AE015451/1432820‑1433277

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.