New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | AE015451 | 4791752 = | 40 (0.800) | 3 (0.060) | 3/312 | NT | 8.5% | coding (2088/6525 nt) | pvdI | non‑ribosomal peptide synthetase (subunit of ferribactin synthase) |
? | AE015451 | 4791887 = | 28 (0.610) | coding (1953/6525 nt) | pvdI | non‑ribosomal peptide synthetase (subunit of ferribactin synthase) |
CGATACGCGCCAGCAGTGCCGGCGGGCAGGCCTCGCCGCCAAGCACCAGGCAACGCTGCGGCAGCACGCTGGCATCGGCGCAGGCATCGAGCAGCGCACCCAGGTGCGAAGGCACGATTTTCAGCGCATCGACGTGGTTTGCCGACAGGTAGGCGGCGAAACCGTCGGCATCGAGCACCGCCTCGCGCTGCAGCAGATGTACCGTCTTGCCGGCCCAGAGCGCGCCAAACAGCATGGTATGCCCAAGGTCGGCGGCAGGCGTGGAGACCATGGCGAAGTGTTCCAGATCGCCAAGGGCAATCCGCTCGGACAAGCCTTCAAGGTAATTGGCCAGCGCCCCATGAGACACCGCGACCCCCTTGGGCATACCGGTGGTGCCCGAGGTGTAGATCACATAAGCCAGGTTGCCGGAGTGAACCGCCACGGGCACCCCTGCCTCGCCACCTGCCGCGTTCAGCGCCAGGCAC > AE015451/4791517‑4791983 | tctcaaggccgggggggcgtatgtaccgctggagccgggtcagccgcagcagcgaatggcattcatgctgcgtgacgcacagatcaaggtcttgctcagggccgaggacgagcctggcccggccatcgggggcgtacagtgcctggcgctgaacgcggcaggtggcgaggcaggggtgcccgtggcggttcactccggcaacctggcttatgtgatctacacctcgggcaccaccg > 1:440573‑M1/236‑236 (MQ=255) cagcagTGCCGGCGGGCAGGCCTCGCCGCCAAGCACCAGGCAACGCTGCGGCAGCACGCTGGCATCGGCGCAGGCATCGAGCAGCGCACCCAGGTGCGAAGGCACGATTTTCAGCGCATCGACGTGGTTTGCCGACAGGTAGGCGGCGAAACCGTCGGCATCGAGCACCGCCTCGCGCTGCAGCAGATGTACCGTCTTGCCGGCCGAGAGCGCGCCAAACAGCATGGTATGCCCa > 1:847495/1‑235 (MQ=255) cagTGCCGGCGGGCAGGCCTCGCCGCCAAGCACCAGGCAACGCTGCGGCAGCACGCTGGCATCGGCGCAGGCATCGAGCAGCGCACCCAGGTGCGAAGGCACGATTTTCAGCGCATCGACGTGGTTTGCCGACAGGTAGGCGGCGAAACCGTCGGCATCGAGCACCGCCTCGCGCTGCAGCAGATGTACCGTCTTGCCGGCCCAGAGCGCGCCAAACAGCATGGTATGcc > 2:905373/1‑230 (MQ=255) gcggGCAGGCCTCGCCGCCAAGCACCAGGCAACGCTGCGGCAGCACGCTGGCATCGGCGCAGGCATCGAGCAGCGCACCCAGGTGCGAAGGCACGATTTTCAGCGCATCGACGTGGTTTGCCGACAGGTAGGCGGCGAAACCGTCGGCATCGAGCACCGCCTCGCGCTGCAGCAGATGTACCGTCTTGCCGGCCCAGAGCGCGCCAAACAGCATGGTATGCCCAAGGTCGGCGGCa > 1:728900/1‑236 (MQ=255) gcggGCAGGCCTCGCCGCCAAGCACCAGGCAACGCTGCGGCAGCACGCTGGCATCGGCGCAGGCATCGAGCAGCGCACCCAGGTGCGAAGGCACGATTTTCAGCGCATCGACGTGGTTTGCCGACAGGTAGGCGGCGAAACCGTCGGCATCGAGCACCGCCTCGCGCTGCAGCAGATGTACCGTCTTGCCGGCCCAGAGCGCGCCAAACAGCATGGTATGCCCAAGGTCGGCGGCa > 1:727199/1‑236 (MQ=255) gCAGGCCTCGCCGCCAAGCACCAGGCAACGCTGCGGCAGCACGCTGGCATCGGCGCAGGCATCGAGCAGCGCACCCAGGTGCGAAGGCACGATTTTCAGCGCATCGACGTGGTTTGCCGACAGGTAGGCGGCGAAACCGTCGGCATCGAGCACCGCCTCGCGCTGCAGCAGATGTACCGTCTTGCCGGCCCAGAGCGCGCCAAACAGCATGGTATGCCCAAGGTCGGCGGCAGGCg < 1:793601/236‑1 (MQ=255) gCCTCGCCGCCAAGCACCAGGCAACGCTGCGGCAGCACGCTGGCATCGGCGCAGGCATCGAGCAGCGCACCCAGGTGCGAAGGCACGATTTTCAGCGCATCGACGTGGTTTGCCGACAGGTAGGCGGCGAAACCGTCGGCATCGAGCACCGCCTCGCGCTGCAGCAGATGTACCGTCTTGCCGGCCCAGAGCGCGCCAAACAGCATGGTATGCCCAAGGTCGGCGGCAGGCGTg > 2:814064/1‑234 (MQ=255) cagcaCGCTGGCATCGGCGCAGGCATCGAGCAGCGCACCCAGGTGCGAAGGCACGATTTTCAGCGCATCGACGTGGTTTGCCGACAGGTAGGCGGCGAAACCGTCGGCATCGAGCACCGCCTCGCGCTGCAGCAGATGTACCGTCTTGCCGGCCCAGAGCGCGCCAAACAGCATGGTATGCCCAAGGTCGGCGGCAGGCGTGGAGACCATGGCGAAgtgt > 2:485109/1‑220 (MQ=255) caCGCTGGCATCGGAGCAGGCATCGAGCAGCGCACCCAGGTGCGAAGGCACGATTTTCAGCGCATCGACGTGGTTTGCCGACAGGTAGGCGGCGAAACCGTCGGCATCGAGCACCGCCTCGCGCTGCAGCAGATGTACCGTCTTGCCGGCCCAGAGCGCGCCAAACAGCATGGTATGCCCAAGGTCGGCGGCAGGCGTGGAGACCATGGc < 1:167134/210‑1 (MQ=255) gcgcAGGCATCGAGCAGCGCACCCAGGTGCGAAGGCACGATTTTCAGCGCATCGACGTGGTTTGCCGACAGGTAGGCGGCGAAACCGTCGGCATCGAGCACCGCCTCGCGCTGCAGCAGATGTACCGTCTTGCCGGCCCAGAGCGCGCCAAACAGCATGGTATGCCCAAGGTCGGCGGCAGGCGTGga > 1:157482/1‑188 (MQ=255) ggtcttgctcagggccgaggacgagcctggcccggccatcgggggcgtacagtgcctggcgctgaacgcggcaggtggcgaggcaggggtgcccgtggcggttcactccggcaacctggcttatgtgatctacacctcgggcaccaccGGTATGCCCAAGGTCGGCGGCAGGCGTGGAGACCATGGCGAAGTGTTCCAGATCGCCAAGGGc > 1:79304‑M1/149‑211 (MQ=255) aCCCAGGTGCGAAGGCACGATTTTCAGCGCATCGACGTGGTTTGCCGACAGGTAGGCGGCGAAACCGTCGGCATCGAGCACCGCCTCGCGCTGCAGCAGATGTACCGTCTTGCCGGCCCAGAGCGCGCCAAACAGCATGGTATGCCCAAGGTCGGCGGCAGGCGTGGAGACCATGGCGAAGTGTTCCAGATCGCCAAGGGCAATCCGCTCGGACAAGCCTTCAAGGTAATTGGCCa < 1:816003/236‑1 (MQ=255) aGGTGCGAAGGCACGATTTTCAGCGCATCGACGTGGTTTGCCGACAGGTAGGCGGCGAAACCGTCGGCATCGAGCACCGCCTCGCGCTGCAGCAGATGTACCGTCTTGCCGGCCCAGAGCGCGCCAAACAGCATGGTATGCCCAAGGTCGGCGGCAGGCGTGGAGACCATGGCGAAGTGTTCCAGATCGCCAAGGGCAATCCGCTCgg < 2:273888/208‑1 (MQ=255) cgaggacgagcctggcccggccatcgggggcgtacagtgcctggcgctgaacgcggcaggtggcgaggcaggggtgcccgtggcggttcactccggcaacctggcttatgtgatctacacctcgggcaccaccGGTATGCCCAAGGTCGGCGGCAGGCGTGGAGACCATGGCGAAGTGTTCCAGATCGCCAAGGGCAATCCGCTCGGACAAGCCtt < 1:323196‑M1/83‑1 (MQ=255) cgaggacgagcctggcccggccatcgggggcgtacagtgcctggcgctgaacgcggcaggtggcgaggcaggggtgcccgtggcggttcactccggcaacctggcttatgtgatctacacctcgggcaccaccGGTATGCCCAAGGTCGGCGGCAGGCGTGGAGACCATGGCGAAGTGTTCCAGATCGCCAAGGGCAATCCGCTCGGACAAGCCtt > 2:323193‑M1/134‑216 (MQ=255) aTTTTCAGCGCATCGACGTGGTTTGCCGACAGGTAGGCGGCGAAACCGTCGGCATCGAGCACCGCCTCGCGCTGCAGCAGATGTACCGTCTTGCCGGCCCAGAGCGCGCCAAACAGCATGGTATGCCCAAGGTCGGCGGCAGGCGTgg > 2:687124/1‑148 (MQ=255) ttttCAGCGCATCGACGTGGTTTGCCGACAGGTAGGCGGCGAAACCGTCGGCATCGAGCACCGCCTCGCGCTGCAGCAGATGGACCGTCTTGCCGGCCCAGAGCGCGCCCCACAGCATGGGATGCCCAAGGTcggcgg > 2:224071/1‑138 (MQ=255) tCAGCGCATCGACGTGGTTTGCCGACAGGTAGGCGGCGAAACCGTCGGCATCGAGCACCGCCTCGCGCTGCAGCAGATGTACCGTCTTGCCGGCCCAGAGCGCGCCAAACAGCATGGTATGCCCAAGGTCGGCGGCAGGCGTGGAGACCATGGCGAAGTGTTCCAGATCGCCAAGGGCAATCCGCTCGGACAAGCCTTCAAGGTAATTGGCCAGCGCCCCATGAGACACCGCGAcc < 1:719793/236‑1 (MQ=255) aTCGACGTGGTTTGCCGACAGGTAGGCGGCGAAACCGTCGGCATCGAGCACCGCCTCGCGCTGCAGCAGATGTACCGTCTTGCCGGCCCAGAGCGCGCCAAACAGCATGGTATGCCCAAGGTCGGCGGCAGGCGTGGAGACCATGGCGAAGTGTTCCAGATCGCCAAGGGCAATCCGCTCGGACAAGCCTTCAAGGTAATTGGCCAGCGCCCCATGAGACACCGCGACCCCCTTgg < 1:585966/236‑1 (MQ=255) gACGTGGTTTGCCGACAGGTAGGCGGCGAAACCGTCGGCATCGAGCACCGCCTCGCGCTGCAGCAGATGTACCGTCTTGCCGGCCCAGAGCGCGCCAAACAGCATGGTATGCCCAAGGTCGGCGGCAGGCGTGGAGACCATGGCGAAGTGTTCCAGATCGCCAAGGGCAATCCGCTCGGACAAGCCTTCAAGGTa > 1:762094/1‑195 (MQ=255) gACGTGGTTTGCCGACAGGTAGGCGGCGAAACCGTCGGCATCGAGCACCGCCTCGCGCTGCAGCAGATGTACCGTCTTGCCGGCCCAGAGCGCGCCAAACAGCATGGTATGCCCAAGGTCGGCGGCAGGCGTGGAGACCATGGCGAAGTGTTCCAGATCGCCAAGGGCAATCCGCTCGGACAAGCCTTCAAGGTAATTGGCCa < 1:269925/203‑1 (MQ=255) tttGCCGACAGGTAGGCGGCGAAACCGTCGGCATCGAGCACCGCCTCGCGCTGCAGCAGATGTACCGTCTTGCCGGCCCAGAGCGCGCCAAACAGCATGGTATGCCCAAGGTCGGCGGCAGGCGTGGAGACCATGGCGAAGTGTTCCAGATCGCCAAGGGCAATCCGCTCGGACAAGCCTTCAAGGTAATTGGCCAGCGCCCCa < 2:629375/204‑1 (MQ=255) cGACAGGTAGGCGGCGAAACCGTCGGCATCGAGCACCGCCTCGCGCTGCAGCAGATGTACCGTCTTGCCGGCCCAGAGCGCGCCAAACAGCATGGTATGCCCAAGGTCGGCGGCAGGCGTGGAGACCCTGGCGAAGTGTTCCAGATCGCCAAGGGCAATCCGCTCGGACAAGCCTTCAAgga > 2:269922/1‑181 (MQ=255) gACGGGTAGGCGGCGCAACCGTCGGCATCGAGCACCGCCTCGCGCTGCAGCAGATGTACCGTCTTGCCGGCCCAGAGCGCGCCAAACAGCATGGTATGCCCAAGGTcggcg < 2:9142/111‑1 (MQ=255) gACAGGTAGGCGGCGAAACCGTCGGCATCGAGCACCGCCTCGCGCTGCAGCAGATGTACCGTCTTGCCGGCCCAGAGCGCGCCAAACAGCATGGTATGCCCAAGGTCGGCGGCAGGCGTGGAGACCATGGCGAAGTGTTCCAGATCGCCAAGGGCAATCCGCTCGGACAAGCCTTCAAGGTAATTGGCCAGCGCCCCATGAGACACCGCGACCCCCTTGGGCATACCGgtggtg < 2:728897/234‑1 (MQ=255) ggTAGGCGGCGAAACCGTCGGCATCGAGCACCGCCTCGCGCTGCAGCAGATGTACCGTCTTGCCGGCCCAGAGCGCGCCAAACAGCATGGTATGCCCAAGGTCGGCGGCAGGCGTGGAGACCATGGCGAAGTGTTCCAGATCGCCAAg > 2:185650/1‑148 (MQ=255) ggcggcGAAACCGTCGGCATCGAGCACCGCCTCGCGCTGCAGCAGATGTACCGTCTTGCCGGCCCAGAGCGCGCCAAACAGCATGGTATGCCCAAGGTCGGCGGCAGGCGTGGAGACCATGGCGAAGTGTTCCAGATCGCCAAGGGCAATCCGCTCGGACAAGCCTTCAAGGTAATTGGCCAGCGCCCCATGAGACACCGCGACCCCCTTGGGCATACCGGTGGTGCCCGAGgtgt < 1:814067/236‑1 (MQ=255) gcgAAACCGTCGGCATCGAGCACCGCCTCGCGCTGCAGCAGATGTACCGTCTTGCCGGCCCAGAGCGCGCCAAACAGCATGGTATGCCCAAGGTCGGCGGCAGGCGTGGAGACCATGGCGAAGTGTTCCAGATCGCCAAGGGCAATCCGCTCGGACAAGCCTTCAAGGTAATTg > 2:111922/1‑174 (MQ=255) cGGCATCGAGCACCGCCTCGCGCTGCAGCAGATGTACCGTCTTGCCGGCCCAGAGCGCGCCAAACAGCATGGTATGCCCAAGGTCGGCGGCAGGCGTGGAGACCATGGCGAAGTGTTCCAGATCGCCAAGGGCAATCCGCTCGGACAAGCCTTCAAGGTAATTGGCCAGCGCCCCATGAGACACCGCGACCCCCTTGGGCATACCGGTGGTGCCCGAGGTGTAGATCACATAAg < 2:727196/234‑1 (MQ=255) gctccGCCTCGCTGTGCAGCAGATGGACCGTCTTGCCGGCCCAGAGCGCGCCAAACAGCATGGTATGCCCAAGGTCGGCGGCAGGCGTGGAGACCATGGCGAAGTGTTCCAGACCGCCAAGGGCAATCCGCTCGGACAAGCCTTCAAGGTAATTGGc < 2:640848/154‑1 (MQ=255) gCACCGCCTCGCGCTGCAGCAGATGTACCGTCTTGCCGGCCCAGAGCGCGCCAAACAGCATGGTATGCCCAAGGTCGGCGGCAGGCGTGGAGACCATGGCGAAGTGTTCCAGATCGCCAAGGGCAATCCGCTCGGACAAGCCTTCAAGGTAATTGGCCAGCGCCCCATGAGACACCGCGACCCCCTTgg < 1:737191/189‑1 (MQ=255) gCACCGCCTCGCGCTGCAGCAGATGTACCGTCTTGCCGGCCCAGAGCGCGCCAAACAGCATGGTATGCCCAAGGTCGGCGGCAGGCGTGGAGACCATGGCGAAGTGTTCCAGATCGCCAAGGGCAATCCGCTCGGACAAGCCTTCAAGGTAATTGGCCAGCGCCCCATGAGACACCGCGACCCCCCTGGGCATACCggc > 2:187742/1‑198 (MQ=255) aCCGCCTCGCGCTGCAGCAGATGCACCGTCTGGCCGGCCCAGAGCGCGCCAAGCAGCATGGTATGCCCGAGGTCGGCGGCAGGCGTGGAGACCa < 2:847492/94‑1 (MQ=255) cgcgCTGCAGCAGATGTACCGTCTTGCCGGCCCAGAGCGCGCCAAACAGCATGGTATGCCCAAGGTCGGCGGCAGGCGTGGAGACCATGGCGAAGTGTTCCAGATCGCCAAGGGCAATCCGCTCGGACAAGCCTTCAAGGTAATTGGCCAGCGCCCCATGAGACACCGCGACCCCCTTGGGCATACCggtg > 2:75572/1‑191 (MQ=255) tGCACCAGATGTACCGTCTTGCCGGCCCAGAGCGCGCCAAACAGCATGGTATGCCCAAGGTCGGCGGCAGGCGTGGAGACCATGGCGAAGTGTTCCAGATCGCCAAGGGCAATCCGCTCGGACAAGCCTTCAAGGTAATTGGCCAGCGCCCCATGAGACACCGCGACCCCCTTGGGCATACCGGTGGTGCCCGAGGTGTAGATCACATAAGCCAGGTTGCCGGAGTGAAcc < 2:353782/231‑1 (MQ=255) agcagATGTACCGTCTTGCCGGCCCAGAGCGCGCCAAACAGCATGGTATGGCCAAgg > 2:622068/1‑57 (MQ=255) tACCGTCTTGCCGGCCCAGAGCGCGCCAAACAGCATGGTATGCCCAAGGTCGGCGGCAGGCGTGGAGACCATGGCGAAGTGTTCCAGATCGCCAAGGGCAATCCGCTCGGACAAGCCTTCAAGGTAATTGGCCAGCGCCCCATGAGACACcgcg < 1:546430/154‑1 (MQ=255) ccGTCTTGCCGGCCCAGAGCGCGCCAAACAGCATGGTATGCCCAAGGTCGGCGGCAGGCGTGGAGACCATGGCGAAGTGTTCCAGATCGCCAAGGGCAATCCGCTCGGACAAGCCTTCAAGGTAATTGGCCAGCGCCCCATGAGACACCGCGACCCCCTTGGGCATACCGGTGGTGCCCGAGGTGTAGATCACATAAGCCAGGTTGCCGGAGTGAACCGCCACGGGCACCCCTGc < 1:703913/235‑1 (MQ=255) ggcTTGGCGGCCGAGGGCGCGCCACACAGCATGGTATGCCCAAGGTcggcgg < 2:43139/50‑1 (MQ=255) ttGCCGGCCCAGAGCGCGCCAAACAGCATGGTATGCCCAAGGTCGGCGGCAGGCGTGGAGACCATGGCGAAGTGTTCCAGATCGCCAAGGGCAATCCGCTCGGACAAGCCTTCAAGGTAATTGGCCAgc > 2:801267/1‑129 (MQ=255) ccGGCCCAGAGCGCGCCAAACAGCATGGTATGCCCAAGGTCGGCGGCAGGCGTGGAGACCATGGCGAAGTGTTCCAGATCGCCAAGGGCAATCCGCTCGGACAAGCCTTCAAGGTAATTGGCCAGCGCCCCATGAGACACCGCGACCCCCTTGGGCATACCGGTGGTGc < 2:762091/169‑1 (MQ=255) gagCGCGCCAAACAGCATGGTATGCCCAAGGTCGGCGGCAGGCGTGGAGACCATGGCGAAGTGTTCCAGATCGCCAAGGGCAATCCGCTCGGACAAGCCTTCAAGGTAATTGGCCAGCGCCCCATGAGACACCGCGACCCCCTTGGGCATACCGGTGGTGCCCGAGGTGTAGATCACATAAGCCAGGTTGCCGGAGTGAACCGCCACGGGCACCCCTGCCTCGCCACCTGCCGCGt < 1:905376/236‑1 (MQ=255) gcgcgcCAAACAGCATGGTATGCCCAAGGTCGGCGGCAGGCGTGGAGACCATGGCGAAGTGTTCCAGATCGCCAAGGGCAATCCGCTCGGACAAGCCTTCAAGGTAATTGGCCAGCGCCCCATGAGACACCGCGACCCCCTTGGGCATACCGGCGGTGCCCGAGGTGGAGAt > 2:311882/1‑172 (MQ=255) aaaCAGCATGGTATGCCCAAGGTCGGCGGCAGGCGTGGAGACCATGGCGAAGTGTTCCAGATCGCCAAGGGCAATCCGCTCGGACAAGCCTTCAAGGTAATTGGCCAGCGCCCCATGAGACACCGCGACCCCCTTGGGCATACCGGTGGTGCCCGAGGTGTAGATCACATAAGCCAGGTTGCCGGAGTGAACCGCCACGGGCACCCCTGCCTCg > 1:466491/1‑214 (MQ=255) aGCAGGGTATGCCCAAGGTCGGCGGCAGGCGTGGAGACCATGGCGAAGTGTTCTAGATCGCCAAGGGCAATCCGCTCGGACAAGCCTTCAAGGTAATTGGCCAGCGCCCCATGAGACACCGCGACCCCCTTGGGCATACCGGTGGTGCCCGAg < 2:13668/153‑1 (MQ=255) gCATGGTATGCCCAAGGTCGGCGGCAGGCGTGGAGACCATGGCGAAGTGTTCCAGATCGCCAAGGGCAATCCGCTCGGACAAGCCTTCAAGGTAATTGGCCAGCGCCCCATGAGACACCGCGACCCCCTTGGGCATACCGGTGGTGCCCGAGGTGTAGATCACATAAGCCAGGTTGCCGGAGTGAACCGCCACGGGCACCCCTGCCTCGCCACCTGCCGCGTTCAGCGCCAGGCAc < 1:650531/236‑1 (MQ=255) | CGATACGCGCCAGCAGTGCCGGCGGGCAGGCCTCGCCGCCAAGCACCAGGCAACGCTGCGGCAGCACGCTGGCATCGGCGCAGGCATCGAGCAGCGCACCCAGGTGCGAAGGCACGATTTTCAGCGCATCGACGTGGTTTGCCGACAGGTAGGCGGCGAAACCGTCGGCATCGAGCACCGCCTCGCGCTGCAGCAGATGTACCGTCTTGCCGGCCCAGAGCGCGCCAAACAGCATGGTATGCCCAAGGTCGGCGGCAGGCGTGGAGACCATGGCGAAGTGTTCCAGATCGCCAAGGGCAATCCGCTCGGACAAGCCTTCAAGGTAATTGGCCAGCGCCCCATGAGACACCGCGACCCCCTTGGGCATACCGGTGGTGCCCGAGGTGTAGATCACATAAGCCAGGTTGCCGGAGTGAACCGCCACGGGCACCCCTGCCTCGCCACCTGCCGCGTTCAGCGCCAGGCAC > AE015451/4791517‑4791983 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |